RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 NUTM1Q86Y26 1132 aa10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 TEX11Q8IYF3 940 aa10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 SRRTQ9BXP5 876 aaKnown RBP10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 PDRG1Q9NUG6 133 aa10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 ETAA1Q9NY74 926 aa10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 POLR3AO14802 1390 aaPredicted RBP10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 NPHP1O15259 732 aa10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 NEFHP12036 1026 aa10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 HNRNPH1P31943 449 aaKnown RBP10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 ELF1P32519 619 aa10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 MTA1Q13330 715 aa10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 NUTM2DQ5VT03 806 aaPredicted RBP10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 MSL3Q8N5Y2 521 aaKnown RBP10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 ERCC4Q92889 916 aaPredicted RBP10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 UTP14AQ9BVJ6 771 aaKnown RBP10.38□□□□□ -0.75
CDC42BPA-206ENST00000429440 COQ9O75208 318 aa10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 SASH3O75995 380 aa10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 FOXD4L5Q5VV16 416 aaPredicted RBP10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 NAIF1Q69YI7 327 aaPredicted RBP10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 LRRC8AQ8IWT6 810 aa10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 ZNF513Q8N8E2 541 aaPredicted RBP10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 FOXD4L4Q8WXT5 416 aaPredicted RBP10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 VEZTQ9HBM0 779 aa10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 NRBP1Q9UHY1 535 aa10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 DIP2BQ9P265 1576 aa10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 ANKRD45Q5TZF3 282 aa10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 TTLL5Q6EMB2 1281 aa10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 CC2D1AQ6P1N0 951 aaPredicted RBP10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 CCAR2Q8N163 923 aaKnown RBP10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 TMX3Q96JJ7 454 aa10.37□□□□□ -0.75
CDC42BPA-206ENST00000429440 RPAP1Q9BWH6 1393 aaPredicted RBP10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 TMCO5BA8MYB1 307 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 NEBLO76041 1014 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 ERLIN2O94905 339 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 GCFC2P16383 781 aaKnown RBP10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 DDR1Q08345 913 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 CRYMQ14894 314 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 AP1ARQ63HQ0 302 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 ANKRD23Q86SG2 305 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 MICALL1Q8N3F8 863 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 RPS6KL1Q9Y6S9 549 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 ANKRD18BA2A2Z9 1011 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 USP27XA6NNY8 438 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 PPFIA4O75335 1185 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 GRIK3Q13003 919 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 GIMAP6Q6P9H5 292 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 SH3GL3Q99963 347 aa10.36□□□□□ -0.75
CDC42BPA-206ENST00000429440 RIMBP3CA6NJZ7 1639 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 RIMBP3BA6NNM3 1639 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 RIMBP3Q9UFD9 1639 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 EFCAB8A8MWE9 144 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 ICA1Q05084 483 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 CCDC27Q2M243 656 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 CCDC30Q5VVM6 783 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 TTC19Q6DKK2 380 aaPredicted RBP10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 BCL2L13Q9BXK5 485 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 TRIM6Q9C030 488 aaPredicted RBP10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 TRIM5Q9C035 493 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 GDPD2Q9HCC8 539 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 ARFGAP3Q9NP61 516 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 CLIP2Q9UDT6 1046 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 TRAF1Q13077 416 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 INTS3Q68E01 1043 aaKnown RBP10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 FOXR1Q6PIV2 292 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 MORC1Q86VD1 984 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 TDRD7Q8NHU6 1098 aaKnown RBP10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 FUT8Q9BYC5 575 aa10.35□□□□□ -0.75
CDC42BPA-206ENST00000429440 PTPRMP28827 1452 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 TCHHQ07283 1943 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 SKILP12757 684 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 RWDD2BP57060 319 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 KCNV1Q6PIU1 500 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 ITPRIPQ8IWB1 547 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 DDX11Q96FC9 970 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 PUS7Q96PZ0 661 aaKnown RBP10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 MCM8Q9UJA3 840 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 IQSEC2Q5JU85 1478 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 IPO8O15397 1037 aaKnown RBP10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 EIF3JO75822 258 aaKnown RBP10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 TRIM27P14373 513 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 GPTP24298 496 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 MRPL12P52815 198 aaKnown RBP10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 TBC1D8BQ0IIM8 1120 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 CYB5RLQ6IPT4 315 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 ATF7IPQ6VMQ6 1270 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 GPR161Q8N6U8 529 aaKnown RBP10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 CCDC26Q8TAB7 109 aa10.34□□□□□ -0.75
CDC42BPA-206ENST00000429440 MAP2K7O14733 419 aa10.33□□□□□ -0.76
CDC42BPA-206ENST00000429440 TADA3O75528 432 aa10.33□□□□□ -0.76
CDC42BPA-206ENST00000429440 SEC31AO94979 1220 aaKnown RBP10.33□□□□□ -0.76
CDC42BPA-206ENST00000429440 SNW1Q13573 536 aaKnown RBP10.33□□□□□ -0.76
CDC42BPA-206ENST00000429440 CWC27Q6UX04 472 aaKnown RBP10.33□□□□□ -0.76
CDC42BPA-206ENST00000429440 CTCFLQ8NI51 663 aaPredicted RBP10.33□□□□□ -0.76
CDC42BPA-206ENST00000429440 KAT2BQ92831 832 aa10.33□□□□□ -0.76
CDC42BPA-206ENST00000429440 PRDM16Q9HAZ2 1276 aa10.33□□□□□ -0.76
CDC42BPA-206ENST00000429440 KCNJ6P48051 423 aa10.33□□□□□ -0.76
CDC42BPA-206ENST00000429440 CCDC144BQ3MJ40 725 aa10.33□□□□□ -0.76
CDC42BPA-206ENST00000429440 LRRC31Q6UY01 552 aa10.33□□□□□ -0.76
CDC42BPA-206ENST00000429440 CCDC144CPQ8IYA2 1237 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms