RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 ADD1P35611 737 aaKnown RBP15.38■□□□□ 0.05
TOP2B-203ENST00000424225 GOLPH3LQ9H4A5 285 aa15.38■□□□□ 0.05
TOP2B-203ENST00000424225 OGFRQ9NZT2 677 aa15.38■□□□□ 0.05
TOP2B-203ENST00000424225 AOX1Q06278 1338 aa15.38■□□□□ 0.05
TOP2B-203ENST00000424225 TNNT1P13805 278 aa15.38■□□□□ 0.05
TOP2B-203ENST00000424225 PDRG1Q9NUG6 133 aa15.38■□□□□ 0.05
TOP2B-203ENST00000424225 CCZ1BP86790 482 aa15.37■□□□□ 0.05
TOP2B-203ENST00000424225 CCZ1P86791 482 aaPredicted RBP15.37■□□□□ 0.05
TOP2B-203ENST00000424225 ZNF589Q86UQ0 364 aaPredicted RBP15.37■□□□□ 0.05
TOP2B-203ENST00000424225 KAZALD1Q96I82 304 aa15.37■□□□□ 0.05
TOP2B-203ENST00000424225 CACNA1FO60840 1977 aa15.37■□□□□ 0.05
TOP2B-203ENST00000424225 NBPF11Q86T75 865 aa15.37■□□□□ 0.05
TOP2B-203ENST00000424225 EDC3Q96F86 508 aaKnown RBP15.37■□□□□ 0.05
TOP2B-203ENST00000424225 CAPN2P17655 700 aa15.37■□□□□ 0.05
TOP2B-203ENST00000424225 TERF2Q15554 542 aa15.37■□□□□ 0.05
TOP2B-203ENST00000424225 A0A0D9SFI3 127 aa15.36■□□□□ 0.05
TOP2B-203ENST00000424225 A0A0G2JLW4 131 aa15.36■□□□□ 0.05
TOP2B-203ENST00000424225 SRGAP3O43295 1099 aa15.36■□□□□ 0.05
TOP2B-203ENST00000424225 PPFIA3O75145 1194 aa15.36■□□□□ 0.05
TOP2B-203ENST00000424225 VPS53Q5VIR6 699 aa15.36■□□□□ 0.05
TOP2B-203ENST00000424225 LEO1Q8WVC0 666 aaPredicted RBP15.36■□□□□ 0.05
TOP2B-203ENST00000424225 USP42Q9H9J4 1324 aaKnown RBP15.36■□□□□ 0.05
TOP2B-203ENST00000424225 USP6P35125 1406 aa15.36■□□□□ 0.05
TOP2B-203ENST00000424225 LAMA4Q16363 1823 aa15.36■□□□□ 0.05
TOP2B-203ENST00000424225 TDRD7Q8NHU6 1098 aaKnown RBP15.36■□□□□ 0.05
TOP2B-203ENST00000424225 NEDD4P46934 1319 aa15.36■□□□□ 0.05
TOP2B-203ENST00000424225 BEND3Q5T5X7 828 aa15.35■□□□□ 0.05
TOP2B-203ENST00000424225 BBXQ8WY36 941 aaPredicted RBP15.35■□□□□ 0.05
TOP2B-203ENST00000424225 NDUFB9Q9Y6M9 179 aa15.35■□□□□ 0.05
TOP2B-203ENST00000424225 PRAMEF22A3QJZ6 481 aa15.35■□□□□ 0.05
TOP2B-203ENST00000424225 SMTNL1A8MU46 457 aa15.35■□□□□ 0.05
TOP2B-203ENST00000424225 CCDC192P0DO97 292 aa15.35■□□□□ 0.05
TOP2B-203ENST00000424225 LRRC8AQ8IWT6 810 aa15.35■□□□□ 0.05
TOP2B-203ENST00000424225 IRX5P78411 483 aaPredicted RBP15.35■□□□□ 0.05
TOP2B-203ENST00000424225 DHX40Q8IX18 779 aaKnown RBP15.35■□□□□ 0.05
TOP2B-203ENST00000424225 IGSF1Q8N6C5 1336 aa15.35■□□□□ 0.05
TOP2B-203ENST00000424225 SLFNL1Q499Z3 407 aa15.34■□□□□ 0.05
TOP2B-203ENST00000424225 GNAI3P08754 354 aa15.34■□□□□ 0.05
TOP2B-203ENST00000424225 STK3Q13188 491 aa15.34■□□□□ 0.05
TOP2B-203ENST00000424225 SNW1Q13573 536 aaKnown RBP15.34■□□□□ 0.05
TOP2B-203ENST00000424225 MAP3K11Q16584 847 aa15.34■□□□□ 0.05
TOP2B-203ENST00000424225 CREB3L3Q68CJ9 461 aa15.34■□□□□ 0.05
TOP2B-203ENST00000424225 ELF2Q15723 593 aa15.34■□□□□ 0.05
TOP2B-203ENST00000424225 USHBP1Q8N6Y0 703 aa15.34■□□□□ 0.05
TOP2B-203ENST00000424225 NUP62CLQ9H1M0 184 aa15.34■□□□□ 0.05
TOP2B-203ENST00000424225 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.34■□□□□ 0.05
TOP2B-203ENST00000424225 RBM8AQ9Y5S9 174 aaKnown RBP15.34■□□□□ 0.05
TOP2B-203ENST00000424225 PXDNLA1KZ92 1463 aa15.33■□□□□ 0.05
TOP2B-203ENST00000424225 UBTFL1P0CB47 393 aaPredicted RBP15.33■□□□□ 0.05
TOP2B-203ENST00000424225 PROSER3Q2NL68 480 aa15.33■□□□□ 0.05
TOP2B-203ENST00000424225 ILDR1Q86SU0 546 aaPredicted RBP15.33■□□□□ 0.05
TOP2B-203ENST00000424225 SETD1BQ9UPS6 1966 aaKnown RBP15.33■□□□□ 0.04
TOP2B-203ENST00000424225 RGPD2P0DJD1 1756 aa15.33■□□□□ 0.04
TOP2B-203ENST00000424225 SLC27A2O14975 620 aa15.33■□□□□ 0.04
TOP2B-203ENST00000424225 FEZ1Q99689 392 aa15.33■□□□□ 0.04
TOP2B-203ENST00000424225 CLSTN2Q9H4D0 955 aa15.33■□□□□ 0.04
TOP2B-203ENST00000424225 TRMT1Q9NXH9 659 aaKnown RBP15.33■□□□□ 0.04
TOP2B-203ENST00000424225 TECPR2O15040 1411 aa15.33■□□□□ 0.04
TOP2B-203ENST00000424225 SASH1O94885 1247 aa15.33■□□□□ 0.04
TOP2B-203ENST00000424225 LARP1BQ659C4 914 aaKnown RBP15.33■□□□□ 0.04
TOP2B-203ENST00000424225 LGR6Q9HBX8 967 aa15.33■□□□□ 0.04
TOP2B-203ENST00000424225 DIAPH3Q9NSV4 1193 aa15.33■□□□□ 0.04
TOP2B-203ENST00000424225 ELP1O95163 1332 aa15.32■□□□□ 0.04
TOP2B-203ENST00000424225 MAP3K5Q99683 1374 aa15.32■□□□□ 0.04
TOP2B-203ENST00000424225 NMIQ13287 307 aaPredicted RBP15.32■□□□□ 0.04
TOP2B-203ENST00000424225 MAP4K1Q92918 833 aa15.32■□□□□ 0.04
TOP2B-203ENST00000424225 KLHDC4Q8TBB5 520 aa15.32■□□□□ 0.04
TOP2B-203ENST00000424225 CHPF2Q9P2E5 772 aa15.31■□□□□ 0.04
TOP2B-203ENST00000424225 CLIP2Q9UDT6 1046 aa15.31■□□□□ 0.04
TOP2B-203ENST00000424225 CCDC171Q6TFL3 1326 aa15.31■□□□□ 0.04
TOP2B-203ENST00000424225 EPB41L2O43491 1005 aaKnown RBP15.31■□□□□ 0.04
TOP2B-203ENST00000424225 RESTQ13127 1097 aa15.31■□□□□ 0.04
TOP2B-203ENST00000424225 TAF7Q15545 349 aaPredicted RBP15.31■□□□□ 0.04
TOP2B-203ENST00000424225 KDM3BQ7LBC6 1761 aa15.31■□□□□ 0.04
TOP2B-203ENST00000424225 ZNF592Q92610 1267 aa15.31■□□□□ 0.04
TOP2B-203ENST00000424225 PTPRUQ92729 1446 aa15.31■□□□□ 0.04
TOP2B-203ENST00000424225 SEC62Q99442 399 aaKnown RBP15.31■□□□□ 0.04
TOP2B-203ENST00000424225 NPHP1O15259 732 aa15.31■□□□□ 0.04
TOP2B-203ENST00000424225 TRIM5Q9C035 493 aa15.31■□□□□ 0.04
TOP2B-203ENST00000424225 PI4KAP2A4QPH2 592 aa15.3■□□□□ 0.04
TOP2B-203ENST00000424225 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
TOP2B-203ENST00000424225 PTPN21Q16825 1174 aa15.3■□□□□ 0.04
TOP2B-203ENST00000424225 PI4KAP1Q8N8J0 262 aa15.3■□□□□ 0.04
TOP2B-203ENST00000424225 EAF2Q96CJ1 260 aaPredicted RBP15.3■□□□□ 0.04
TOP2B-203ENST00000424225 TNMDQ9H2S6 317 aa15.3■□□□□ 0.04
TOP2B-203ENST00000424225 FHOD1Q9Y613 1164 aa15.3■□□□□ 0.04
TOP2B-203ENST00000424225 RAB11FIP3O75154 756 aa15.3■□□□□ 0.04
TOP2B-203ENST00000424225 ZNF165P49910 485 aa15.3■□□□□ 0.04
TOP2B-203ENST00000424225 SYCP1Q15431 976 aa15.3■□□□□ 0.04
TOP2B-203ENST00000424225 CEP135Q66GS9 1140 aa15.3■□□□□ 0.04
TOP2B-203ENST00000424225 MED1Q15648 1581 aaPredicted RBP15.3■□□□□ 0.04
TOP2B-203ENST00000424225 KDM4FA0A1W2PPD8 638 aa15.3■□□□□ 0.04
TOP2B-203ENST00000424225 CTDNEP1O95476 244 aa15.3■□□□□ 0.04
TOP2B-203ENST00000424225 E4F1Q66K89 784 aaPredicted RBP15.3■□□□□ 0.04
TOP2B-203ENST00000424225 EPC1Q9H2F5 836 aa15.3■□□□□ 0.04
TOP2B-203ENST00000424225 CCDC30Q5VVM6 783 aa15.29■□□□□ 0.04
TOP2B-203ENST00000424225 NUTM2GQ5VZR2 741 aa15.29■□□□□ 0.04
TOP2B-203ENST00000424225 CEBPZQ03701 1054 aaKnown RBP15.29■□□□□ 0.04
TOP2B-203ENST00000424225 CWF19L2Q2TBE0 894 aaKnown RBP15.29■□□□□ 0.04
TOP2B-203ENST00000424225 LRRC2Q9BYS8 371 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms