RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 NUP98P52948 1817 aa11.17□□□□□ -0.62
MDC1-204ENST00000422266 NTSR2O95665 410 aa11.17□□□□□ -0.62
MDC1-204ENST00000422266 DDX58O95786 925 aaKnown RBP11.17□□□□□ -0.62
MDC1-204ENST00000422266 HSPA6P17066 643 aa11.17□□□□□ -0.62
MDC1-204ENST00000422266 HOXA10P31260 410 aaPredicted RBP11.17□□□□□ -0.62
MDC1-204ENST00000422266 FKBP4Q02790 459 aaKnown RBP eCLIP11.17□□□□□ -0.62
MDC1-204ENST00000422266 GOLGA2Q08379 1002 aa11.17□□□□□ -0.62
MDC1-204ENST00000422266 FSTL1Q12841 308 aa11.17□□□□□ -0.62
MDC1-204ENST00000422266 SLC10A5Q5PT55 438 aa11.17□□□□□ -0.62
MDC1-204ENST00000422266 CCDC30Q5VVM6 783 aa11.17□□□□□ -0.62
MDC1-204ENST00000422266 SUSD4Q5VX71 490 aa11.17□□□□□ -0.62
MDC1-204ENST00000422266 NUTM1Q86Y26 1132 aa11.17□□□□□ -0.62
MDC1-204ENST00000422266 NECTIN2Q92692 538 aa11.17□□□□□ -0.62
MDC1-204ENST00000422266 CRAMP1Q96RY5 1269 aa11.17□□□□□ -0.62
MDC1-204ENST00000422266 SBF1O95248 1867 aa11.17□□□□□ -0.62
MDC1-204ENST00000422266 IL16Q14005 1332 aa11.16□□□□□ -0.62
MDC1-204ENST00000422266 PROSER3Q2NL68 480 aa11.16□□□□□ -0.62
MDC1-204ENST00000422266 C7orf43Q8WVR3 580 aa11.16□□□□□ -0.62
MDC1-204ENST00000422266 ZNF219Q9P2Y4 722 aaPredicted RBP11.16□□□□□ -0.62
MDC1-204ENST00000422266 TRMT112Q9UI30 125 aaKnown RBP11.16□□□□□ -0.62
MDC1-204ENST00000422266 ARFGEF2Q9Y6D5 1785 aa11.16□□□□□ -0.62
MDC1-204ENST00000422266 SH3TC1Q8TE82 1336 aa11.15□□□□□ -0.62
MDC1-204ENST00000422266 ANXA1P04083 346 aa11.15□□□□□ -0.62
MDC1-204ENST00000422266 APLP1P51693 650 aa11.15□□□□□ -0.62
MDC1-204ENST00000422266 TRIM28Q13263 835 aaKnown RBP11.15□□□□□ -0.62
MDC1-204ENST00000422266 TMC4Q7Z404 712 aa11.15□□□□□ -0.62
MDC1-204ENST00000422266 RIC3Q7Z5B4 369 aa11.15□□□□□ -0.62
MDC1-204ENST00000422266 NLRP10Q86W26 655 aa11.15□□□□□ -0.62
MDC1-204ENST00000422266 PSMD1Q99460 953 aa11.15□□□□□ -0.62
MDC1-204ENST00000422266 STK31Q9BXU1 1019 aa11.15□□□□□ -0.62
MDC1-204ENST00000422266 VPS33BQ9H267 617 aa11.15□□□□□ -0.62
MDC1-204ENST00000422266 NMRK2Q9NPI5 230 aa11.15□□□□□ -0.62
MDC1-204ENST00000422266 COL11A2P13942 1736 aaPredicted RBP11.15□□□□□ -0.63
MDC1-204ENST00000422266 TNRC6CQ9HCJ0 1690 aaKnown RBP11.14□□□□□ -0.63
MDC1-204ENST00000422266 IQCA1LA6NCM1 817 aa11.14□□□□□ -0.63
MDC1-204ENST00000422266 BBOX1O75936 387 aa11.14□□□□□ -0.63
MDC1-204ENST00000422266 KRT24Q2M2I5 525 aa11.14□□□□□ -0.63
MDC1-204ENST00000422266 WDR63Q8IWG1 891 aa11.14□□□□□ -0.63
MDC1-204ENST00000422266 WWC1Q8IX03 1113 aa11.14□□□□□ -0.63
MDC1-204ENST00000422266 SMC1BQ8NDV3 1235 aa11.14□□□□□ -0.63
MDC1-204ENST00000422266 SUPT20HQ8NEM7 779 aa11.14□□□□□ -0.63
MDC1-204ENST00000422266 JDP2Q8WYK2 163 aa11.14□□□□□ -0.63
MDC1-204ENST00000422266 RRAGCQ9HB90 399 aa11.14□□□□□ -0.63
MDC1-204ENST00000422266 FER1L6Q2WGJ9 1857 aa11.14□□□□□ -0.63
MDC1-204ENST00000422266 ABCC12Q96J65 1359 aa11.14□□□□□ -0.63
MDC1-204ENST00000422266 SLX4Q8IY92 1834 aa11.14□□□□□ -0.63
MDC1-204ENST00000422266 PPEF1O14829 653 aaPredicted RBP11.13□□□□□ -0.63
MDC1-204ENST00000422266 DDX46Q7L014 1031 aaKnown RBP11.13□□□□□ -0.63
MDC1-204ENST00000422266 IARSP41252 1262 aaKnown RBP11.12□□□□□ -0.63
MDC1-204ENST00000422266 ISCA1Q9BUE6 129 aa11.12□□□□□ -0.63
MDC1-204ENST00000422266 DICER1Q9UPY3 1922 aaKnown RBP11.11□□□□□ -0.63
MDC1-204ENST00000422266 ELL2O00472 640 aaPredicted RBP11.11□□□□□ -0.63
MDC1-204ENST00000422266 EIF6P56537 245 aaKnown RBP11.11□□□□□ -0.63
MDC1-204ENST00000422266 NEXNQ0ZGT2 675 aa11.11□□□□□ -0.63
MDC1-204ENST00000422266 SYNE4Q8N205 404 aa11.11□□□□□ -0.63
MDC1-204ENST00000422266 CCDC191Q8NCU4 936 aa11.11□□□□□ -0.63
MDC1-204ENST00000422266 ATP6V0A2Q9Y487 856 aa11.11□□□□□ -0.63
MDC1-204ENST00000422266 PRELPP51888 382 aa11.1□□□□□ -0.63
MDC1-204ENST00000422266 GRAPQ13588 217 aa11.1□□□□□ -0.63
MDC1-204ENST00000422266 TWISTNBQ3B726 338 aaPredicted RBP11.1□□□□□ -0.63
MDC1-204ENST00000422266 CCDC184Q52MB2 194 aa11.1□□□□□ -0.63
MDC1-204ENST00000422266 SP8Q8IXZ3 490 aa11.1□□□□□ -0.63
MDC1-204ENST00000422266 ZBTB38Q8NAP3 1195 aaPredicted RBP11.1□□□□□ -0.63
MDC1-204ENST00000422266 C8orf58Q8NAV2 365 aa11.1□□□□□ -0.63
MDC1-204ENST00000422266 GRAPLQ8TC17 118 aaPredicted RBP11.1□□□□□ -0.63
MDC1-204ENST00000422266 L3MBTL3Q96JM7 780 aaPredicted RBP11.1□□□□□ -0.63
MDC1-204ENST00000422266 MYH16Q9H6N6 1097 aa11.1□□□□□ -0.63
MDC1-204ENST00000422266 ZNF277Q9NRM2 450 aaPredicted RBP11.1□□□□□ -0.63
MDC1-204ENST00000422266 ANKRD36CQ5JPF3 1778 aa11.1□□□□□ -0.63
MDC1-204ENST00000422266 CCDC88AQ3V6T2 1871 aa11.1□□□□□ -0.63
MDC1-204ENST00000422266 TIAM2Q8IVF5 1701 aa11.09□□□□□ -0.63
MDC1-204ENST00000422266 CACNA1SQ13698 1873 aa11.09□□□□□ -0.63
MDC1-204ENST00000422266 FZD9O00144 591 aa11.09□□□□□ -0.63
MDC1-204ENST00000422266 HCLS1P14317 486 aaPredicted RBP11.09□□□□□ -0.63
MDC1-204ENST00000422266 SF3B3Q15393 1217 aaKnown RBP11.09□□□□□ -0.63
MDC1-204ENST00000422266 PNMA8AQ86V59 439 aaPredicted RBP11.09□□□□□ -0.63
MDC1-204ENST00000422266 GPC2Q8N158 579 aa11.09□□□□□ -0.63
MDC1-204ENST00000422266 LARGE2Q8N3Y3 721 aa11.09□□□□□ -0.63
MDC1-204ENST00000422266 CWC25Q9NXE8 425 aaPredicted RBP11.09□□□□□ -0.63
MDC1-204ENST00000422266 WDR90Q96KV7 1748 aa11.09□□□□□ -0.63
MDC1-204ENST00000422266 ABCC4O15439 1325 aa11.09□□□□□ -0.63
MDC1-204ENST00000422266 ATP5J2-PTCD1G3V325 749 aa11.08□□□□□ -0.64
MDC1-204ENST00000422266 IRS4O14654 1257 aaPredicted RBP11.08□□□□□ -0.64
MDC1-204ENST00000422266 DDNO94850 711 aaPredicted RBP11.08□□□□□ -0.64
MDC1-204ENST00000422266 PCCAP05165 728 aaPredicted RBP11.08□□□□□ -0.64
MDC1-204ENST00000422266 DPP8Q6V1X1 898 aaPredicted RBP11.08□□□□□ -0.64
MDC1-204ENST00000422266 KSR2Q6VAB6 950 aa11.08□□□□□ -0.64
MDC1-204ENST00000422266 NIM1KQ8IY84 436 aa11.08□□□□□ -0.64
MDC1-204ENST00000422266 FAM9BQ8IZU0 186 aa11.08□□□□□ -0.64
MDC1-204ENST00000422266 MPNDQ8N594 471 aa11.08□□□□□ -0.64
MDC1-204ENST00000422266 TSR2Q969E8 191 aaKnown RBP11.08□□□□□ -0.64
MDC1-204ENST00000422266 FAM89AQ96GI7 184 aa11.08□□□□□ -0.64
MDC1-204ENST00000422266 METTL22Q9BUU2 404 aaPredicted RBP11.08□□□□□ -0.64
MDC1-204ENST00000422266 RTFDC1Q9BY42 306 aaPredicted RBP11.08□□□□□ -0.64
MDC1-204ENST00000422266 PHAXQ9H814 394 aaKnown RBP11.08□□□□□ -0.64
MDC1-204ENST00000422266 LMOD1P29536 600 aaPredicted RBP11.07□□□□□ -0.64
MDC1-204ENST00000422266 CCDC152Q4G0S7 254 aa11.07□□□□□ -0.64
MDC1-204ENST00000422266 MYD88Q99836 296 aa11.07□□□□□ -0.64
MDC1-204ENST00000422266 HACL1Q9UJ83 578 aa11.07□□□□□ -0.64
MDC1-204ENST00000422266 PPIP5K2O43314 1243 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms