RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ZNF804AQ7Z570 1209 aa16.25■□□□□ 0.19
RPL28-202ENST00000426763 METP08581 1390 aa16.25■□□□□ 0.19
RPL28-202ENST00000426763 TBC1D9Q6ZT07 1266 aa16.25■□□□□ 0.19
RPL28-202ENST00000426763 HMG20BQ9P0W2 317 aa16.25■□□□□ 0.19
RPL28-202ENST00000426763 SMC2O95347 1197 aa16.25■□□□□ 0.19
RPL28-202ENST00000426763 CCDC192P0DO97 292 aa16.25■□□□□ 0.19
RPL28-202ENST00000426763 SBNO2Q9Y2G9 1366 aa16.25■□□□□ 0.19
RPL28-202ENST00000426763 GOLGA8AA7E2F4 631 aa16.25■□□□□ 0.19
RPL28-202ENST00000426763 GOLGA8BA8MQT2 603 aa16.25■□□□□ 0.19
RPL28-202ENST00000426763 HMGN5P82970 282 aaKnown RBP16.25■□□□□ 0.19
RPL28-202ENST00000426763 TSHZ3Q63HK5 1081 aa16.25■□□□□ 0.19
RPL28-202ENST00000426763 CABP5Q9NP86 173 aa16.25■□□□□ 0.19
RPL28-202ENST00000426763 LIMCH1Q9UPQ0 1083 aa16.24■□□□□ 0.19
RPL28-202ENST00000426763 MFSD6Q6ZSS7 791 aa16.24■□□□□ 0.19
RPL28-202ENST00000426763 HDAC9Q9UKV0 1011 aa16.24■□□□□ 0.19
RPL28-202ENST00000426763 SSBP05455 408 aaKnown RBP eCLIP16.24■□□□□ 0.19
RPL28-202ENST00000426763 KDM5AP29375 1690 aaKnown RBP16.23■□□□□ 0.19
RPL28-202ENST00000426763 TNIP1Q15025 636 aa16.23■□□□□ 0.19
RPL28-202ENST00000426763 MYOM2P54296 1465 aa16.23■□□□□ 0.19
RPL28-202ENST00000426763 C8orf76Q96K31 380 aa16.23■□□□□ 0.19
RPL28-202ENST00000426763 TSPY2A6NKD2 308 aa16.23■□□□□ 0.19
RPL28-202ENST00000426763 PLBD2Q8NHP8 589 aa16.23■□□□□ 0.19
RPL28-202ENST00000426763 PARP10Q53GL7 1025 aa16.23■□□□□ 0.19
RPL28-202ENST00000426763 ODF2Q5BJF6 829 aa16.23■□□□□ 0.19
RPL28-202ENST00000426763 SKAP1Q86WV1 359 aa16.23■□□□□ 0.19
RPL28-202ENST00000426763 PHAXQ9H814 394 aaKnown RBP16.23■□□□□ 0.19
RPL28-202ENST00000426763 CYP7A1P22680 504 aa16.22■□□□□ 0.19
RPL28-202ENST00000426763 SSRP1Q08945 709 aaKnown RBP16.22■□□□□ 0.19
RPL28-202ENST00000426763 PDE1AP54750 535 aa16.22■□□□□ 0.19
RPL28-202ENST00000426763 NCOA7Q8NI08 942 aa16.22■□□□□ 0.19
RPL28-202ENST00000426763 SMARCE1Q969G3 411 aa16.22■□□□□ 0.19
RPL28-202ENST00000426763 ANKRD2Q9GZV1 360 aa16.22■□□□□ 0.19
RPL28-202ENST00000426763 STK32BQ9NY57 414 aa16.22■□□□□ 0.19
RPL28-202ENST00000426763 PCDHB15Q9Y5E8 787 aa16.22■□□□□ 0.19
RPL28-202ENST00000426763 CEP57L1Q8IYX8 460 aa16.22■□□□□ 0.19
RPL28-202ENST00000426763 CUL5Q93034 780 aa16.22■□□□□ 0.19
RPL28-202ENST00000426763 KIF5BP33176 963 aa16.22■□□□□ 0.19
RPL28-202ENST00000426763 TMEM67Q5HYA8 995 aa16.22■□□□□ 0.19
RPL28-202ENST00000426763 FEZ1Q99689 392 aa16.22■□□□□ 0.19
RPL28-202ENST00000426763 PRIM1P49642 420 aaKnown RBP16.21■□□□□ 0.19
RPL28-202ENST00000426763 LGR6Q9HBX8 967 aa16.21■□□□□ 0.19
RPL28-202ENST00000426763 SHROOM2Q13796 1616 aa16.21■□□□□ 0.19
RPL28-202ENST00000426763 PA2G4Q9UQ80 394 aaKnown RBP16.21■□□□□ 0.19
RPL28-202ENST00000426763 NEK1Q96PY6 1258 aa16.21■□□□□ 0.19
RPL28-202ENST00000426763 ZC3H12CQ9C0D7 883 aaKnown RBP16.21■□□□□ 0.19
RPL28-202ENST00000426763 ARAP3Q8WWN8 1544 aa16.21■□□□□ 0.19
RPL28-202ENST00000426763 CCDC39Q9UFE4 941 aa16.21■□□□□ 0.18
RPL28-202ENST00000426763 CHL1O00533 1208 aa16.2■□□□□ 0.18
RPL28-202ENST00000426763 HAND2P61296 217 aa16.2■□□□□ 0.18
RPL28-202ENST00000426763 NAA16Q6N069 864 aaPredicted RBP16.2■□□□□ 0.18
RPL28-202ENST00000426763 OGFOD1Q8N543 542 aa16.2■□□□□ 0.18
RPL28-202ENST00000426763 KAT14Q9H8E8 782 aa16.2■□□□□ 0.18
RPL28-202ENST00000426763 IQSEC3Q9UPP2 1182 aaPredicted RBP16.2■□□□□ 0.18
RPL28-202ENST00000426763 BRPF1P55201 1214 aaPredicted RBP16.2■□□□□ 0.18
RPL28-202ENST00000426763 KAT6BQ8WYB5 2073 aa16.2■□□□□ 0.18
RPL28-202ENST00000426763 CEP85Q6P2H3 762 aa16.2■□□□□ 0.18
RPL28-202ENST00000426763 FERMT3Q86UX7 667 aa16.2■□□□□ 0.18
RPL28-202ENST00000426763 CCDC82Q8N4S0 544 aa16.2■□□□□ 0.18
RPL28-202ENST00000426763 SPATA31E1Q6ZUB1 1445 aa16.2■□□□□ 0.18
RPL28-202ENST00000426763 EYA3Q99504 573 aa16.2■□□□□ 0.18
RPL28-202ENST00000426763 SDSP20132 328 aa16.19■□□□□ 0.18
RPL28-202ENST00000426763 CNBD1Q8NA66 436 aa16.19■□□□□ 0.18
RPL28-202ENST00000426763 METTL22Q9BUU2 404 aaPredicted RBP16.19■□□□□ 0.18
RPL28-202ENST00000426763 EHMT1Q9H9B1 1298 aa16.19■□□□□ 0.18
RPL28-202ENST00000426763 NSFL1CQ9UNZ2 370 aaKnown RBP16.19■□□□□ 0.18
RPL28-202ENST00000426763 TTC41PQ6P2S7 1318 aa16.19■□□□□ 0.18
RPL28-202ENST00000426763 RBM17Q96I25 401 aaKnown RBP16.19■□□□□ 0.18
RPL28-202ENST00000426763 SERPINC1P01008 464 aa16.19■□□□□ 0.18
RPL28-202ENST00000426763 IL27Q8NEV9 243 aa16.19■□□□□ 0.18
RPL28-202ENST00000426763 CCDC12Q8WUD4 166 aaPredicted RBP16.19■□□□□ 0.18
RPL28-202ENST00000426763 NUP62CLQ9H1M0 184 aa16.19■□□□□ 0.18
RPL28-202ENST00000426763 SYCP1Q15431 976 aa16.19■□□□□ 0.18
RPL28-202ENST00000426763 CCDC87Q9NVE4 849 aa16.19■□□□□ 0.18
RPL28-202ENST00000426763 ERVV-2B6SEH9 535 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 KDM5CP41229 1560 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 ABCC3O15438 1527 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 SLC4A4Q9Y6R1 1079 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 NLRP5P59047 1200 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 MCMDC2Q4G0Z9 681 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 CCDC178Q5BJE1 867 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 ARID3AQ99856 593 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 KRT23Q9C075 422 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 FAM135BQ49AJ0 1406 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 CCDC194A0A1B0GVG4 234 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 SLC9C2Q5TAH2 1124 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 CCDC191Q8NCU4 936 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 BICC1Q9H694 974 aaKnown RBP16.18■□□□□ 0.18
RPL28-202ENST00000426763 PAG1Q9NWQ8 432 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 SH3TC1Q8TE82 1336 aa16.18■□□□□ 0.18
RPL28-202ENST00000426763 DCTPP1Q9H773 170 aa16.17■□□□□ 0.18
RPL28-202ENST00000426763 CCT2P78371 535 aaKnown RBP16.17■□□□□ 0.18
RPL28-202ENST00000426763 PPP4R3BQ5MIZ7 849 aa16.17■□□□□ 0.18
RPL28-202ENST00000426763 SCAND2PQ9GZW5 306 aaPredicted RBP16.17■□□□□ 0.18
RPL28-202ENST00000426763 USP16Q9Y5T5 823 aa16.17■□□□□ 0.18
RPL28-202ENST00000426763 MCM5P33992 734 aa16.17■□□□□ 0.18
RPL28-202ENST00000426763 RAB34Q9BZG1 259 aa16.17■□□□□ 0.18
RPL28-202ENST00000426763 KIF1BO60333 1816 aa16.17■□□□□ 0.18
RPL28-202ENST00000426763 F8W031 263 aaPredicted RBP16.17■□□□□ 0.18
RPL28-202ENST00000426763 IARSP41252 1262 aaKnown RBP16.17■□□□□ 0.18
RPL28-202ENST00000426763 TRIM35Q9UPQ4 493 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms