RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 PIP4K2AP48426 406 aaPredicted RBP20.78■□□□□ 0.92
RPUSD3-204ENST00000424438 JDP2Q8WYK2 163 aa20.78■□□□□ 0.92
RPUSD3-204ENST00000424438 RNF123Q5XPI4 1314 aa20.78■□□□□ 0.92
RPUSD3-204ENST00000424438 MAP1SQ66K74 1059 aaPredicted RBP20.77■□□□□ 0.92
RPUSD3-204ENST00000424438 CCER1Q8TC90 406 aaPredicted RBP20.77■□□□□ 0.92
RPUSD3-204ENST00000424438 TAF7Q15545 349 aaPredicted RBP20.76■□□□□ 0.91
RPUSD3-204ENST00000424438 KDM3BQ7LBC6 1761 aa20.76■□□□□ 0.91
RPUSD3-204ENST00000424438 GRM1Q13255 1194 aa20.75■□□□□ 0.91
RPUSD3-204ENST00000424438 HLFQ16534 295 aa20.75■□□□□ 0.91
RPUSD3-204ENST00000424438 OLFM4Q6UX06 510 aa20.75■□□□□ 0.91
RPUSD3-204ENST00000424438 MCM10Q7L590 875 aa20.75■□□□□ 0.91
RPUSD3-204ENST00000424438 LTBP1Q14766 1721 aa20.75■□□□□ 0.91
RPUSD3-204ENST00000424438 EIF6P56537 245 aaKnown RBP20.74■□□□□ 0.91
RPUSD3-204ENST00000424438 CAPNS2Q96L46 248 aa20.74■□□□□ 0.91
RPUSD3-204ENST00000424438 VPS33BQ9H267 617 aa20.74■□□□□ 0.91
RPUSD3-204ENST00000424438 DDX21Q9NR30 783 aaKnown RBP eCLIP20.74■□□□□ 0.91
RPUSD3-204ENST00000424438 COL4A5P29400 1685 aa20.73■□□□□ 0.91
RPUSD3-204ENST00000424438 ABCC12Q96J65 1359 aa20.73■□□□□ 0.91
RPUSD3-204ENST00000424438 GTF2E1P29083 439 aaPredicted RBP20.73■□□□□ 0.91
RPUSD3-204ENST00000424438 PNISRQ8TF01 805 aaKnown RBP20.73■□□□□ 0.91
RPUSD3-204ENST00000424438 GPR101Q96P66 508 aaPredicted RBP20.73■□□□□ 0.91
RPUSD3-204ENST00000424438 CRAMP1Q96RY5 1269 aa20.73■□□□□ 0.91
RPUSD3-204ENST00000424438 MAP3K15Q6ZN16 1313 aa20.73■□□□□ 0.91
RPUSD3-204ENST00000424438 U2AF1L5P0DN76 240 aaPredicted RBP20.72■□□□□ 0.91
RPUSD3-204ENST00000424438 LMOD1P29536 600 aaPredicted RBP20.72■□□□□ 0.91
RPUSD3-204ENST00000424438 U2AF1Q01081 240 aaKnown RBP eCLIP20.72■□□□□ 0.91
RPUSD3-204ENST00000424438 USP50Q70EL3 339 aaPredicted RBP20.72■□□□□ 0.91
RPUSD3-204ENST00000424438 DLG5Q8TDM6 1919 aa20.7■□□□□ 0.91
RPUSD3-204ENST00000424438 SCNN1DP51172 638 aa20.7■□□□□ 0.9
RPUSD3-204ENST00000424438 ERBB4Q15303 1308 aa20.7■□□□□ 0.9
RPUSD3-204ENST00000424438 CA12O43570 354 aa20.69■□□□□ 0.9
RPUSD3-204ENST00000424438 RPGRQ92834 1020 aaKnown RBP20.69■□□□□ 0.9
RPUSD3-204ENST00000424438 TSKSQ9UJT2 592 aa20.69■□□□□ 0.9
RPUSD3-204ENST00000424438 FAM177BA6PVY3 158 aa20.68■□□□□ 0.9
RPUSD3-204ENST00000424438 PPP2R1AP30153 589 aa20.68■□□□□ 0.9
RPUSD3-204ENST00000424438 CYP4F22Q6NT55 531 aa20.68■□□□□ 0.9
RPUSD3-204ENST00000424438 MCOLN1Q9GZU1 580 aa20.68■□□□□ 0.9
RPUSD3-204ENST00000424438 PDE4DIPQ5VU43 2346 aa20.67■□□□□ 0.9
RPUSD3-204ENST00000424438 DCTN1Q14203 1278 aa20.67■□□□□ 0.9
RPUSD3-204ENST00000424438 KIF6Q6ZMV9 814 aa20.67■□□□□ 0.9
RPUSD3-204ENST00000424438 ZNF34Q8IZ26 560 aa20.67■□□□□ 0.9
RPUSD3-204ENST00000424438 LARGE2Q8N3Y3 721 aa20.67■□□□□ 0.9
RPUSD3-204ENST00000424438 RBM17Q96I25 401 aaKnown RBP20.67■□□□□ 0.9
RPUSD3-204ENST00000424438 HHIPL1Q96JK4 782 aa20.67■□□□□ 0.9
RPUSD3-204ENST00000424438 CDHR2Q9BYE9 1310 aa20.67■□□□□ 0.9
RPUSD3-204ENST00000424438 MAP2K2P36507 400 aa20.66■□□□□ 0.9
RPUSD3-204ENST00000424438 NUTM1Q86Y26 1132 aa20.66■□□□□ 0.9
RPUSD3-204ENST00000424438 GJA3Q9Y6H8 435 aa20.66■□□□□ 0.9
RPUSD3-204ENST00000424438 TLL2Q9Y6L7 1015 aa20.66■□□□□ 0.9
RPUSD3-204ENST00000424438 UBN2Q6ZU65 1347 aa20.66■□□□□ 0.9
RPUSD3-204ENST00000424438 NTSR2O95665 410 aa20.65■□□□□ 0.9
RPUSD3-204ENST00000424438 EPS15P42566 896 aa20.65■□□□□ 0.9
RPUSD3-204ENST00000424438 EIF4A1P60842 406 aaKnown RBP20.65■□□□□ 0.9
RPUSD3-204ENST00000424438 PARP10Q53GL7 1025 aa20.65■□□□□ 0.9
RPUSD3-204ENST00000424438 GIGYF2Q6Y7W6 1299 aaKnown RBP20.65■□□□□ 0.9
RPUSD3-204ENST00000424438 PPEF1O14829 653 aaPredicted RBP20.64■□□□□ 0.89
RPUSD3-204ENST00000424438 CST9Q5W186 159 aa20.64■□□□□ 0.89
RPUSD3-204ENST00000424438 NIM1KQ8IY84 436 aa20.64■□□□□ 0.89
RPUSD3-204ENST00000424438 RTFDC1Q9BY42 306 aaPredicted RBP20.64■□□□□ 0.89
RPUSD3-204ENST00000424438 ADARB2Q9NS39 739 aaKnown RBP20.64■□□□□ 0.89
RPUSD3-204ENST00000424438 PGAP2Q9UHJ9 254 aa20.64■□□□□ 0.89
RPUSD3-204ENST00000424438 DGKZQ13574 1117 aa20.63■□□□□ 0.89
RPUSD3-204ENST00000424438 SLC10A5Q5PT55 438 aa20.63■□□□□ 0.89
RPUSD3-204ENST00000424438 SUSD4Q5VX71 490 aa20.63■□□□□ 0.89
RPUSD3-204ENST00000424438 TTLL7Q6ZT98 887 aa20.63■□□□□ 0.89
RPUSD3-204ENST00000424438 PPP1R42Q7Z4L9 355 aa20.63■□□□□ 0.89
RPUSD3-204ENST00000424438 GPRC5DQ9NZD1 345 aa20.63■□□□□ 0.89
RPUSD3-204ENST00000424438 ATP6V0A2Q9Y487 856 aa20.63■□□□□ 0.89
RPUSD3-204ENST00000424438 ANKRD36CQ5JPF3 1778 aa20.62■□□□□ 0.89
RPUSD3-204ENST00000424438 NEFMP07197 916 aa20.62■□□□□ 0.89
RPUSD3-204ENST00000424438 SUPT20HQ8NEM7 779 aa20.62■□□□□ 0.89
RPUSD3-204ENST00000424438 ZC3H15Q8WU90 426 aaKnown RBP20.62■□□□□ 0.89
RPUSD3-204ENST00000424438 AOC2O75106 756 aa20.61■□□□□ 0.89
RPUSD3-204ENST00000424438 NLRP3Q96P20 1036 aa20.61■□□□□ 0.89
RPUSD3-204ENST00000424438 TMX4Q9H1E5 349 aaPredicted RBP20.61■□□□□ 0.89
RPUSD3-204ENST00000424438 PPIP5K2O43314 1243 aa20.6■□□□□ 0.89
RPUSD3-204ENST00000424438 MIS18AQ9NYP9 233 aa20.6■□□□□ 0.89
RPUSD3-204ENST00000424438 ZNRF3Q9ULT6 936 aa20.6■□□□□ 0.89
RPUSD3-204ENST00000424438 GPTP24298 496 aa20.59■□□□□ 0.89
RPUSD3-204ENST00000424438 CNGB1Q14028 1251 aaPredicted RBP20.59■□□□□ 0.89
RPUSD3-204ENST00000424438 LRP10Q7Z4F1 713 aa20.59■□□□□ 0.89
RPUSD3-204ENST00000424438 SAPCD2Q86UD0 394 aa20.59■□□□□ 0.89
RPUSD3-204ENST00000424438 RRP7AQ9Y3A4 280 aaKnown RBP20.59■□□□□ 0.89
RPUSD3-204ENST00000424438 BBOX1O75936 387 aa20.58■□□□□ 0.89
RPUSD3-204ENST00000424438 BRPF1P55201 1214 aaPredicted RBP20.58■□□□□ 0.89
RPUSD3-204ENST00000424438 FMR1Q06787 632 aaKnown RBP eCLIP20.58■□□□□ 0.89
RPUSD3-204ENST00000424438 PLEKHF1Q96S99 279 aa20.58■□□□□ 0.89
RPUSD3-204ENST00000424438 ZBTB3Q9H5J0 574 aa20.58■□□□□ 0.89
RPUSD3-204ENST00000424438 LAMB2P55268 1798 aa20.58■□□□□ 0.89
RPUSD3-204ENST00000424438 TRAF5O00463 557 aa20.57■□□□□ 0.88
RPUSD3-204ENST00000424438 CXCL9Q07325 125 aa20.57■□□□□ 0.88
RPUSD3-204ENST00000424438 NFE2L2Q16236 605 aa20.57■□□□□ 0.88
RPUSD3-204ENST00000424438 NGEFQ8N5V2 710 aa20.57■□□□□ 0.88
RPUSD3-204ENST00000424438 BABAM1Q9NWV8 329 aa20.57■□□□□ 0.88
RPUSD3-204ENST00000424438 KIAA2012Q0VF49 1180 aa20.56■□□□□ 0.88
RPUSD3-204ENST00000424438 AOC3Q16853 763 aa20.56■□□□□ 0.88
RPUSD3-204ENST00000424438 C3orf67Q6ZVT6 689 aa20.56■□□□□ 0.88
RPUSD3-204ENST00000424438 SP8Q8IXZ3 490 aa20.56■□□□□ 0.88
RPUSD3-204ENST00000424438 UTP14AQ9BVJ6 771 aaKnown RBP20.56■□□□□ 0.88
RPUSD3-204ENST00000424438 PNNQ9H307 717 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms