RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 USP17L13C9JLJ4 530 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 USP17L12C9JPN9 530 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 USP17L11C9JVI0 530 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 USP17L21D6R901 530 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 USP17L18D6R9N7 530 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 USP17L22D6RA61 530 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 USP17L17D6RBQ6 530 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 USP17L19D6RCP7 530 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 USP17L20D6RJB6 530 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 USP17L24Q0WX57 530 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 DPYDQ12882 1025 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 CHMP7Q8WUX9 453 aaPredicted RBP10.47□□□□□ -0.73
C9orf3-205ENST00000427193 PLVAPQ9BX97 442 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 VRTNQ9H8Y1 702 aa10.47□□□□□ -0.73
C9orf3-205ENST00000427193 SPDYE3A6NKU9 549 aa10.46□□□□□ -0.73
C9orf3-205ENST00000427193 IGFBP4P22692 258 aa10.46□□□□□ -0.73
C9orf3-205ENST00000427193 LMOD1P29536 600 aaPredicted RBP10.46□□□□□ -0.73
C9orf3-205ENST00000427193 BTLAQ7Z6A9 289 aa10.46□□□□□ -0.73
C9orf3-205ENST00000427193 CD163Q86VB7 1156 aa10.46□□□□□ -0.73
C9orf3-205ENST00000427193 ANKMY2Q8IV38 441 aa10.46□□□□□ -0.73
C9orf3-205ENST00000427193 SPATA31C1P0DKV0 1188 aa10.45□□□□□ -0.74
C9orf3-205ENST00000427193 ADH7P40394 386 aa10.45□□□□□ -0.74
C9orf3-205ENST00000427193 RTN1Q16799 776 aa10.45□□□□□ -0.74
C9orf3-205ENST00000427193 IER5Q5VY09 327 aa10.45□□□□□ -0.74
C9orf3-205ENST00000427193 NGLY1Q96IV0 654 aa10.45□□□□□ -0.74
C9orf3-205ENST00000427193 PRDM6Q9NQX0 595 aa10.45□□□□□ -0.74
C9orf3-205ENST00000427193 CHRNA4P43681 627 aa10.44□□□□□ -0.74
C9orf3-205ENST00000427193 RAB44Q7Z6P3 723 aaPredicted RBP10.44□□□□□ -0.74
C9orf3-205ENST00000427193 EFCC1Q9HA90 598 aa10.44□□□□□ -0.74
C9orf3-205ENST00000427193 K7ELQ4 463 aaPredicted RBP10.43□□□□□ -0.74
C9orf3-205ENST00000427193 M0R082 166 aa10.43□□□□□ -0.74
C9orf3-205ENST00000427193 ZNF417Q8TAU3 575 aa10.43□□□□□ -0.74
C9orf3-205ENST00000427193 ZNF587Q96SQ5 575 aaPredicted RBP10.43□□□□□ -0.74
C9orf3-205ENST00000427193 BHMTQ93088 406 aa10.42□□□□□ -0.74
C9orf3-205ENST00000427193 STARD13Q9Y3M8 1113 aa10.42□□□□□ -0.74
C9orf3-205ENST00000427193 TGFBR3LH3BV60 316 aa10.41□□□□□ -0.74
C9orf3-205ENST00000427193 ALBP02768 609 aa10.41□□□□□ -0.74
C9orf3-205ENST00000427193 PRRT3Q5FWE3 981 aa10.41□□□□□ -0.74
C9orf3-205ENST00000427193 MICALL1Q8N3F8 863 aa10.41□□□□□ -0.74
C9orf3-205ENST00000427193 ARXQ96QS3 562 aa10.4□□□□□ -0.74
C9orf3-205ENST00000427193 COL9A3Q14050 684 aaPredicted RBP10.39□□□□□ -0.75
C9orf3-205ENST00000427193 CFAP70Q5T0N1 1121 aa10.39□□□□□ -0.75
C9orf3-205ENST00000427193 FOXO3O43524 673 aa10.38□□□□□ -0.75
C9orf3-205ENST00000427193 LGR5O75473 907 aa10.38□□□□□ -0.75
C9orf3-205ENST00000427193 FURINP09958 794 aa10.38□□□□□ -0.75
C9orf3-205ENST00000427193 C20orf204Q6ZNR8 217 aa10.38□□□□□ -0.75
C9orf3-205ENST00000427193 DMGDHQ9UI17 866 aaKnown RBP10.38□□□□□ -0.75
C9orf3-205ENST00000427193 EPB42P16452 691 aa10.37□□□□□ -0.75
C9orf3-205ENST00000427193 WEE1P30291 646 aa10.37□□□□□ -0.75
C9orf3-205ENST00000427193 GSX2Q9BZM3 304 aa10.37□□□□□ -0.75
C9orf3-205ENST00000427193 UBE2OQ9C0C9 1292 aaKnown RBP10.37□□□□□ -0.75
C9orf3-205ENST00000427193 BCS1LQ9Y276 419 aa10.37□□□□□ -0.75
C9orf3-205ENST00000427193 NID1P14543 1247 aa10.36□□□□□ -0.75
C9orf3-205ENST00000427193 C8orf86Q6ZUL3 223 aa10.36□□□□□ -0.75
C9orf3-205ENST00000427193 PNMA5Q96PV4 448 aa10.36□□□□□ -0.75
C9orf3-205ENST00000427193 ZNF777Q9ULD5 760 aaPredicted RBP10.36□□□□□ -0.75
C9orf3-205ENST00000427193 LILRB5O75023 590 aa10.35□□□□□ -0.75
C9orf3-205ENST00000427193 GATA4P43694 442 aa10.35□□□□□ -0.75
C9orf3-205ENST00000427193 CCINQ13939 588 aa10.35□□□□□ -0.75
C9orf3-205ENST00000427193 FAM200AQ8TCP9 573 aa10.35□□□□□ -0.75
C9orf3-205ENST00000427193 SLC6A14Q9UN76 642 aa10.35□□□□□ -0.75
C9orf3-205ENST00000427193 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.35□□□□□ -0.75
C9orf3-205ENST00000427193 SCRIBQ14160 1630 aa10.35□□□□□ -0.75
C9orf3-205ENST00000427193 ERCC6Q03468 1493 aa10.35□□□□□ -0.75
C9orf3-205ENST00000427193 APBA3O96018 575 aa10.34□□□□□ -0.75
C9orf3-205ENST00000427193 TBC1D8BQ0IIM8 1120 aa10.34□□□□□ -0.75
C9orf3-205ENST00000427193 TRIM28Q13263 835 aaKnown RBP10.34□□□□□ -0.75
C9orf3-205ENST00000427193 VTI1AQ96AJ9 217 aa10.34□□□□□ -0.75
C9orf3-205ENST00000427193 KLK14Q9P0G3 267 aa10.34□□□□□ -0.75
C9orf3-205ENST00000427193 IDH3AP50213 366 aa10.33□□□□□ -0.76
C9orf3-205ENST00000427193 MYO19Q96H55 970 aa10.33□□□□□ -0.76
C9orf3-205ENST00000427193 NACC1Q96RE7 527 aa10.33□□□□□ -0.76
C9orf3-205ENST00000427193 IGFLR1Q9H665 355 aa10.33□□□□□ -0.76
C9orf3-205ENST00000427193 QTRT2Q9H974 415 aaKnown RBP10.33□□□□□ -0.76
C9orf3-205ENST00000427193 C11orf16Q9NQ32 467 aa10.33□□□□□ -0.76
C9orf3-205ENST00000427193 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.33□□□□□ -0.76
C9orf3-205ENST00000427193 NFKB1P19838 968 aa10.32□□□□□ -0.76
C9orf3-205ENST00000427193 RFX1P22670 979 aa10.32□□□□□ -0.76
C9orf3-205ENST00000427193 INPP5BP32019 993 aa10.32□□□□□ -0.76
C9orf3-205ENST00000427193 DGKZQ13574 1117 aa10.32□□□□□ -0.76
C9orf3-205ENST00000427193 DNAJB12Q9NXW2 375 aaKnown RBP10.32□□□□□ -0.76
C9orf3-205ENST00000427193 ARSDP51689 593 aa10.31□□□□□ -0.76
C9orf3-205ENST00000427193 C11orf91Q3C1V1 193 aa10.31□□□□□ -0.76
C9orf3-205ENST00000427193 FAM229AH3BQW9 127 aa10.3□□□□□ -0.76
C9orf3-205ENST00000427193 GRNP28799 593 aaKnown RBP10.3□□□□□ -0.76
C9orf3-205ENST00000427193 DOC2BQ14184 412 aa10.3□□□□□ -0.76
C9orf3-205ENST00000427193 PCSK7Q16549 785 aa10.3□□□□□ -0.76
C9orf3-205ENST00000427193 JPH1Q9HDC5 661 aaPredicted RBP10.3□□□□□ -0.76
C9orf3-205ENST00000427193 NOVA2Q9UNW9 492 aaKnown RBP10.3□□□□□ -0.76
C9orf3-205ENST00000427193 MAP3K6O95382 1288 aa10.29□□□□□ -0.76
C9orf3-205ENST00000427193 TRAPPC3LQ5T215 181 aa10.29□□□□□ -0.76
C9orf3-205ENST00000427193 MICAL2O94851 1124 aa10.28□□□□□ -0.76
C9orf3-205ENST00000427193 SWI5Q1ZZU3 235 aa10.28□□□□□ -0.76
C9orf3-205ENST00000427193 CDCA8Q53HL2 280 aa10.28□□□□□ -0.76
C9orf3-205ENST00000427193 PSAPL1Q6NUJ1 521 aa10.28□□□□□ -0.76
C9orf3-205ENST00000427193 NUDT8Q8WV74 236 aa10.27□□□□□ -0.77
C9orf3-205ENST00000427193 NAGPAQ9UK23 515 aa10.27□□□□□ -0.77
C9orf3-205ENST00000427193 A0A0A0MRY4 1105 aa10.26□□□□□ -0.77
C9orf3-205ENST00000427193 ELOAQ14241 798 aaKnown RBP10.26□□□□□ -0.77
C9orf3-205ENST00000427193 GRIK4Q16099 956 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms