RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 WDR66Q8TBY9 1149 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 DNAI2Q9GZS0 605 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 MKNK2Q9HBH9 465 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 COMMD10Q9Y6G5 202 aa13.86□□□□□ -0.19
LAMA4-207ENST00000424408 IFIT3O14879 490 aaKnown RBP13.85□□□□□ -0.19
LAMA4-207ENST00000424408 DNAJC21Q5F1R6 531 aaKnown RBP13.85□□□□□ -0.19
LAMA4-207ENST00000424408 TRIM47Q96LD4 638 aa13.85□□□□□ -0.19
LAMA4-207ENST00000424408 A0A087WZG4 1122 aa13.85□□□□□ -0.19
LAMA4-207ENST00000424408 AKR1B10O60218 316 aa13.85□□□□□ -0.19
LAMA4-207ENST00000424408 ZEB2O60315 1214 aa13.85□□□□□ -0.19
LAMA4-207ENST00000424408 FAM200AQ8TCP9 573 aa13.85□□□□□ -0.19
LAMA4-207ENST00000424408 PHACTR2O75167 634 aa13.85□□□□□ -0.19
LAMA4-207ENST00000424408 KIF5BP33176 963 aa13.85□□□□□ -0.19
LAMA4-207ENST00000424408 CYLC1P35663 651 aaPredicted RBP13.85□□□□□ -0.19
LAMA4-207ENST00000424408 GTF3C6Q969F1 213 aa13.85□□□□□ -0.19
LAMA4-207ENST00000424408 CAPZA3Q96KX2 299 aa13.85□□□□□ -0.19
LAMA4-207ENST00000424408 RASAL2Q9UJF2 1139 aa13.85□□□□□ -0.19
LAMA4-207ENST00000424408 PPP4R3AQ6IN85 833 aa13.85□□□□□ -0.19
LAMA4-207ENST00000424408 TMX3Q96JJ7 454 aa13.85□□□□□ -0.19
LAMA4-207ENST00000424408 DNAJC25Q9H1X3 360 aa13.85□□□□□ -0.19
LAMA4-207ENST00000424408 GOLIM4O00461 696 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 IGHDP01880 384 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 PIP4K2BP78356 416 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 RRAGBQ5VZM2 374 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 MCM10Q7L590 875 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 USP16Q9Y5T5 823 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 FEZ1Q99689 392 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 STMN4Q9H169 189 aaPredicted RBP13.84□□□□□ -0.19
LAMA4-207ENST00000424408 PUF60Q9UHX1 559 aaKnown RBP13.84□□□□□ -0.19
LAMA4-207ENST00000424408 KIAA1107Q9UPP5 1409 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 CETN1Q12798 172 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 RAB11FIP4Q86YS3 637 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 CTAGE1Q96RT6 745 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 NSD3Q9BZ95 1437 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 GNAT3A8MTJ3 354 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 IDEP14735 1019 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 SYKP43405 635 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 PRIM1P49642 420 aaKnown RBP13.84□□□□□ -0.19
LAMA4-207ENST00000424408 TXNDC2Q86VQ3 553 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 DDX12PQ92771 950 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 SELENOOQ9BVL4 669 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 BMP2KLQ5H9B9 411 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 PSMD1Q99460 953 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 IQCGQ9H095 443 aaKnown RBP13.84□□□□□ -0.19
LAMA4-207ENST00000424408 ATAD2BQ9ULI0 1458 aa13.84□□□□□ -0.19
LAMA4-207ENST00000424408 EVI5LQ96CN4 794 aa13.83□□□□□ -0.19
LAMA4-207ENST00000424408 MMRN2Q9H8L6 949 aa13.83□□□□□ -0.19
LAMA4-207ENST00000424408 ZNF287Q9HBT7 754 aa13.83□□□□□ -0.19
LAMA4-207ENST00000424408 CPSF2Q9P2I0 782 aaKnown RBP13.83□□□□□ -0.19
LAMA4-207ENST00000424408 RHOXF2BP0C7M4 288 aa13.83□□□□□ -0.2
LAMA4-207ENST00000424408 TTC22Q5TAA0 569 aa13.83□□□□□ -0.2
LAMA4-207ENST00000424408 RHOXF2Q9BQY4 288 aa13.83□□□□□ -0.2
LAMA4-207ENST00000424408 PTGS1P23219 599 aa13.83□□□□□ -0.2
LAMA4-207ENST00000424408 ZSCAN16Q9H4T2 348 aaPredicted RBP13.83□□□□□ -0.2
LAMA4-207ENST00000424408 DDX46Q7L014 1031 aaKnown RBP13.83□□□□□ -0.2
LAMA4-207ENST00000424408 SMC6Q96SB8 1091 aa13.83□□□□□ -0.2
LAMA4-207ENST00000424408 MYD88Q99836 296 aa13.83□□□□□ -0.2
LAMA4-207ENST00000424408 TCP11L1Q9NUJ3 509 aa13.83□□□□□ -0.2
LAMA4-207ENST00000424408 F6X3S4 739 aa13.83□□□□□ -0.2
LAMA4-207ENST00000424408 SYT10Q6XYQ8 523 aa13.83□□□□□ -0.2
LAMA4-207ENST00000424408 CPLX4Q7Z7G2 160 aa13.83□□□□□ -0.2
LAMA4-207ENST00000424408 PYM1Q9BRP8 204 aaKnown RBP13.83□□□□□ -0.2
LAMA4-207ENST00000424408 EXOC1Q9NV70 894 aa13.83□□□□□ -0.2
LAMA4-207ENST00000424408 IARSP41252 1262 aaKnown RBP13.82□□□□□ -0.2
LAMA4-207ENST00000424408 CATIPQ7Z7H3 387 aa13.82□□□□□ -0.2
LAMA4-207ENST00000424408 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
LAMA4-207ENST00000424408 ORC3Q9UBD5 711 aaPredicted RBP13.82□□□□□ -0.2
LAMA4-207ENST00000424408 KARSQ15046 597 aaKnown RBP13.82□□□□□ -0.2
LAMA4-207ENST00000424408 SMIM23A6NLE4 172 aa13.82□□□□□ -0.2
LAMA4-207ENST00000424408 TUBB4AP04350 444 aa13.82□□□□□ -0.2
LAMA4-207ENST00000424408 KRT13P13646 458 aa13.82□□□□□ -0.2
LAMA4-207ENST00000424408 AFMP43652 599 aa13.82□□□□□ -0.2
LAMA4-207ENST00000424408 NECAB1Q8N987 351 aa13.82□□□□□ -0.2
LAMA4-207ENST00000424408 NOL3O60936 208 aaKnown RBP13.82□□□□□ -0.2
LAMA4-207ENST00000424408 TERF1P54274 439 aa13.82□□□□□ -0.2
LAMA4-207ENST00000424408 IQCA1Q86XH1 822 aa13.82□□□□□ -0.2
LAMA4-207ENST00000424408 FAM76AQ8TAV0 307 aa13.82□□□□□ -0.2
LAMA4-207ENST00000424408 TTC14Q96N46 770 aa13.82□□□□□ -0.2
LAMA4-207ENST00000424408 RMND1Q9NWS8 449 aa13.82□□□□□ -0.2
LAMA4-207ENST00000424408 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.82□□□□□ -0.2
LAMA4-207ENST00000424408 TACC1O75410 805 aa13.81□□□□□ -0.2
LAMA4-207ENST00000424408 ZBTB16Q05516 673 aa13.81□□□□□ -0.2
LAMA4-207ENST00000424408 SREK1Q8WXA9 508 aaKnown RBP13.81□□□□□ -0.2
LAMA4-207ENST00000424408 GRIPAP1Q4V328 841 aa13.81□□□□□ -0.2
LAMA4-207ENST00000424408 TSHZ3Q63HK5 1081 aa13.81□□□□□ -0.2
LAMA4-207ENST00000424408 NEK1Q96PY6 1258 aa13.81□□□□□ -0.2
LAMA4-207ENST00000424408 HFM1A2PYH4 1435 aa13.81□□□□□ -0.2
LAMA4-207ENST00000424408 SLC26A6Q9BXS9 759 aa13.81□□□□□ -0.2
LAMA4-207ENST00000424408 ARHGAP5Q13017 1502 aa13.81□□□□□ -0.2
LAMA4-207ENST00000424408 DHX29Q7Z478 1369 aaKnown RBP13.81□□□□□ -0.2
LAMA4-207ENST00000424408 TRIM27P14373 513 aa13.81□□□□□ -0.2
LAMA4-207ENST00000424408 METAP2P50579 478 aaKnown RBP eCLIP13.81□□□□□ -0.2
LAMA4-207ENST00000424408 CUL5Q93034 780 aa13.81□□□□□ -0.2
LAMA4-207ENST00000424408 TMEM67Q5HYA8 995 aa13.8□□□□□ -0.2
LAMA4-207ENST00000424408 HDXQ7Z353 690 aa13.8□□□□□ -0.2
LAMA4-207ENST00000424408 ACTN2P35609 894 aa13.8□□□□□ -0.2
LAMA4-207ENST00000424408 IFT81Q8WYA0 676 aa13.8□□□□□ -0.2
LAMA4-207ENST00000424408 TBC1D5Q92609 795 aa13.8□□□□□ -0.2
LAMA4-207ENST00000424408 CCDC77Q9BR77 488 aa13.8□□□□□ -0.2
LAMA4-207ENST00000424408 MAP3K12Q12852 859 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms