RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 FOSBP53539 338 aa9.16□□□□□ -0.94
CHCHD3P1-201ENST00000425516 LSM11P83369 360 aaKnown RBP eCLIP9.16□□□□□ -0.94
CHCHD3P1-201ENST00000425516 INTS5Q6P9B9 1019 aaKnown RBP9.16□□□□□ -0.94
CHCHD3P1-201ENST00000425516 ANKRD13DQ6ZTN6 518 aa9.16□□□□□ -0.94
CHCHD3P1-201ENST00000425516 TSPYL6Q8N831 410 aa9.16□□□□□ -0.94
CHCHD3P1-201ENST00000425516 MYH16Q9H6N6 1097 aa9.16□□□□□ -0.94
CHCHD3P1-201ENST00000425516 TAF1LQ8IZX4 1826 aa9.15□□□□□ -0.94
CHCHD3P1-201ENST00000425516 CNTNAP4Q9C0A0 1308 aa9.15□□□□□ -0.94
CHCHD3P1-201ENST00000425516 NUP188Q5SRE5 1749 aa9.15□□□□□ -0.94
CHCHD3P1-201ENST00000425516 CRKLP46109 303 aaKnown RBP9.15□□□□□ -0.94
CHCHD3P1-201ENST00000425516 ZNF827Q17R98 1081 aa9.15□□□□□ -0.94
CHCHD3P1-201ENST00000425516 AMIGO3Q86WK7 504 aa9.15□□□□□ -0.94
CHCHD3P1-201ENST00000425516 C5P01031 1676 aa9.15□□□□□ -0.94
CHCHD3P1-201ENST00000425516 COL5A3P25940 1745 aaPredicted RBP9.14□□□□□ -0.95
CHCHD3P1-201ENST00000425516 SOS1Q07889 1333 aaPredicted RBP9.14□□□□□ -0.95
CHCHD3P1-201ENST00000425516 VAMP4O75379 141 aa9.14□□□□□ -0.95
CHCHD3P1-201ENST00000425516 STARD3NLO95772 234 aa9.14□□□□□ -0.95
CHCHD3P1-201ENST00000425516 A1BGP04217 495 aa9.14□□□□□ -0.95
CHCHD3P1-201ENST00000425516 HMGB2P26583 209 aaKnown RBP9.14□□□□□ -0.95
CHCHD3P1-201ENST00000425516 PLCB2Q00722 1185 aa9.14□□□□□ -0.95
CHCHD3P1-201ENST00000425516 EXOSC9Q06265 439 aaKnown RBP9.14□□□□□ -0.95
CHCHD3P1-201ENST00000425516 PDIA6Q15084 440 aa9.14□□□□□ -0.95
CHCHD3P1-201ENST00000425516 SLC15A2Q16348 729 aa9.14□□□□□ -0.95
CHCHD3P1-201ENST00000425516 LRP10Q7Z4F1 713 aa9.14□□□□□ -0.95
CHCHD3P1-201ENST00000425516 MYH14Q7Z406 1995 aaKnown RBP9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 NBPF26B4DH59 902 aa9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 ELL2O00472 640 aaPredicted RBP9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 RPS6KA4O75676 772 aa9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 TWISTNBQ3B726 338 aaPredicted RBP9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 PPP4R3BQ5MIZ7 849 aa9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 NBPF14Q5TI25 921 aa9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 NBPF10Q6P3W6 841 aaKnown RBP9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 SMIM5Q71RC9 77 aa9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 NBPF15Q8N660 670 aa9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 ADAM33Q9BZ11 813 aa9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 CCDC87Q9NVE4 849 aa9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 ZBTB1Q9Y2K1 713 aa9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 PCDHGA10Q9Y5H3 936 aa9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 C4BP0C0L5 1744 aa9.13□□□□□ -0.95
CHCHD3P1-201ENST00000425516 EIF5P55010 431 aaKnown RBP9.12□□□□□ -0.95
CHCHD3P1-201ENST00000425516 E2F4Q16254 413 aa9.12□□□□□ -0.95
CHCHD3P1-201ENST00000425516 KCNK17Q96T54 332 aa9.12□□□□□ -0.95
CHCHD3P1-201ENST00000425516 ERBB4Q15303 1308 aa9.11□□□□□ -0.95
CHCHD3P1-201ENST00000425516 PNPLA7Q6ZV29 1317 aa9.11□□□□□ -0.95
CHCHD3P1-201ENST00000425516 ARHGAP33O14559 1287 aa9.11□□□□□ -0.95
CHCHD3P1-201ENST00000425516 EIF2S2P20042 333 aaKnown RBP9.11□□□□□ -0.95
CHCHD3P1-201ENST00000425516 SSFA2P28290 1259 aa9.11□□□□□ -0.95
CHCHD3P1-201ENST00000425516 IL6STP40189 918 aaPredicted RBP9.11□□□□□ -0.95
CHCHD3P1-201ENST00000425516 PROSER3Q2NL68 480 aa9.11□□□□□ -0.95
CHCHD3P1-201ENST00000425516 HDGFL1Q5TGJ6 251 aa9.11□□□□□ -0.95
CHCHD3P1-201ENST00000425516 YTHDC1Q96MU7 727 aaKnown RBP9.11□□□□□ -0.95
CHCHD3P1-201ENST00000425516 DDX21Q9NR30 783 aaKnown RBP eCLIP9.11□□□□□ -0.95
CHCHD3P1-201ENST00000425516 STK32BQ9NY57 414 aa9.11□□□□□ -0.95
CHCHD3P1-201ENST00000425516 LAMB4A4D0S4 1761 aa9.11□□□□□ -0.95
CHCHD3P1-201ENST00000425516 PSDA5PKW4 1024 aaPredicted RBP9.1□□□□□ -0.95
CHCHD3P1-201ENST00000425516 GNPATO15228 680 aa9.1□□□□□ -0.95
CHCHD3P1-201ENST00000425516 CT47B1P0C2W7 299 aaPredicted RBP9.1□□□□□ -0.95
CHCHD3P1-201ENST00000425516 CANXP27824 592 aaKnown RBP9.1□□□□□ -0.95
CHCHD3P1-201ENST00000425516 PBX2P40425 430 aa9.1□□□□□ -0.95
CHCHD3P1-201ENST00000425516 PIP4K2AP48426 406 aaPredicted RBP9.1□□□□□ -0.95
CHCHD3P1-201ENST00000425516 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
CHCHD3P1-201ENST00000425516 ARHGEF1Q92888 912 aaKnown RBP9.1□□□□□ -0.95
CHCHD3P1-201ENST00000425516 AK7Q96M32 723 aa9.1□□□□□ -0.95
CHCHD3P1-201ENST00000425516 PDGFDQ9GZP0 370 aaPredicted RBP9.1□□□□□ -0.95
CHCHD3P1-201ENST00000425516 TFCP2L1Q9NZI6 479 aa9.1□□□□□ -0.95
CHCHD3P1-201ENST00000425516 CHPF2Q9P2E5 772 aa9.1□□□□□ -0.95
CHCHD3P1-201ENST00000425516 RTCBQ9Y3I0 505 aaKnown RBP9.1□□□□□ -0.95
CHCHD3P1-201ENST00000425516 UBR3Q6ZT12 1888 aa9.1□□□□□ -0.95
CHCHD3P1-201ENST00000425516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.09□□□□□ -0.95
CHCHD3P1-201ENST00000425516 ANXA1P04083 346 aa9.09□□□□□ -0.95
CHCHD3P1-201ENST00000425516 TRAPPC3LQ5T215 181 aa9.09□□□□□ -0.95
CHCHD3P1-201ENST00000425516 CCDC30Q5VVM6 783 aa9.09□□□□□ -0.95
CHCHD3P1-201ENST00000425516 COL23A1Q86Y22 540 aaPredicted RBP9.09□□□□□ -0.95
CHCHD3P1-201ENST00000425516 FLAD1Q8NFF5 587 aa9.09□□□□□ -0.95
CHCHD3P1-201ENST00000425516 DDX12PQ92771 950 aa9.09□□□□□ -0.95
CHCHD3P1-201ENST00000425516 ZNF428Q96B54 188 aa9.09□□□□□ -0.95
CHCHD3P1-201ENST00000425516 CHMP4AQ9BY43 222 aa9.09□□□□□ -0.95
CHCHD3P1-201ENST00000425516 DBF4Q9UBU7 674 aaPredicted RBP9.09□□□□□ -0.95
CHCHD3P1-201ENST00000425516 TUBGCP6Q96RT7 1819 aa9.09□□□□□ -0.95
CHCHD3P1-201ENST00000425516 QSER1Q2KHR3 1735 aa9.08□□□□□ -0.96
CHCHD3P1-201ENST00000425516 MYL6BP14649 208 aa9.08□□□□□ -0.96
CHCHD3P1-201ENST00000425516 R3HDM1Q15032 1099 aaKnown RBP9.08□□□□□ -0.96
CHCHD3P1-201ENST00000425516 KCNV2Q8TDN2 545 aa9.08□□□□□ -0.96
CHCHD3P1-201ENST00000425516 BCL2L12Q9HB09 334 aa9.08□□□□□ -0.96
CHCHD3P1-201ENST00000425516 HYPKQ9NX55 129 aa9.08□□□□□ -0.96
CHCHD3P1-201ENST00000425516 COL15A1P39059 1388 aa9.08□□□□□ -0.96
CHCHD3P1-201ENST00000425516 TCERG1O14776 1098 aaKnown RBP9.07□□□□□ -0.96
CHCHD3P1-201ENST00000425516 CAMTA2O94983 1202 aa9.07□□□□□ -0.96
CHCHD3P1-201ENST00000425516 RARSP54136 660 aaKnown RBP9.07□□□□□ -0.96
CHCHD3P1-201ENST00000425516 ALDH1L2Q3SY69 923 aa9.07□□□□□ -0.96
CHCHD3P1-201ENST00000425516 ADGRD1Q6QNK2 874 aa9.07□□□□□ -0.96
CHCHD3P1-201ENST00000425516 TTLL7Q6ZT98 887 aa9.07□□□□□ -0.96
CHCHD3P1-201ENST00000425516 G2E3Q7L622 706 aa9.07□□□□□ -0.96
CHCHD3P1-201ENST00000425516 MRPL50Q8N5N7 158 aaKnown RBP9.07□□□□□ -0.96
CHCHD3P1-201ENST00000425516 SSH1Q8WYL5 1049 aa9.07□□□□□ -0.96
CHCHD3P1-201ENST00000425516 ZDHHC16Q969W1 377 aa9.07□□□□□ -0.96
CHCHD3P1-201ENST00000425516 PHAXQ9H814 394 aaKnown RBP9.07□□□□□ -0.96
CHCHD3P1-201ENST00000425516 WDR70Q9NW82 654 aa9.07□□□□□ -0.96
CHCHD3P1-201ENST00000425516 NARFQ9UHQ1 456 aa9.07□□□□□ -0.96
CHCHD3P1-201ENST00000425516 USP42Q9H9J4 1324 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms