RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 ST5P78524 1137 aa27.5■■□□□ 1.99
RPUSD3-205ENST00000427174 PPP1R42Q7Z4L9 355 aa27.5■■□□□ 1.99
RPUSD3-205ENST00000427174 KLRG2A4D1S0 409 aaPredicted RBP27.49■■□□□ 1.99
RPUSD3-205ENST00000427174 FKBP5Q13451 457 aaPredicted RBP27.49■■□□□ 1.99
RPUSD3-205ENST00000427174 MYD88Q99836 296 aa27.49■■□□□ 1.99
RPUSD3-205ENST00000427174 CACNA1SQ13698 1873 aa27.49■■□□□ 1.99
RPUSD3-205ENST00000427174 CHRNA5P30532 468 aa27.48■■□□□ 1.99
RPUSD3-205ENST00000427174 ERFEQ4G0M1 354 aa27.48■■□□□ 1.99
RPUSD3-205ENST00000427174 NUTM1Q86Y26 1132 aa27.48■■□□□ 1.99
RPUSD3-205ENST00000427174 UTP14AQ9BVJ6 771 aaKnown RBP27.48■■□□□ 1.99
RPUSD3-205ENST00000427174 IGKV5-2P06315 115 aa27.47■■□□□ 1.99
RPUSD3-205ENST00000427174 PDE6BP35913 854 aa27.47■■□□□ 1.99
RPUSD3-205ENST00000427174 RARSP54136 660 aaKnown RBP27.47■■□□□ 1.99
RPUSD3-205ENST00000427174 BRPF1P55201 1214 aaPredicted RBP27.47■■□□□ 1.99
RPUSD3-205ENST00000427174 DNAAF4Q8WXU2 420 aa27.46■■□□□ 1.99
RPUSD3-205ENST00000427174 PDZRN3Q9UPQ7 1066 aa27.46■■□□□ 1.99
RPUSD3-205ENST00000427174 NPHP1O15259 732 aa27.45■■□□□ 1.98
RPUSD3-205ENST00000427174 SLC10A5Q5PT55 438 aa27.45■■□□□ 1.98
RPUSD3-205ENST00000427174 CCDC191Q8NCU4 936 aa27.45■■□□□ 1.98
RPUSD3-205ENST00000427174 BCL2L13Q9BXK5 485 aa27.45■■□□□ 1.98
RPUSD3-205ENST00000427174 SYNE4Q8N205 404 aa27.44■■□□□ 1.98
RPUSD3-205ENST00000427174 SMC4Q9NTJ3 1288 aa27.44■■□□□ 1.98
RPUSD3-205ENST00000427174 TRMT112Q9UI30 125 aaKnown RBP27.44■■□□□ 1.98
RPUSD3-205ENST00000427174 MYH3P11055 1940 aa27.43■■□□□ 1.98
RPUSD3-205ENST00000427174 GTF2E1P29083 439 aaPredicted RBP27.43■■□□□ 1.98
RPUSD3-205ENST00000427174 C2CD5Q86YS7 1000 aa27.43■■□□□ 1.98
RPUSD3-205ENST00000427174 PTPRCP08575 1304 aa27.42■■□□□ 1.98
RPUSD3-205ENST00000427174 SLX4Q8IY92 1834 aa27.42■■□□□ 1.98
RPUSD3-205ENST00000427174 F6X3S4 739 aa27.42■■□□□ 1.98
RPUSD3-205ENST00000427174 H0YIN7 160 aa27.42■■□□□ 1.98
RPUSD3-205ENST00000427174 SRGNP10124 158 aa27.42■■□□□ 1.98
RPUSD3-205ENST00000427174 YBX3P16989 372 aaKnown RBP eCLIP27.42■■□□□ 1.987e-7■■□□□ 12.7
RPUSD3-205ENST00000427174 SH3TC1Q8TE82 1336 aa27.41■■□□□ 1.98
RPUSD3-205ENST00000427174 NEURL1BA8MQ27 555 aa27.41■■□□□ 1.98
RPUSD3-205ENST00000427174 NEXNQ0ZGT2 675 aa27.41■■□□□ 1.98
RPUSD3-205ENST00000427174 CRY2Q49AN0 593 aa27.41■■□□□ 1.98
RPUSD3-205ENST00000427174 CWC25Q9NXE8 425 aaPredicted RBP27.41■■□□□ 1.98
RPUSD3-205ENST00000427174 PIM2Q9P1W9 311 aa27.41■■□□□ 1.98
RPUSD3-205ENST00000427174 CHD4Q14839 1912 aa27.4■■□□□ 1.98
RPUSD3-205ENST00000427174 CWF19L2Q2TBE0 894 aaKnown RBP27.4■■□□□ 1.98
RPUSD3-205ENST00000427174 LINS1Q8NG48 757 aa27.4■■□□□ 1.98
RPUSD3-205ENST00000427174 BEND3Q5T5X7 828 aa27.39■■□□□ 1.98
RPUSD3-205ENST00000427174 C3orf67Q6ZVT6 689 aa27.39■■□□□ 1.98
RPUSD3-205ENST00000427174 ZBTB38Q8NAP3 1195 aaPredicted RBP27.39■■□□□ 1.98
RPUSD3-205ENST00000427174 FAM89AQ96GI7 184 aa27.39■■□□□ 1.98
RPUSD3-205ENST00000427174 TAF1P21675 1872 aa27.38■■□□□ 1.97
RPUSD3-205ENST00000427174 PCCAP05165 728 aaPredicted RBP27.38■■□□□ 1.97
RPUSD3-205ENST00000427174 STYK1Q6J9G0 422 aa27.37■■□□□ 1.97
RPUSD3-205ENST00000427174 MASTLQ96GX5 879 aa27.37■■□□□ 1.97
RPUSD3-205ENST00000427174 WWC3Q9ULE0 1092 aa27.37■■□□□ 1.97
RPUSD3-205ENST00000427174 HCLS1P14317 486 aaPredicted RBP27.36■■□□□ 1.97
RPUSD3-205ENST00000427174 GCKRQ14397 625 aa27.36■■□□□ 1.97
RPUSD3-205ENST00000427174 GPR162Q16538 588 aa27.36■■□□□ 1.97
RPUSD3-205ENST00000427174 NPR1P16066 1061 aa27.35■■□□□ 1.97
RPUSD3-205ENST00000427174 DALRD3Q5D0E6 543 aaKnown RBP27.35■■□□□ 1.97
RPUSD3-205ENST00000427174 BCAR3O75815 825 aa27.34■■□□□ 1.97
RPUSD3-205ENST00000427174 HOXA10P31260 410 aaPredicted RBP27.34■■□□□ 1.97
RPUSD3-205ENST00000427174 TTLL6Q8N841 843 aa27.34■■□□□ 1.97
RPUSD3-205ENST00000427174 NLRP3Q96P20 1036 aa27.34■■□□□ 1.97
RPUSD3-205ENST00000427174 NOB1Q9ULX3 412 aaKnown RBP27.34■■□□□ 1.97
RPUSD3-205ENST00000427174 BCS1LQ9Y276 419 aa27.34■■□□□ 1.97
RPUSD3-205ENST00000427174 KIF16BQ96L93 1317 aa27.34■■□□□ 1.97
RPUSD3-205ENST00000427174 CDHR2Q9BYE9 1310 aa27.34■■□□□ 1.97
RPUSD3-205ENST00000427174 H7C1W4 665 aa27.33■■□□□ 1.97
RPUSD3-205ENST00000427174 PELP1Q8IZL8 1130 aaKnown RBP27.33■■□□□ 1.97
RPUSD3-205ENST00000427174 FER1L6Q2WGJ9 1857 aa27.33■■□□□ 1.97
RPUSD3-205ENST00000427174 IRS4O14654 1257 aaPredicted RBP27.32■■□□□ 1.96
RPUSD3-205ENST00000427174 CASP7P55210 303 aa27.32■■□□□ 1.96
RPUSD3-205ENST00000427174 RTL5Q5HYW3 569 aaPredicted RBP27.32■■□□□ 1.96
RPUSD3-205ENST00000427174 ARHGAP45Q92619 1136 aa27.32■■□□□ 1.96
RPUSD3-205ENST00000427174 ZNF622Q969S3 477 aaKnown RBP eCLIP27.32■■□□□ 1.96
RPUSD3-205ENST00000427174 DCAF8L1A6NGE4 600 aa27.31■■□□□ 1.96
RPUSD3-205ENST00000427174 ALDH1L1O75891 902 aa27.31■■□□□ 1.96
RPUSD3-205ENST00000427174 JARID2Q92833 1246 aaPredicted RBP27.31■■□□□ 1.96
RPUSD3-205ENST00000427174 CNKSR1Q969H4 720 aa27.31■■□□□ 1.96
RPUSD3-205ENST00000427174 SBF1O95248 1867 aa27.31■■□□□ 1.96
RPUSD3-205ENST00000427174 GRIN3BO60391 1043 aa27.3■■□□□ 1.96
RPUSD3-205ENST00000427174 SF3B3Q15393 1217 aaKnown RBP27.3■■□□□ 1.96
RPUSD3-205ENST00000427174 SLC4A10Q6U841 1118 aa27.3■■□□□ 1.96
RPUSD3-205ENST00000427174 YTHDC1Q96MU7 727 aaKnown RBP27.29■■□□□ 1.96
RPUSD3-205ENST00000427174 SRCIN1Q9C0H9 1055 aa27.29■■□□□ 1.96
RPUSD3-205ENST00000427174 COL4A1P02462 1669 aa27.29■■□□□ 1.96
RPUSD3-205ENST00000427174 PRPF40BQ6NWY9 871 aaKnown RBP27.28■■□□□ 1.96
RPUSD3-205ENST00000427174 UBE3BQ7Z3V4 1068 aa27.28■■□□□ 1.96
RPUSD3-205ENST00000427174 CRAMP1Q96RY5 1269 aa27.28■■□□□ 1.96
RPUSD3-205ENST00000427174 API5Q9BZZ5 524 aaKnown RBP27.28■■□□□ 1.96
RPUSD3-205ENST00000427174 CCDC88AQ3V6T2 1871 aa27.27■■□□□ 1.96
RPUSD3-205ENST00000427174 ALDH1B1P30837 517 aa27.27■■□□□ 1.96
RPUSD3-205ENST00000427174 C7orf43Q8WVR3 580 aa27.27■■□□□ 1.96
RPUSD3-205ENST00000427174 RPGRQ92834 1020 aaKnown RBP27.27■■□□□ 1.96
RPUSD3-205ENST00000427174 PDE8AO60658 829 aa27.26■■□□□ 1.95
RPUSD3-205ENST00000427174 HSP90B1P14625 803 aaKnown RBP27.26■■□□□ 1.95
RPUSD3-205ENST00000427174 PLA2G12BQ9BX93 195 aa27.26■■□□□ 1.95
RPUSD3-205ENST00000427174 UTYO14607 1347 aa27.25■■□□□ 1.95
RPUSD3-205ENST00000427174 ABCC4O15439 1325 aa27.25■■□□□ 1.95
RPUSD3-205ENST00000427174 RBM17Q96I25 401 aaKnown RBP27.25■■□□□ 1.95
RPUSD3-205ENST00000427174 LRRC37AA6NMS7 1700 aa27.24■■□□□ 1.95
RPUSD3-205ENST00000427174 GRM8O00222 908 aa27.24■■□□□ 1.95
RPUSD3-205ENST00000427174 SNED1Q8TER0 1413 aa27.24■■□□□ 1.95
RPUSD3-205ENST00000427174 IPO8O15397 1037 aaKnown RBP27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms