RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 MKRN1Q9UHC7 482 aaKnown RBP7.07□□□□□ -1.28
CDC42EP3-202ENST00000422687 PCDHB9Q9Y5E1 797 aa7.07□□□□□ -1.28
CDC42EP3-202ENST00000422687 NHSL1Q5SYE7 1610 aa7.07□□□□□ -1.28
CDC42EP3-202ENST00000422687 NRXN3Q9Y4C0 1643 aa7.07□□□□□ -1.28
CDC42EP3-202ENST00000422687 E9PCH4 1651 aa7.06□□□□□ -1.28
CDC42EP3-202ENST00000422687 IQGAP3Q86VI3 1631 aa7.06□□□□□ -1.28
CDC42EP3-202ENST00000422687 ATP5J2-PTCD1G3V325 749 aa7.06□□□□□ -1.28
CDC42EP3-202ENST00000422687 ALDH1A1P00352 501 aa7.06□□□□□ -1.28
CDC42EP3-202ENST00000422687 NCOA4Q13772 614 aa7.06□□□□□ -1.28
CDC42EP3-202ENST00000422687 MAP7D1Q3KQU3 841 aa7.06□□□□□ -1.28
CDC42EP3-202ENST00000422687 PHLDB3Q6NSJ2 640 aa7.06□□□□□ -1.28
CDC42EP3-202ENST00000422687 SH3RF1Q7Z6J0 888 aa7.06□□□□□ -1.28
CDC42EP3-202ENST00000422687 RNF135Q8IUD6 432 aa7.06□□□□□ -1.28
CDC42EP3-202ENST00000422687 DEPDC4Q8N2C3 294 aa7.06□□□□□ -1.28
CDC42EP3-202ENST00000422687 ARHGAP9Q9BRR9 750 aa7.06□□□□□ -1.28
CDC42EP3-202ENST00000422687 QTRT2Q9H974 415 aaKnown RBP7.06□□□□□ -1.28
CDC42EP3-202ENST00000422687 ADGRL3Q9HAR2 1447 aa7.06□□□□□ -1.28
CDC42EP3-202ENST00000422687 METP08581 1390 aa7.06□□□□□ -1.28
CDC42EP3-202ENST00000422687 LAMC1P11047 1609 aa7.05□□□□□ -1.28
CDC42EP3-202ENST00000422687 PRAG1Q86YV5 1406 aa7.05□□□□□ -1.28
CDC42EP3-202ENST00000422687 HPS1Q92902 700 aa7.05□□□□□ -1.28
CDC42EP3-202ENST00000422687 FOXJ1Q92949 421 aa7.05□□□□□ -1.28
CDC42EP3-202ENST00000422687 CDK15Q96Q40 435 aa7.05□□□□□ -1.28
CDC42EP3-202ENST00000422687 C1QTNF2Q9BXJ5 285 aa7.05□□□□□ -1.28
CDC42EP3-202ENST00000422687 SOS2Q07890 1332 aaPredicted RBP7.04□□□□□ -1.28
CDC42EP3-202ENST00000422687 FAM50AQ14320 339 aaKnown RBP7.04□□□□□ -1.28
CDC42EP3-202ENST00000422687 C4orf48Q5BLP8 95 aa7.04□□□□□ -1.28
CDC42EP3-202ENST00000422687 BPHLQ86WA6 291 aaPredicted RBP7.04□□□□□ -1.28
CDC42EP3-202ENST00000422687 CLP1Q92989 425 aaKnown RBP7.04□□□□□ -1.28
CDC42EP3-202ENST00000422687 TLL2Q9Y6L7 1015 aa7.04□□□□□ -1.28
CDC42EP3-202ENST00000422687 C1orf167Q5SNV9 1468 aa7.04□□□□□ -1.28
CDC42EP3-202ENST00000422687 RASA1P20936 1047 aa7.03□□□□□ -1.28
CDC42EP3-202ENST00000422687 SSFA2P28290 1259 aa7.03□□□□□ -1.28
CDC42EP3-202ENST00000422687 LARP1Q6PKG0 1096 aaKnown RBP7.03□□□□□ -1.28
CDC42EP3-202ENST00000422687 DDX17Q92841 729 aaKnown RBP7.03□□□□□ -1.28
CDC42EP3-202ENST00000422687 C8orf37Q96NL8 207 aa7.03□□□□□ -1.28
CDC42EP3-202ENST00000422687 CDCA7Q9BWT1 371 aaPredicted RBP7.03□□□□□ -1.28
CDC42EP3-202ENST00000422687 NUP155O75694 1391 aa7.03□□□□□ -1.28
CDC42EP3-202ENST00000422687 ATRNO75882 1429 aa7.02□□□□□ -1.29
CDC42EP3-202ENST00000422687 PTCH1Q13635 1447 aa7.02□□□□□ -1.29
CDC42EP3-202ENST00000422687 DKK1O94907 266 aa7.02□□□□□ -1.29
CDC42EP3-202ENST00000422687 EML3Q32P44 896 aa7.02□□□□□ -1.29
CDC42EP3-202ENST00000422687 ZBTB33Q86T24 672 aa7.02□□□□□ -1.29
CDC42EP3-202ENST00000422687 ANKMY2Q8IV38 441 aa7.02□□□□□ -1.29
CDC42EP3-202ENST00000422687 TRMT44Q8IYL2 757 aaKnown RBP7.02□□□□□ -1.29
CDC42EP3-202ENST00000422687 NGLY1Q96IV0 654 aa7.02□□□□□ -1.29
CDC42EP3-202ENST00000422687 CCDC85AQ96PX6 553 aaPredicted RBP7.02□□□□□ -1.29
CDC42EP3-202ENST00000422687 DACH1Q9UI36 760 aa7.02□□□□□ -1.29
CDC42EP3-202ENST00000422687 WASF2Q9Y6W5 498 aa7.02□□□□□ -1.29
CDC42EP3-202ENST00000422687 ATAD2Q6PL18 1390 aa7.02□□□□□ -1.29
CDC42EP3-202ENST00000422687 NEXMIFQ5QGS0 1516 aa7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 MYOM2P54296 1465 aa7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 POTECB2RU33 542 aa7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 ADH1CP00326 375 aa7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 CLDN10P78369 228 aa7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 SWI5Q1ZZU3 235 aa7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 CCDC27Q2M243 656 aa7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 TSGA10IPQ3SY00 556 aa7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 ERFEQ4G0M1 354 aa7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 TRIM50Q86XT4 487 aa7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 OGFOD1Q8N543 542 aa7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 FAM200AQ8TCP9 573 aa7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 TRPC5Q9UL62 973 aaPredicted RBP7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 MAP4K5Q9Y4K4 846 aa7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 NALCNQ8IZF0 1738 aa7.01□□□□□ -1.29
CDC42EP3-202ENST00000422687 ROBO2Q9HCK4 1378 aa7□□□□□ -1.29
CDC42EP3-202ENST00000422687 FOXD4L5Q5VV16 416 aaPredicted RBP7□□□□□ -1.29
CDC42EP3-202ENST00000422687 DZIP3Q86Y13 1208 aaKnown RBP7□□□□□ -1.29
CDC42EP3-202ENST00000422687 CCDC125Q86Z20 511 aa7□□□□□ -1.29
CDC42EP3-202ENST00000422687 SIX5Q8N196 739 aa7□□□□□ -1.29
CDC42EP3-202ENST00000422687 CCER1Q8TC90 406 aaPredicted RBP7□□□□□ -1.29
CDC42EP3-202ENST00000422687 FOXD4L4Q8WXT5 416 aaPredicted RBP7□□□□□ -1.29
CDC42EP3-202ENST00000422687 ORAI2Q96SN7 254 aa7□□□□□ -1.29
CDC42EP3-202ENST00000422687 ATP13A2Q9NQ11 1180 aa7□□□□□ -1.29
CDC42EP3-202ENST00000422687 USP21Q9UK80 565 aa7□□□□□ -1.29
CDC42EP3-202ENST00000422687 COL22A1Q8NFW1 1626 aaPredicted RBP7□□□□□ -1.29
CDC42EP3-202ENST00000422687 BCL9LQ86UU0 1499 aa6.99□□□□□ -1.29
CDC42EP3-202ENST00000422687 ESPNB1AK53 854 aa6.99□□□□□ -1.29
CDC42EP3-202ENST00000422687 ADAMTS2O95450 1211 aa6.99□□□□□ -1.29
CDC42EP3-202ENST00000422687 ATP1A2P50993 1020 aa6.99□□□□□ -1.29
CDC42EP3-202ENST00000422687 DPYDQ12882 1025 aa6.99□□□□□ -1.29
CDC42EP3-202ENST00000422687 NNTQ13423 1086 aa6.99□□□□□ -1.29
CDC42EP3-202ENST00000422687 AGERQ15109 404 aa6.99□□□□□ -1.29
CDC42EP3-202ENST00000422687 LARGE2Q8N3Y3 721 aa6.99□□□□□ -1.29
CDC42EP3-202ENST00000422687 DNAAF2Q9NVR5 837 aaKnown RBP6.99□□□□□ -1.29
CDC42EP3-202ENST00000422687 NOD1Q9Y239 953 aa6.99□□□□□ -1.29
CDC42EP3-202ENST00000422687 ZBTB7BO15156 539 aaPredicted RBP6.98□□□□□ -1.29
CDC42EP3-202ENST00000422687 NR5A1Q13285 461 aa6.98□□□□□ -1.29
CDC42EP3-202ENST00000422687 C1orf216Q8TAB5 229 aa6.98□□□□□ -1.29
CDC42EP3-202ENST00000422687 KLF16Q9BXK1 252 aaPredicted RBP6.98□□□□□ -1.29
CDC42EP3-202ENST00000422687 CARD14Q9BXL6 1004 aa6.98□□□□□ -1.29
CDC42EP3-202ENST00000422687 GMPR2Q9P2T1 348 aaKnown RBP6.98□□□□□ -1.29
CDC42EP3-202ENST00000422687 DOLKQ9UPQ8 538 aa6.98□□□□□ -1.29
CDC42EP3-202ENST00000422687 KIAA1024Q9UPX6 916 aa6.98□□□□□ -1.29
CDC42EP3-202ENST00000422687 HFM1A2PYH4 1435 aa6.98□□□□□ -1.29
CDC42EP3-202ENST00000422687 SPHKAPQ2M3C7 1700 aa6.98□□□□□ -1.29
CDC42EP3-202ENST00000422687 PXDNQ92626 1479 aa6.98□□□□□ -1.29
CDC42EP3-202ENST00000422687 CLTCL1P53675 1640 aa6.98□□□□□ -1.29
CDC42EP3-202ENST00000422687 MAGEB6P1A0A0J9YX57 407 aa6.97□□□□□ -1.29
CDC42EP3-202ENST00000422687 CAPN5O15484 640 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms