RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 DMGDHQ9UI17 866 aaKnown RBP4.08□□□□□ -1.76
RGPD1-203ENST00000428128 TTF2Q9UNY4 1162 aaKnown RBP4.08□□□□□ -1.76
RGPD1-203ENST00000428128 AKAP12Q02952 1782 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 UBAP1LF5GYI3 381 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 IGHA2P01877 340 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 CALRP27797 417 aaKnown RBP4.08□□□□□ -1.76
RGPD1-203ENST00000428128 CTHP32929 405 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 EAPPQ56P03 285 aaPredicted RBP4.08□□□□□ -1.76
RGPD1-203ENST00000428128 RNPC3Q96LT9 517 aaKnown RBP4.08□□□□□ -1.76
RGPD1-203ENST00000428128 THRAP3Q9Y2W1 955 aaKnown RBP4.08□□□□□ -1.76
RGPD1-203ENST00000428128 TULP4Q9NRJ4 1543 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 NPHP4O75161 1426 aaPredicted RBP4.08□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L15C9J2P7 530 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L10C9JJH3 530 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L13C9JLJ4 530 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L12C9JPN9 530 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L11C9JVI0 530 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L21D6R901 530 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L18D6R9N7 530 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L22D6RA61 530 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L17D6RBQ6 530 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L19D6RCP7 530 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L20D6RJB6 530 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 CCER2I3L3R5 266 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 KIF3BO15066 747 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 OATP04181 439 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 PRR29P0C7W0 189 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 VAC14Q08AM6 782 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L24Q0WX57 530 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 FMNL3Q8IVF7 1028 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 PXYLP1Q8TE99 480 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 INO80BQ9C086 356 aaPredicted RBP4.08□□□□□ -1.76
RGPD1-203ENST00000428128 C12orf49Q9H741 205 aa4.08□□□□□ -1.76
RGPD1-203ENST00000428128 DDX41Q9UJV9 622 aaKnown RBP4.08□□□□□ -1.76
RGPD1-203ENST00000428128 ATP1B4Q9UN42 357 aaPredicted RBP4.08□□□□□ -1.76
RGPD1-203ENST00000428128 WDR78Q5VTH9 848 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 COL26A1Q96A83 441 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 ANO8Q9HCE9 1232 aaPredicted RBP4.07□□□□□ -1.76
RGPD1-203ENST00000428128 PPP1R1BQ9UD71 204 aaPredicted RBP4.07□□□□□ -1.76
RGPD1-203ENST00000428128 RRBP1Q9P2E9 1410 aaKnown RBP4.07□□□□□ -1.76
RGPD1-203ENST00000428128 KCNQ2O43526 872 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 P4HBP07237 508 aaKnown RBP4.07□□□□□ -1.76
RGPD1-203ENST00000428128 CD46P15529 392 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 GNALP38405 381 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 POU5F1Q01860 360 aaKnown RBP4.07□□□□□ -1.76
RGPD1-203ENST00000428128 OCLNQ16625 522 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 CCDC96Q2M329 555 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 KRT26Q7Z3Y9 468 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 RNF34Q969K3 372 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 TUBGCP6Q96RT7 1819 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 MYOM2P54296 1465 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 VIRMAQ69YN4 1812 aaKnown RBP4.07□□□□□ -1.76
RGPD1-203ENST00000428128 NOS2P35228 1153 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 HSPA2P54652 639 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 BIRC2Q13490 618 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 MAP9Q49MG5 647 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 ARSHQ5FYA8 562 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 KIAA0907Q7Z7F0 614 aaPredicted RBP4.07□□□□□ -1.76
RGPD1-203ENST00000428128 ANAPC4Q9UJX5 808 aa4.07□□□□□ -1.76
RGPD1-203ENST00000428128 ABCC5O15440 1437 aa4.06□□□□□ -1.76
RGPD1-203ENST00000428128 SHANK3Q9BYB0 1731 aa4.06□□□□□ -1.76
RGPD1-203ENST00000428128 TMEM94Q12767 1356 aa4.06□□□□□ -1.76
RGPD1-203ENST00000428128 C21orf2O43822 256 aa4.06□□□□□ -1.76
RGPD1-203ENST00000428128 VDRP11473 427 aa4.06□□□□□ -1.76
RGPD1-203ENST00000428128 GJA8P48165 433 aa4.06□□□□□ -1.76
RGPD1-203ENST00000428128 SECISBP2LQ93073 1101 aaKnown RBP4.06□□□□□ -1.76
RGPD1-203ENST00000428128 PGAP2Q9UHJ9 254 aa4.06□□□□□ -1.76
RGPD1-203ENST00000428128 NUB1Q9Y5A7 615 aa4.06□□□□□ -1.76
RGPD1-203ENST00000428128 AATKQ6ZMQ8 1374 aa4.06□□□□□ -1.76
RGPD1-203ENST00000428128 FAM163BP0C2L3 166 aa4.06□□□□□ -1.76
RGPD1-203ENST00000428128 ATP2B4P23634 1241 aa4.06□□□□□ -1.76
RGPD1-203ENST00000428128 DHX8Q14562 1220 aaKnown RBP4.06□□□□□ -1.76
RGPD1-203ENST00000428128 ZNF280DQ6N043 979 aa4.06□□□□□ -1.76
RGPD1-203ENST00000428128 FILIP1Q7Z7B0 1213 aa4.06□□□□□ -1.76
RGPD1-203ENST00000428128 MRPL42Q9Y6G3 142 aaKnown RBP4.06□□□□□ -1.76
RGPD1-203ENST00000428128 DHX29Q7Z478 1369 aaKnown RBP4.06□□□□□ -1.76
RGPD1-203ENST00000428128 TREHO43280 583 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 ZNF500O60304 480 aaPredicted RBP4.05□□□□□ -1.76
RGPD1-203ENST00000428128 PHF14O94880 888 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 POTEJP0CG39 1038 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 ZSCAN29Q8IWY8 852 aaPredicted RBP4.05□□□□□ -1.76
RGPD1-203ENST00000428128 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.05□□□□□ -1.76
RGPD1-203ENST00000428128 ALKBH8Q96BT7 664 aaKnown RBP4.05□□□□□ -1.76
RGPD1-203ENST00000428128 ZSWIM4Q9H7M6 989 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 ENAMQ9NRM1 1142 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.05□□□□□ -1.76
RGPD1-203ENST00000428128 TNRC6CQ9HCJ0 1690 aaKnown RBP4.05□□□□□ -1.76
RGPD1-203ENST00000428128 ARHGAP5Q13017 1502 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 HFM1A2PYH4 1435 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 TNFRSF10BO14763 440 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 S100BP04271 92 aaPredicted RBP4.05□□□□□ -1.76
RGPD1-203ENST00000428128 PTMAP06454 111 aaKnown RBP4.05□□□□□ -1.76
RGPD1-203ENST00000428128 POU3F3P20264 500 aaPredicted RBP4.05□□□□□ -1.76
RGPD1-203ENST00000428128 NFE2Q16621 373 aaPredicted RBP4.05□□□□□ -1.76
RGPD1-203ENST00000428128 QPCTQ16769 361 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 POTEEQ6S8J3 1075 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 RUNDC1Q96C34 613 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 ACBD3Q9H3P7 528 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 SRA1Q9HD15 236 aaKnown RBP4.05□□□□□ -1.76
RGPD1-203ENST00000428128 ADGRG1Q9Y653 693 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms