RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 IGFLR1Q9H665 355 aa9.34□□□□□ -0.91
SFXN1-202ENST00000421887 RSF1Q96T23 1441 aaPredicted RBP9.33□□□□□ -0.92
SFXN1-202ENST00000421887 PSME1Q06323 249 aa9.33□□□□□ -0.92
SFXN1-202ENST00000421887 TEAD4Q15561 434 aa9.33□□□□□ -0.92
SFXN1-202ENST00000421887 CEP63Q96MT8 703 aa9.33□□□□□ -0.92
SFXN1-202ENST00000421887 JPH1Q9HDC5 661 aaPredicted RBP9.33□□□□□ -0.92
SFXN1-202ENST00000421887 BRD7Q9NPI1 651 aa9.33□□□□□ -0.92
SFXN1-202ENST00000421887 PRDM2Q13029 1718 aa9.33□□□□□ -0.92
SFXN1-202ENST00000421887 NUDT8Q8WV74 236 aa9.32□□□□□ -0.92
SFXN1-202ENST00000421887 BHMTQ93088 406 aa9.32□□□□□ -0.92
SFXN1-202ENST00000421887 ZNF358Q9NW07 568 aa9.32□□□□□ -0.92
SFXN1-202ENST00000421887 EIF4G3O43432 1585 aaKnown RBP9.32□□□□□ -0.92
SFXN1-202ENST00000421887 SLC9A9Q8IVB4 645 aa9.31□□□□□ -0.92
SFXN1-202ENST00000421887 UBE2OQ9C0C9 1292 aaKnown RBP9.31□□□□□ -0.92
SFXN1-202ENST00000421887 SFI1A8K8P3 1242 aa9.3□□□□□ -0.92
SFXN1-202ENST00000421887 EML3Q32P44 896 aa9.3□□□□□ -0.92
SFXN1-202ENST00000421887 SH3PXD2AQ5TCZ1 1133 aa9.3□□□□□ -0.92
SFXN1-202ENST00000421887 C7orf43Q8WVR3 580 aa9.3□□□□□ -0.92
SFXN1-202ENST00000421887 KCNH4Q9UQ05 1017 aa9.3□□□□□ -0.92
SFXN1-202ENST00000421887 SERTM1A2A2V5 107 aa9.29□□□□□ -0.92
SFXN1-202ENST00000421887 ABL2P42684 1182 aa9.29□□□□□ -0.92
SFXN1-202ENST00000421887 GTF2IP78347 998 aa9.29□□□□□ -0.92
SFXN1-202ENST00000421887 DMRTC2Q8IXT2 367 aaPredicted RBP9.29□□□□□ -0.92
SFXN1-202ENST00000421887 TNS4Q8IZW8 715 aa9.29□□□□□ -0.92
SFXN1-202ENST00000421887 HSH2DQ96JZ2 352 aa9.29□□□□□ -0.92
SFXN1-202ENST00000421887 NOD1Q9Y239 953 aa9.29□□□□□ -0.92
SFXN1-202ENST00000421887 GPC6Q9Y625 555 aaPredicted RBP9.29□□□□□ -0.92
SFXN1-202ENST00000421887 PIK3CDO00329 1044 aa9.28□□□□□ -0.92
SFXN1-202ENST00000421887 MCTP1Q6DN14 999 aa9.28□□□□□ -0.92
SFXN1-202ENST00000421887 GDPD2Q9HCC8 539 aa9.28□□□□□ -0.92
SFXN1-202ENST00000421887 ANKIB1Q9P2G1 1089 aa9.27□□□□□ -0.93
SFXN1-202ENST00000421887 SLC6A14Q9UN76 642 aa9.27□□□□□ -0.93
SFXN1-202ENST00000421887 KRTAP4-8A0A0G2JLE6 195 aa9.26□□□□□ -0.93
SFXN1-202ENST00000421887 WASHC4Q2M389 1173 aa9.26□□□□□ -0.93
SFXN1-202ENST00000421887 FMR1NBQ8N0W7 255 aaPredicted RBP9.26□□□□□ -0.93
SFXN1-202ENST00000421887 SSBP4Q9BWG4 385 aaPredicted RBP9.26□□□□□ -0.93
SFXN1-202ENST00000421887 RNF112Q9ULX5 631 aa9.26□□□□□ -0.93
SFXN1-202ENST00000421887 HCN4Q9Y3Q4 1203 aa9.26□□□□□ -0.93
SFXN1-202ENST00000421887 SKIP12755 728 aa9.25□□□□□ -0.93
SFXN1-202ENST00000421887 AFF1P51825 1210 aaKnown RBP9.25□□□□□ -0.93
SFXN1-202ENST00000421887 ABCC8Q09428 1581 aa9.24□□□□□ -0.93
SFXN1-202ENST00000421887 EPHA4P54764 986 aa9.24□□□□□ -0.93
SFXN1-202ENST00000421887 KCNQ4P56696 695 aa9.24□□□□□ -0.93
SFXN1-202ENST00000421887 PSAPL1Q6NUJ1 521 aa9.24□□□□□ -0.93
SFXN1-202ENST00000421887 ZNF280CQ8ND82 737 aa9.24□□□□□ -0.93
SFXN1-202ENST00000421887 TOPBP1Q92547 1522 aa9.24□□□□□ -0.93
SFXN1-202ENST00000421887 AQRO60306 1485 aaKnown RBP eCLIP9.23□□□□□ -0.933e-7■■□□□ 11.6
SFXN1-202ENST00000421887 IREB2P48200 963 aaKnown RBP9.23□□□□□ -0.93
SFXN1-202ENST00000421887 TYRO3Q06418 890 aa9.23□□□□□ -0.93
SFXN1-202ENST00000421887 PHACTR1Q9C0D0 580 aa9.23□□□□□ -0.93
SFXN1-202ENST00000421887 PCMTD2Q9NV79 361 aa9.23□□□□□ -0.93
SFXN1-202ENST00000421887 CHMP3Q9Y3E7 222 aa9.23□□□□□ -0.93
SFXN1-202ENST00000421887 PAX4O43316 350 aa9.22□□□□□ -0.93
SFXN1-202ENST00000421887 RGS9O75916 674 aaPredicted RBP9.22□□□□□ -0.93
SFXN1-202ENST00000421887 SOX11P35716 441 aa9.22□□□□□ -0.93
SFXN1-202ENST00000421887 WFDC12Q8WWY7 111 aa9.22□□□□□ -0.93
SFXN1-202ENST00000421887 NCOA4Q13772 614 aa9.21□□□□□ -0.94
SFXN1-202ENST00000421887 C1orf53Q5VUE5 145 aa9.21□□□□□ -0.94
SFXN1-202ENST00000421887 SUSD3Q96L08 255 aa9.21□□□□□ -0.94
SFXN1-202ENST00000421887 DNAJB12Q9NXW2 375 aaKnown RBP9.21□□□□□ -0.94
SFXN1-202ENST00000421887 COBLO75128 1261 aa9.2□□□□□ -0.94
SFXN1-202ENST00000421887 TOP2AP11388 1531 aaKnown RBP9.2□□□□□ -0.94
SFXN1-202ENST00000421887 SYNJ1O43426 1573 aa9.2□□□□□ -0.94
SFXN1-202ENST00000421887 PSMA6P60900 246 aaKnown RBP9.19□□□□□ -0.94
SFXN1-202ENST00000421887 DEPDC4Q8N2C3 294 aa9.19□□□□□ -0.94
SFXN1-202ENST00000421887 PNMA5Q96PV4 448 aa9.19□□□□□ -0.94
SFXN1-202ENST00000421887 TSPAN10Q9H1Z9 355 aaPredicted RBP9.19□□□□□ -0.94
SFXN1-202ENST00000421887 NAGPAQ9UK23 515 aa9.19□□□□□ -0.94
SFXN1-202ENST00000421887 DNMBPQ6XZF7 1577 aa9.19□□□□□ -0.94
SFXN1-202ENST00000421887 NOS3P29474 1203 aa9.18□□□□□ -0.94
SFXN1-202ENST00000421887 BRPF1P55201 1214 aaPredicted RBP9.18□□□□□ -0.94
SFXN1-202ENST00000421887 TARBP1Q13395 1621 aaKnown RBP9.18□□□□□ -0.94
SFXN1-202ENST00000421887 CHMP7Q8WUX9 453 aaPredicted RBP9.18□□□□□ -0.94
SFXN1-202ENST00000421887 COL17A1Q9UMD9 1497 aaPredicted RBP9.17□□□□□ -0.94
SFXN1-202ENST00000421887 LZTS3O60299 673 aaPredicted RBP9.17□□□□□ -0.94
SFXN1-202ENST00000421887 SSTR4P31391 388 aa9.17□□□□□ -0.94
SFXN1-202ENST00000421887 TXKP42681 527 aa9.17□□□□□ -0.94
SFXN1-202ENST00000421887 MSL1Q68DK7 614 aa9.17□□□□□ -0.94
SFXN1-202ENST00000421887 TPCN2Q8NHX9 752 aa9.17□□□□□ -0.94
SFXN1-202ENST00000421887 CLASP1Q7Z460 1538 aa9.16□□□□□ -0.94
SFXN1-202ENST00000421887 PRR23CQ6ZRP0 262 aa9.16□□□□□ -0.94
SFXN1-202ENST00000421887 BTLAQ7Z6A9 289 aa9.16□□□□□ -0.94
SFXN1-202ENST00000421887 MEGF10Q96KG7 1140 aa9.16□□□□□ -0.94
SFXN1-202ENST00000421887 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.16□□□□□ -0.94
SFXN1-202ENST00000421887 CPB1P15086 417 aa9.15□□□□□ -0.94
SFXN1-202ENST00000421887 FAM35AQ86V20 835 aa9.15□□□□□ -0.94
SFXN1-202ENST00000421887 FBXO11Q86XK2 927 aa9.15□□□□□ -0.94
SFXN1-202ENST00000421887 GAPVD1Q14C86 1478 aa9.15□□□□□ -0.95
SFXN1-202ENST00000421887 NFKB1P19838 968 aa9.14□□□□□ -0.95
SFXN1-202ENST00000421887 DTWD1Q8N5C7 304 aa9.14□□□□□ -0.95
SFXN1-202ENST00000421887 GSX2Q9BZM3 304 aa9.14□□□□□ -0.95
SFXN1-202ENST00000421887 IRAK1P51617 712 aa9.13□□□□□ -0.95
SFXN1-202ENST00000421887 HIRAP54198 1017 aaPredicted RBP9.13□□□□□ -0.95
SFXN1-202ENST00000421887 CCDC102BQ68D86 513 aa9.13□□□□□ -0.95
SFXN1-202ENST00000421887 IGF2-ASQ6U949 168 aa9.13□□□□□ -0.95
SFXN1-202ENST00000421887 ILDR2Q71H61 639 aa9.13□□□□□ -0.95
SFXN1-202ENST00000421887 EFCC1Q9HA90 598 aa9.13□□□□□ -0.95
SFXN1-202ENST00000421887 SNAPC4Q5SXM2 1469 aa9.13□□□□□ -0.95
SFXN1-202ENST00000421887 USP17L5A8MUK1 530 aa9.12□□□□□ -0.95
SFXN1-202ENST00000421887 PPP1R12BO60237 982 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms