RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 PARP10Q53GL7 1025 aa21.15■□□□□ 0.98
DDR1-234ENST00000424544 COPS6Q7L5N1 327 aa21.15■□□□□ 0.98
DDR1-234ENST00000424544 DDNO94850 711 aaPredicted RBP21.14■□□□□ 0.97
DDR1-234ENST00000424544 CFAP44Q96MT7 982 aa21.14■□□□□ 0.97
DDR1-234ENST00000424544 DDX21Q9NR30 783 aaKnown RBP eCLIP21.14■□□□□ 0.97
DDR1-234ENST00000424544 CC2D2BQ6DHV5 1058 aa21.13■□□□□ 0.97
DDR1-234ENST00000424544 C3orf67Q6ZVT6 689 aa21.13■□□□□ 0.97
DDR1-234ENST00000424544 CRAMP1Q96RY5 1269 aa21.13■□□□□ 0.97
DDR1-234ENST00000424544 ZNF277Q9NRM2 450 aaPredicted RBP21.13■□□□□ 0.97
DDR1-234ENST00000424544 HOXB7P09629 217 aa21.12■□□□□ 0.97
DDR1-234ENST00000424544 ZNF853P0CG23 659 aa21.12■□□□□ 0.97
DDR1-234ENST00000424544 HTRA3P83110 453 aa21.12■□□□□ 0.97
DDR1-234ENST00000424544 PPP1R42Q7Z4L9 355 aa21.12■□□□□ 0.97
DDR1-234ENST00000424544 SYNE4Q8N205 404 aa21.12■□□□□ 0.97
DDR1-234ENST00000424544 L3MBTL3Q96JM7 780 aaPredicted RBP21.12■□□□□ 0.97
DDR1-234ENST00000424544 PSMD1Q99460 953 aa21.12■□□□□ 0.97
DDR1-234ENST00000424544 ANP32CO43423 234 aa21.11■□□□□ 0.97
DDR1-234ENST00000424544 TCIRG1Q13488 830 aa21.11■□□□□ 0.97
DDR1-234ENST00000424544 XAGE3Q8WTP9 111 aa21.11■□□□□ 0.97
DDR1-234ENST00000424544 FZD9O00144 591 aa21.1■□□□□ 0.97
DDR1-234ENST00000424544 NLRP10Q86W26 655 aa21.1■□□□□ 0.97
DDR1-234ENST00000424544 NECTIN2Q92692 538 aa21.1■□□□□ 0.97
DDR1-234ENST00000424544 KLRG1Q96E93 195 aa21.1■□□□□ 0.97
DDR1-234ENST00000424544 UTP14AQ9BVJ6 771 aaKnown RBP21.1■□□□□ 0.97
DDR1-234ENST00000424544 IARSP41252 1262 aaKnown RBP21.09■□□□□ 0.97
DDR1-234ENST00000424544 GRIPAP1Q4V328 841 aa21.09■□□□□ 0.97
DDR1-234ENST00000424544 HSP90AB3PQ58FF7 597 aa21.09■□□□□ 0.97
DDR1-234ENST00000424544 JMYQ8N9B5 988 aa21.09■□□□□ 0.97
DDR1-234ENST00000424544 NLRP3Q96P20 1036 aa21.09■□□□□ 0.97
DDR1-234ENST00000424544 RNF123Q5XPI4 1314 aa21.08■□□□□ 0.97
DDR1-234ENST00000424544 RPGRQ92834 1020 aaKnown RBP21.08■□□□□ 0.97
DDR1-234ENST00000424544 RBM17Q96I25 401 aaKnown RBP21.08■□□□□ 0.97
DDR1-234ENST00000424544 LAS1LQ9Y4W2 734 aaKnown RBP21.08■□□□□ 0.97
DDR1-234ENST00000424544 APAF1O14727 1248 aa21.07■□□□□ 0.96
DDR1-234ENST00000424544 AIMP1Q12904 312 aaKnown RBP21.07■□□□□ 0.96
DDR1-234ENST00000424544 CHPF2Q9P2E5 772 aa21.07■□□□□ 0.96
DDR1-234ENST00000424544 POTEIP0CG38 1075 aa21.06■□□□□ 0.96
DDR1-234ENST00000424544 POTEJP0CG39 1038 aa21.06■□□□□ 0.96
DDR1-234ENST00000424544 MBIPQ9NS73 344 aa21.06■□□□□ 0.96
DDR1-234ENST00000424544 ZNF541Q9H0D2 1346 aa21.05■□□□□ 0.96
DDR1-234ENST00000424544 HDGFL1Q5TGJ6 251 aa21.05■□□□□ 0.96
DDR1-234ENST00000424544 DUSP27Q5VZP5 1158 aa21.05■□□□□ 0.96
DDR1-234ENST00000424544 ANKRD13DQ6ZTN6 518 aa21.05■□□□□ 0.96
DDR1-234ENST00000424544 SLC51AQ86UW1 340 aa21.05■□□□□ 0.96
DDR1-234ENST00000424544 PLBD2Q8NHP8 589 aa21.05■□□□□ 0.96
DDR1-234ENST00000424544 TAF1DQ9H5J8 278 aaPredicted RBP21.05■□□□□ 0.96
DDR1-234ENST00000424544 DBF4Q9UBU7 674 aaPredicted RBP21.05■□□□□ 0.96
DDR1-234ENST00000424544 IQCA1LA6NCM1 817 aa21.04■□□□□ 0.96
DDR1-234ENST00000424544 CHADLQ6NUI6 762 aa21.04■□□□□ 0.96
DDR1-234ENST00000424544 ISCA1Q9BUE6 129 aa21.04■□□□□ 0.96
DDR1-234ENST00000424544 IFT57Q9NWB7 429 aa21.04■□□□□ 0.96
DDR1-234ENST00000424544 ATP6V0A2Q9Y487 856 aa21.04■□□□□ 0.96
DDR1-234ENST00000424544 SCN4AP35499 1836 aa21.04■□□□□ 0.96
DDR1-234ENST00000424544 BBOX1O75936 387 aa21.03■□□□□ 0.96
DDR1-234ENST00000424544 TRIM28Q13263 835 aaKnown RBP21.03■□□□□ 0.96
DDR1-234ENST00000424544 COL4A5P29400 1685 aa21.02■□□□□ 0.96
DDR1-234ENST00000424544 PPEF1O14829 653 aaPredicted RBP21.02■□□□□ 0.96
DDR1-234ENST00000424544 CCDC184Q52MB2 194 aa21.02■□□□□ 0.96
DDR1-234ENST00000424544 GPC2Q8N158 579 aa21.02■□□□□ 0.96
DDR1-234ENST00000424544 HYPKQ9NX55 129 aa21.02■□□□□ 0.96
DDR1-234ENST00000424544 TRMT112Q9UI30 125 aaKnown RBP21.02■□□□□ 0.96
DDR1-234ENST00000424544 ABCC4O15439 1325 aa21.02■□□□□ 0.95
DDR1-234ENST00000424544 ANKRD36CQ5JPF3 1778 aa21.01■□□□□ 0.95
DDR1-234ENST00000424544 HCLS1P14317 486 aaPredicted RBP21.01■□□□□ 0.95
DDR1-234ENST00000424544 GNAI1P63096 354 aa21.01■□□□□ 0.95
DDR1-234ENST00000424544 SP8Q8IXZ3 490 aa21.01■□□□□ 0.95
DDR1-234ENST00000424544 JDP2Q8WYK2 163 aa21.01■□□□□ 0.95
DDR1-234ENST00000424544 RTFDC1Q9BY42 306 aaPredicted RBP21.01■□□□□ 0.95
DDR1-234ENST00000424544 VPS33BQ9H267 617 aa21.01■□□□□ 0.95
DDR1-234ENST00000424544 SH3TC1Q8TE82 1336 aa21.01■□□□□ 0.95
DDR1-234ENST00000424544 ITGBL1O95965 494 aaPredicted RBP21■□□□□ 0.95
DDR1-234ENST00000424544 IFFO2Q5TF58 517 aa21■□□□□ 0.95
DDR1-234ENST00000424544 LDHDQ86WU2 507 aa21■□□□□ 0.95
DDR1-234ENST00000424544 PASKQ96RG2 1323 aa21■□□□□ 0.95
DDR1-234ENST00000424544 HACL1Q9UJ83 578 aa20.99■□□□□ 0.95
DDR1-234ENST00000424544 TCERG1O14776 1098 aaKnown RBP20.98■□□□□ 0.95
DDR1-234ENST00000424544 CALD1Q05682 793 aaKnown RBP20.98■□□□□ 0.95
DDR1-234ENST00000424544 MIER1Q8N108 512 aa20.98■□□□□ 0.95
DDR1-234ENST00000424544 C8orf58Q8NAV2 365 aa20.98■□□□□ 0.95
DDR1-234ENST00000424544 EPHX2P34913 555 aa20.97■□□□□ 0.95
DDR1-234ENST00000424544 SF3B3Q15393 1217 aaKnown RBP20.97■□□□□ 0.95
DDR1-234ENST00000424544 ATP5J2-PTCD1G3V325 749 aa20.96■□□□□ 0.95
DDR1-234ENST00000424544 LARGE2Q8N3Y3 721 aa20.96■□□□□ 0.95
DDR1-234ENST00000424544 CREBZFQ9NS37 354 aa20.96■□□□□ 0.95
DDR1-234ENST00000424544 LAMB2P55268 1798 aa20.95■□□□□ 0.94
DDR1-234ENST00000424544 ADAMTSL1Q8N6G6 1762 aa20.95■□□□□ 0.94
DDR1-234ENST00000424544 EIF6P56537 245 aaKnown RBP20.95■□□□□ 0.94
DDR1-234ENST00000424544 GRAPQ13588 217 aa20.95■□□□□ 0.94
DDR1-234ENST00000424544 CCDC27Q2M243 656 aa20.95■□□□□ 0.94
DDR1-234ENST00000424544 NCBP3Q53F19 620 aaKnown RBP20.95■□□□□ 0.94
DDR1-234ENST00000424544 DDX46Q7L014 1031 aaKnown RBP20.95■□□□□ 0.94
DDR1-234ENST00000424544 PNMA8AQ86V59 439 aaPredicted RBP20.95■□□□□ 0.94
DDR1-234ENST00000424544 GRAPLQ8TC17 118 aaPredicted RBP20.95■□□□□ 0.94
DDR1-234ENST00000424544 FAM89AQ96GI7 184 aa20.95■□□□□ 0.94
DDR1-234ENST00000424544 PHAXQ9H814 394 aaKnown RBP20.95■□□□□ 0.94
DDR1-234ENST00000424544 ELL2O00472 640 aaPredicted RBP20.94■□□□□ 0.94
DDR1-234ENST00000424544 SCNN1DP51172 638 aa20.94■□□□□ 0.94
DDR1-234ENST00000424544 TMC4Q7Z404 712 aa20.93■□□□□ 0.94
DDR1-234ENST00000424544 MPNDQ8N594 471 aa20.93■□□□□ 0.94
DDR1-234ENST00000424544 PPIP5K2O43314 1243 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms