RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 PTPRUQ92729 1446 aa3.56□□□□□ -1.84
LINC00407-201ENST00000426509 A0A1W2PP64 1363 aa3.56□□□□□ -1.84
LINC00407-201ENST00000426509 ABCC11Q96J66 1382 aa3.56□□□□□ -1.84
LINC00407-201ENST00000426509 NINLQ9Y2I6 1382 aa3.56□□□□□ -1.84
LINC00407-201ENST00000426509 EVC2Q86UK5 1308 aa3.56□□□□□ -1.84
LINC00407-201ENST00000426509 E9PSI1 815 aa3.56□□□□□ -1.84
LINC00407-201ENST00000426509 CTHP32929 405 aa3.56□□□□□ -1.84
LINC00407-201ENST00000426509 FAM182BQ5T319 152 aa3.56□□□□□ -1.84
LINC00407-201ENST00000426509 MORC1Q86VD1 984 aa3.56□□□□□ -1.84
LINC00407-201ENST00000426509 SKAP1Q86WV1 359 aa3.56□□□□□ -1.84
LINC00407-201ENST00000426509 NGEFQ8N5V2 710 aa3.56□□□□□ -1.84
LINC00407-201ENST00000426509 FOXJ1Q92949 421 aa3.56□□□□□ -1.84
LINC00407-201ENST00000426509 GJD4Q96KN9 370 aaPredicted RBP3.56□□□□□ -1.84
LINC00407-201ENST00000426509 C19orf44Q9H6X5 657 aa3.56□□□□□ -1.84
LINC00407-201ENST00000426509 NOP58Q9Y2X3 529 aaKnown RBP3.56□□□□□ -1.84
LINC00407-201ENST00000426509 MST1RQ04912 1400 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 RIMS2Q9UQ26 1411 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 CGNL1Q0VF96 1302 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 ATF3P18847 181 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 MTHFSP49914 203 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 MCM6Q14566 821 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 EZH2Q15910 746 aaKnown RBP3.55□□□□□ -1.84
LINC00407-201ENST00000426509 C14orf37Q86TY3 774 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 SEPT12Q8IYM1 358 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 MPNDQ8N594 471 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 EHBP1Q8NDI1 1231 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 LRRN4Q8WUT4 740 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 LRRC59Q96AG4 307 aaKnown RBP3.55□□□□□ -1.84
LINC00407-201ENST00000426509 RUNDC1Q96C34 613 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 BACH2Q9BYV9 841 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 STK17AQ9UEE5 414 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 GLI3P10071 1580 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 CDC42BPGQ6DT37 1551 aa3.55□□□□□ -1.84
LINC00407-201ENST00000426509 ADAMTS13Q76LX8 1427 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 KIF20BQ96Q89 1820 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 KNDC1Q76NI1 1749 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.54□□□□□ -1.84
LINC00407-201ENST00000426509 AXIN1O15169 862 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 BCAR3O75815 825 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 ALDH1A1P00352 501 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 VARSP26640 1264 aaKnown RBP3.54□□□□□ -1.84
LINC00407-201ENST00000426509 TNNT2P45379 298 aaPredicted RBP3.54□□□□□ -1.84
LINC00407-201ENST00000426509 SAFB2Q14151 953 aaKnown RBP eCLIP3.54□□□□□ -1.84
LINC00407-201ENST00000426509 CCDC27Q2M243 656 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 CTC1Q2NKJ3 1217 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 CENPQQ7L2Z9 268 aaPredicted RBP3.54□□□□□ -1.84
LINC00407-201ENST00000426509 SH3RF1Q7Z6J0 888 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 WWC1Q8IX03 1113 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 TCP11L2Q8N4U5 519 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 TSC1Q92574 1164 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 IPO9Q96P70 1041 aaKnown RBP3.54□□□□□ -1.84
LINC00407-201ENST00000426509 HMX1Q9NP08 348 aaPredicted RBP3.54□□□□□ -1.84
LINC00407-201ENST00000426509 STK26Q9P289 416 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 GMPR2Q9P2T1 348 aaKnown RBP3.54□□□□□ -1.84
LINC00407-201ENST00000426509 RRP7AQ9Y3A4 280 aaKnown RBP3.54□□□□□ -1.84
LINC00407-201ENST00000426509 TLL2Q9Y6L7 1015 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 ATP7BP35670 1465 aa3.54□□□□□ -1.84
LINC00407-201ENST00000426509 NCOA3Q9Y6Q9 1424 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 CAMTA1Q9Y6Y1 1673 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 FYB1O15117 783 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 AP1G2O75843 785 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 USP17L8P0C7I0 530 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 ANP32AP39687 249 aaKnown RBP3.53□□□□□ -1.84
LINC00407-201ENST00000426509 GRM5P41594 1212 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 SF3B2Q13435 895 aaKnown RBP3.53□□□□□ -1.84
LINC00407-201ENST00000426509 PDE3AQ14432 1141 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 SH3BP5LQ7L8J4 393 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 WDR63Q8IWG1 891 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.53□□□□□ -1.84
LINC00407-201ENST00000426509 MTMR14Q8NCE2 650 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 EPS8L1Q8TE68 723 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 CFAP53Q96M91 514 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 CDK15Q96Q40 435 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 PRAM1Q96QH2 718 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 PLEKHF1Q96S99 279 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 ORAI2Q96SN7 254 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 OCSTAMPQ9BR26 566 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 C1QTNF2Q9BXJ5 285 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 KLF16Q9BXK1 252 aaPredicted RBP3.53□□□□□ -1.84
LINC00407-201ENST00000426509 PDGFDQ9GZP0 370 aaPredicted RBP3.53□□□□□ -1.84
LINC00407-201ENST00000426509 GGNBP2Q9H3C7 697 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 SNRKQ9NRH2 765 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 TNNQ9UQP3 1299 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 TBX22Q9Y458 520 aa3.53□□□□□ -1.84
LINC00407-201ENST00000426509 TECPR2O15040 1411 aa3.53□□□□□ -1.85
LINC00407-201ENST00000426509 CPSF1Q10570 1443 aaKnown RBP3.53□□□□□ -1.85
LINC00407-201ENST00000426509 METP08581 1390 aa3.52□□□□□ -1.85
LINC00407-201ENST00000426509 PLEKHG1Q9ULL1 1385 aa3.52□□□□□ -1.85
LINC00407-201ENST00000426509 SOS2Q07890 1332 aaPredicted RBP3.52□□□□□ -1.85
LINC00407-201ENST00000426509 IGHDP01880 384 aa3.52□□□□□ -1.85
LINC00407-201ENST00000426509 RLBP1P12271 317 aa3.52□□□□□ -1.85
LINC00407-201ENST00000426509 BAG6P46379 1132 aa3.52□□□□□ -1.85
LINC00407-201ENST00000426509 RARSP54136 660 aaKnown RBP3.52□□□□□ -1.85
LINC00407-201ENST00000426509 SRPK2P78362 688 aaKnown RBP3.52□□□□□ -1.85
LINC00407-201ENST00000426509 XPCQ01831 940 aaPredicted RBP3.52□□□□□ -1.85
LINC00407-201ENST00000426509 NR6A1Q15406 480 aa3.52□□□□□ -1.85
LINC00407-201ENST00000426509 C8orf34Q49A92 452 aa3.52□□□□□ -1.85
LINC00407-201ENST00000426509 ERICH6Q7L0X2 663 aa3.52□□□□□ -1.85
LINC00407-201ENST00000426509 KRT27Q7Z3Y8 459 aa3.52□□□□□ -1.85
LINC00407-201ENST00000426509 TRIM46Q7Z4K8 759 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms