RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 DNAAF4Q8WXU2 420 aa11.81□□□□□ -0.52
PDGFC-202ENST00000422544 ISCA1Q9BUE6 129 aa11.81□□□□□ -0.52
PDGFC-202ENST00000422544 GTF2E1P29083 439 aaPredicted RBP11.8□□□□□ -0.52
PDGFC-202ENST00000422544 BRPF1P55201 1214 aaPredicted RBP11.8□□□□□ -0.52
PDGFC-202ENST00000422544 TRIM28Q13263 835 aaKnown RBP11.8□□□□□ -0.52
PDGFC-202ENST00000422544 PARP10Q53GL7 1025 aa11.8□□□□□ -0.52
PDGFC-202ENST00000422544 PRR5LQ6MZQ0 368 aa11.8□□□□□ -0.52
PDGFC-202ENST00000422544 CNBD1Q8NA66 436 aa11.8□□□□□ -0.52
PDGFC-202ENST00000422544 UTP14AQ9BVJ6 771 aaKnown RBP11.8□□□□□ -0.52
PDGFC-202ENST00000422544 PTPRCP08575 1304 aa11.8□□□□□ -0.52
PDGFC-202ENST00000422544 IGKV5-2P06315 115 aa11.79□□□□□ -0.52
PDGFC-202ENST00000422544 NEXNQ0ZGT2 675 aa11.79□□□□□ -0.52
PDGFC-202ENST00000422544 CWF19L2Q2TBE0 894 aaKnown RBP11.79□□□□□ -0.52
PDGFC-202ENST00000422544 SLC4A10Q6U841 1118 aa11.79□□□□□ -0.52
PDGFC-202ENST00000422544 PPP1R42Q7Z4L9 355 aa11.79□□□□□ -0.52
PDGFC-202ENST00000422544 NUTM1Q86Y26 1132 aa11.79□□□□□ -0.52
PDGFC-202ENST00000422544 FRAT1Q92837 279 aaPredicted RBP11.79□□□□□ -0.52
PDGFC-202ENST00000422544 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
PDGFC-202ENST00000422544 RCAN3Q9UKA8 241 aa11.79□□□□□ -0.52
PDGFC-202ENST00000422544 CD2APQ9Y5K6 639 aa11.79□□□□□ -0.52
PDGFC-202ENST00000422544 SCN7AQ01118 1682 aa11.78□□□□□ -0.52
PDGFC-202ENST00000422544 NEURL1BA8MQ27 555 aa11.78□□□□□ -0.52
PDGFC-202ENST00000422544 NTSR2O95665 410 aa11.78□□□□□ -0.52
PDGFC-202ENST00000422544 ST5P78524 1137 aa11.78□□□□□ -0.52
PDGFC-202ENST00000422544 ERFEQ4G0M1 354 aa11.78□□□□□ -0.52
PDGFC-202ENST00000422544 BEND3Q5T5X7 828 aa11.78□□□□□ -0.52
PDGFC-202ENST00000422544 SYNE4Q8N205 404 aa11.78□□□□□ -0.52
PDGFC-202ENST00000422544 CCDC191Q8NCU4 936 aa11.78□□□□□ -0.52
PDGFC-202ENST00000422544 JARID2Q92833 1246 aaPredicted RBP11.78□□□□□ -0.52
PDGFC-202ENST00000422544 NYXQ9GZU5 481 aa11.78□□□□□ -0.52
PDGFC-202ENST00000422544 CWC25Q9NXE8 425 aaPredicted RBP11.78□□□□□ -0.52
PDGFC-202ENST00000422544 TRMT112Q9UI30 125 aaKnown RBP11.78□□□□□ -0.52
PDGFC-202ENST00000422544 SBF1O95248 1867 aa11.77□□□□□ -0.53
PDGFC-202ENST00000422544 IPO8O15397 1037 aaKnown RBP11.77□□□□□ -0.53
PDGFC-202ENST00000422544 RTL5Q5HYW3 569 aaPredicted RBP11.77□□□□□ -0.53
PDGFC-202ENST00000422544 LINS1Q8NG48 757 aa11.77□□□□□ -0.53
PDGFC-202ENST00000422544 ARHGAP45Q92619 1136 aa11.77□□□□□ -0.53
PDGFC-202ENST00000422544 FAM89AQ96GI7 184 aa11.77□□□□□ -0.53
PDGFC-202ENST00000422544 BRIP1Q9BX63 1249 aa11.77□□□□□ -0.53
PDGFC-202ENST00000422544 API5Q9BZZ5 524 aaKnown RBP11.77□□□□□ -0.53
PDGFC-202ENST00000422544 KIF16BQ96L93 1317 aa11.77□□□□□ -0.53
PDGFC-202ENST00000422544 BCORQ6W2J9 1755 aa11.77□□□□□ -0.53
PDGFC-202ENST00000422544 A0A0G2JLW4 131 aa11.76□□□□□ -0.53
PDGFC-202ENST00000422544 GRIN3BO60391 1043 aa11.76□□□□□ -0.53
PDGFC-202ENST00000422544 ZNF526Q8TF50 670 aaPredicted RBP11.76□□□□□ -0.53
PDGFC-202ENST00000422544 TNNQ9UQP3 1299 aa11.76□□□□□ -0.53
PDGFC-202ENST00000422544 SH3TC1Q8TE82 1336 aa11.76□□□□□ -0.53
PDGFC-202ENST00000422544 NUP98P52948 1817 aa11.75□□□□□ -0.53
PDGFC-202ENST00000422544 HCLS1P14317 486 aaPredicted RBP11.75□□□□□ -0.53
PDGFC-202ENST00000422544 TRIM27P14373 513 aa11.75□□□□□ -0.53
PDGFC-202ENST00000422544 DPEP1P16444 411 aa11.75□□□□□ -0.53
PDGFC-202ENST00000422544 CHRNA5P30532 468 aa11.75□□□□□ -0.53
PDGFC-202ENST00000422544 PDE6BP35913 854 aa11.75□□□□□ -0.53
PDGFC-202ENST00000422544 TGFB2P61812 414 aa11.75□□□□□ -0.53
PDGFC-202ENST00000422544 GCKRQ14397 625 aa11.75□□□□□ -0.53
PDGFC-202ENST00000422544 SLC10A5Q5PT55 438 aa11.75□□□□□ -0.53
PDGFC-202ENST00000422544 ZKSCAN2Q63HK3 967 aa11.75□□□□□ -0.53
PDGFC-202ENST00000422544 ATF7IPQ6VMQ6 1270 aa11.75□□□□□ -0.53
PDGFC-202ENST00000422544 ZBTB38Q8NAP3 1195 aaPredicted RBP11.75□□□□□ -0.53
PDGFC-202ENST00000422544 SRCIN1Q9C0H9 1055 aa11.75□□□□□ -0.53
PDGFC-202ENST00000422544 FOXD4L1Q9NU39 408 aa11.75□□□□□ -0.53
PDGFC-202ENST00000422544 ABCC12Q96J65 1359 aa11.75□□□□□ -0.53
PDGFC-202ENST00000422544 IBTKQ9P2D0 1353 aaPredicted RBP11.75□□□□□ -0.53
PDGFC-202ENST00000422544 C10orf71Q711Q0 1435 aa11.75□□□□□ -0.53
PDGFC-202ENST00000422544 H7C1W4 665 aa11.74□□□□□ -0.53
PDGFC-202ENST00000422544 IRS4O14654 1257 aaPredicted RBP11.74□□□□□ -0.53
PDGFC-202ENST00000422544 ALDH1L1O75891 902 aa11.74□□□□□ -0.53
PDGFC-202ENST00000422544 PCCAP05165 728 aaPredicted RBP11.74□□□□□ -0.53
PDGFC-202ENST00000422544 C3orf67Q6ZVT6 689 aa11.74□□□□□ -0.53
PDGFC-202ENST00000422544 C2CD5Q86YS7 1000 aa11.74□□□□□ -0.53
PDGFC-202ENST00000422544 CLUAP1Q96AJ1 413 aa11.74□□□□□ -0.53
PDGFC-202ENST00000422544 GPBP1L1Q9HC44 474 aaPredicted RBP11.74□□□□□ -0.53
PDGFC-202ENST00000422544 WWC3Q9ULE0 1092 aa11.74□□□□□ -0.53
PDGFC-202ENST00000422544 ARFGEF1Q9Y6D6 1849 aa11.74□□□□□ -0.53
PDGFC-202ENST00000422544 H0YIN7 160 aa11.73□□□□□ -0.53
PDGFC-202ENST00000422544 PLIN1O60240 522 aa11.73□□□□□ -0.53
PDGFC-202ENST00000422544 KCNA3P22001 575 aa11.73□□□□□ -0.53
PDGFC-202ENST00000422544 RNF123Q5XPI4 1314 aa11.73□□□□□ -0.53
PDGFC-202ENST00000422544 UBE3BQ7Z3V4 1068 aa11.73□□□□□ -0.53
PDGFC-202ENST00000422544 NLRP3Q96P20 1036 aa11.73□□□□□ -0.53
PDGFC-202ENST00000422544 CACNA1FO60840 1977 aa11.72□□□□□ -0.53
PDGFC-202ENST00000422544 KLRG2A4D1S0 409 aaPredicted RBP11.72□□□□□ -0.53
PDGFC-202ENST00000422544 CCT4P50991 539 aaKnown RBP11.72□□□□□ -0.53
PDGFC-202ENST00000422544 ZNF622Q969S3 477 aaKnown RBP eCLIP11.72□□□□□ -0.53
PDGFC-202ENST00000422544 C9orf78Q9NZ63 289 aaPredicted RBP11.72□□□□□ -0.53
PDGFC-202ENST00000422544 ARFGEF2Q9Y6D5 1785 aa11.72□□□□□ -0.53
PDGFC-202ENST00000422544 ABCC4O15439 1325 aa11.71□□□□□ -0.53
PDGFC-202ENST00000422544 GRM8O00222 908 aa11.71□□□□□ -0.53
PDGFC-202ENST00000422544 SRGNP10124 158 aa11.71□□□□□ -0.53
PDGFC-202ENST00000422544 CASP7P55210 303 aa11.71□□□□□ -0.53
PDGFC-202ENST00000422544 HTRA3P83110 453 aa11.71□□□□□ -0.53
PDGFC-202ENST00000422544 COL13A1Q5TAT6 717 aaPredicted RBP11.71□□□□□ -0.53
PDGFC-202ENST00000422544 INTS3Q68E01 1043 aaKnown RBP11.71□□□□□ -0.53
PDGFC-202ENST00000422544 DZIP1LQ8IYY4 767 aaKnown RBP11.71□□□□□ -0.53
PDGFC-202ENST00000422544 TMEM57Q8N5G2 664 aa11.71□□□□□ -0.53
PDGFC-202ENST00000422544 PIM2Q9P1W9 311 aa11.71□□□□□ -0.53
PDGFC-202ENST00000422544 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.53
PDGFC-202ENST00000422544 PXDNLA1KZ92 1463 aa11.7□□□□□ -0.54
PDGFC-202ENST00000422544 AFDNP55196 1824 aaKnown RBP11.7□□□□□ -0.54
PDGFC-202ENST00000422544 CDHR2Q9BYE9 1310 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms