RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 ZNF521Q96K83 1311 aa27.52■■■□□ 2
FNDC3B-204ENST00000421757 DDX58O95786 925 aaKnown RBP27.52■■■□□ 2
FNDC3B-204ENST00000421757 ZNF428Q96B54 188 aa27.52■■■□□ 2
FNDC3B-204ENST00000421757 TRMT112Q9UI30 125 aaKnown RBP27.52■■■□□ 2
FNDC3B-204ENST00000421757 ATP5J2-PTCD1G3V325 749 aa27.51■■□□□ 1.99
FNDC3B-204ENST00000421757 C21orf2O43822 256 aa27.51■■□□□ 1.99
FNDC3B-204ENST00000421757 PRPF40BQ6NWY9 871 aaKnown RBP27.51■■□□□ 1.99
FNDC3B-204ENST00000421757 ANKRD36CQ5JPF3 1778 aa27.5■■□□□ 1.99
FNDC3B-204ENST00000421757 SLC4A2P04920 1241 aa27.5■■□□□ 1.99
FNDC3B-204ENST00000421757 VAMP4O75379 141 aa27.49■■□□□ 1.99
FNDC3B-204ENST00000421757 RPGRQ92834 1020 aaKnown RBP27.49■■□□□ 1.99
FNDC3B-204ENST00000421757 RNF123Q5XPI4 1314 aa27.48■■□□□ 1.99
FNDC3B-204ENST00000421757 ALDH1B1P30837 517 aa27.48■■□□□ 1.99
FNDC3B-204ENST00000421757 NLRP3Q96P20 1036 aa27.48■■□□□ 1.99
FNDC3B-204ENST00000421757 MYD88Q99836 296 aa27.48■■□□□ 1.99
FNDC3B-204ENST00000421757 ISCA1Q9BUE6 129 aa27.48■■□□□ 1.99
FNDC3B-204ENST00000421757 TNRC6CQ9HCJ0 1690 aaKnown RBP27.47■■□□□ 1.99
FNDC3B-204ENST00000421757 RASSF7Q02833 373 aa27.47■■□□□ 1.99
FNDC3B-204ENST00000421757 RIC1Q4ADV7 1423 aa27.47■■□□□ 1.99
FNDC3B-204ENST00000421757 SH3TC1Q8TE82 1336 aa27.46■■□□□ 1.99
FNDC3B-204ENST00000421757 CRY2Q49AN0 593 aa27.46■■□□□ 1.99
FNDC3B-204ENST00000421757 C9orf131Q5VYM1 1079 aa27.46■■□□□ 1.99
FNDC3B-204ENST00000421757 ARFGEF2Q9Y6D5 1785 aa27.45■■□□□ 1.99
FNDC3B-204ENST00000421757 E9PSI1 815 aa27.45■■□□□ 1.98
FNDC3B-204ENST00000421757 HCLS1P14317 486 aaPredicted RBP27.45■■□□□ 1.98
FNDC3B-204ENST00000421757 SLC10A5Q5PT55 438 aa27.45■■□□□ 1.98
FNDC3B-204ENST00000421757 G2E3Q7L622 706 aa27.45■■□□□ 1.98
FNDC3B-204ENST00000421757 SYNE4Q8N205 404 aa27.45■■□□□ 1.98
FNDC3B-204ENST00000421757 MAP3K2Q9Y2U5 619 aa27.45■■□□□ 1.98
FNDC3B-204ENST00000421757 PI4KAP2A4QPH2 592 aa27.44■■□□□ 1.98
FNDC3B-204ENST00000421757 SOGA3Q5TF21 947 aa27.44■■□□□ 1.98
FNDC3B-204ENST00000421757 KSR2Q6VAB6 950 aa27.44■■□□□ 1.98
FNDC3B-204ENST00000421757 PI4KAP1Q8N8J0 262 aa27.44■■□□□ 1.98
FNDC3B-204ENST00000421757 RNF181Q9P0P0 153 aa27.44■■□□□ 1.98
FNDC3B-204ENST00000421757 CACNA1SQ13698 1873 aa27.43■■□□□ 1.98
FNDC3B-204ENST00000421757 TRIM28Q13263 835 aaKnown RBP27.43■■□□□ 1.98
FNDC3B-204ENST00000421757 C3orf67Q6ZVT6 689 aa27.43■■□□□ 1.98
FNDC3B-204ENST00000421757 FAM89AQ96GI7 184 aa27.43■■□□□ 1.98
FNDC3B-204ENST00000421757 RBM17Q96I25 401 aaKnown RBP27.43■■□□□ 1.98
FNDC3B-204ENST00000421757 METTL22Q9BUU2 404 aaPredicted RBP27.43■■□□□ 1.98
FNDC3B-204ENST00000421757 ADCY9O60503 1353 aa27.43■■□□□ 1.98
FNDC3B-204ENST00000421757 SLX4Q8IY92 1834 aa27.43■■□□□ 1.98
FNDC3B-204ENST00000421757 FLIIQ13045 1269 aa27.42■■□□□ 1.98
FNDC3B-204ENST00000421757 RTL5Q5HYW3 569 aaPredicted RBP27.42■■□□□ 1.98
FNDC3B-204ENST00000421757 ZNF526Q8TF50 670 aaPredicted RBP27.42■■□□□ 1.98
FNDC3B-204ENST00000421757 NFKBIEO00221 500 aa27.4■■□□□ 1.98
FNDC3B-204ENST00000421757 LMNB1P20700 586 aa27.4■■□□□ 1.98
FNDC3B-204ENST00000421757 HOXA10P31260 410 aaPredicted RBP27.4■■□□□ 1.98
FNDC3B-204ENST00000421757 NEXNQ0ZGT2 675 aa27.4■■□□□ 1.98
FNDC3B-204ENST00000421757 FKBP5Q13451 457 aaPredicted RBP27.4■■□□□ 1.98
FNDC3B-204ENST00000421757 SLFN5Q08AF3 891 aa27.39■■□□□ 1.98
FNDC3B-204ENST00000421757 CCDC93Q567U6 631 aa27.39■■□□□ 1.98
FNDC3B-204ENST00000421757 CCDC191Q8NCU4 936 aa27.39■■□□□ 1.98
FNDC3B-204ENST00000421757 CWC25Q9NXE8 425 aaPredicted RBP27.39■■□□□ 1.98
FNDC3B-204ENST00000421757 C7orf43Q8WVR3 580 aa27.38■■□□□ 1.97
FNDC3B-204ENST00000421757 CDCA7LQ96GN5 454 aa27.38■■□□□ 1.97
FNDC3B-204ENST00000421757 CRAMP1Q96RY5 1269 aa27.38■■□□□ 1.97
FNDC3B-204ENST00000421757 TAOK3Q9H2K8 898 aa27.38■■□□□ 1.97
FNDC3B-204ENST00000421757 GPBP1L1Q9HC44 474 aaPredicted RBP27.38■■□□□ 1.97
FNDC3B-204ENST00000421757 ZBTB38Q8NAP3 1195 aaPredicted RBP27.37■■□□□ 1.97
FNDC3B-204ENST00000421757 IRS4O14654 1257 aaPredicted RBP27.36■■□□□ 1.97
FNDC3B-204ENST00000421757 OLFM4Q6UX06 510 aa27.36■■□□□ 1.97
FNDC3B-204ENST00000421757 PRELPP51888 382 aa27.35■■□□□ 1.97
FNDC3B-204ENST00000421757 DDX46Q7L014 1031 aaKnown RBP27.35■■□□□ 1.97
FNDC3B-204ENST00000421757 PPEF1O14829 653 aaPredicted RBP27.34■■□□□ 1.97
FNDC3B-204ENST00000421757 RTKN2Q8IZC4 609 aa27.34■■□□□ 1.97
FNDC3B-204ENST00000421757 IGKV5-2P06315 115 aa27.33■■□□□ 1.97
FNDC3B-204ENST00000421757 HSP90B1P14625 803 aaKnown RBP27.33■■□□□ 1.97
FNDC3B-204ENST00000421757 DNAAF4Q8WXU2 420 aa27.33■■□□□ 1.97
FNDC3B-204ENST00000421757 JARID2Q92833 1246 aaPredicted RBP27.33■■□□□ 1.97
FNDC3B-204ENST00000421757 TMX4Q9H1E5 349 aaPredicted RBP27.33■■□□□ 1.97
FNDC3B-204ENST00000421757 ABCC4O15439 1325 aa27.33■■□□□ 1.97
FNDC3B-204ENST00000421757 LTBP3Q9NS15 1303 aa27.33■■□□□ 1.97
FNDC3B-204ENST00000421757 SBF1O95248 1867 aa27.32■■□□□ 1.96
FNDC3B-204ENST00000421757 PCCAP05165 728 aaPredicted RBP27.32■■□□□ 1.96
FNDC3B-204ENST00000421757 CWF19L2Q2TBE0 894 aaKnown RBP27.32■■□□□ 1.96
FNDC3B-204ENST00000421757 FER1L6Q2WGJ9 1857 aa27.32■■□□□ 1.96
FNDC3B-204ENST00000421757 CACNA1FO60840 1977 aa27.3■■□□□ 1.96
FNDC3B-204ENST00000421757 NEURL1BA8MQ27 555 aa27.3■■□□□ 1.96
FNDC3B-204ENST00000421757 FKBP4Q02790 459 aaKnown RBP eCLIP27.3■■□□□ 1.967e-13■■□□□ 11.6
FNDC3B-204ENST00000421757 CC2D2BQ6DHV5 1058 aa27.3■■□□□ 1.96
FNDC3B-204ENST00000421757 SF3B3Q15393 1217 aaKnown RBP27.29■■□□□ 1.96
FNDC3B-204ENST00000421757 DDX60Q8IY21 1712 aaKnown RBP27.29■■□□□ 1.96
FNDC3B-204ENST00000421757 LAMB2P55268 1798 aa27.29■■□□□ 1.96
FNDC3B-204ENST00000421757 ZC3H4Q9UPT8 1303 aaKnown RBP27.28■■□□□ 1.96
FNDC3B-204ENST00000421757 F6X3S4 739 aa27.28■■□□□ 1.96
FNDC3B-204ENST00000421757 BBOX1O75936 387 aa27.28■■□□□ 1.96
FNDC3B-204ENST00000421757 HNRNPUQ00839 825 aaKnown RBP eCLIP27.28■■□□□ 1.962e-7■□□□□ 9.9
FNDC3B-204ENST00000421757 GRAPQ13588 217 aa27.28■■□□□ 1.96
FNDC3B-204ENST00000421757 GRAPLQ8TC17 118 aaPredicted RBP27.28■■□□□ 1.96
FNDC3B-204ENST00000421757 TRMT2AQ8IZ69 625 aaKnown RBP27.27■■□□□ 1.96
FNDC3B-204ENST00000421757 ZNF277Q9NRM2 450 aaPredicted RBP27.27■■□□□ 1.96
FNDC3B-204ENST00000421757 PDE8AO60658 829 aa27.26■■□□□ 1.95
FNDC3B-204ENST00000421757 GRIPAP1Q4V328 841 aa27.26■■□□□ 1.95
FNDC3B-204ENST00000421757 LINS1Q8NG48 757 aa27.26■■□□□ 1.95
FNDC3B-204ENST00000421757 ATP6V0A2Q9Y487 856 aa27.26■■□□□ 1.95
FNDC3B-204ENST00000421757 CCDC88AQ3V6T2 1871 aa27.25■■□□□ 1.95
FNDC3B-204ENST00000421757 KDM2BQ8NHM5 1336 aa27.25■■□□□ 1.95
FNDC3B-204ENST00000421757 SLC51AQ86UW1 340 aa27.25■■□□□ 1.95
FNDC3B-204ENST00000421757 CDHR2Q9BYE9 1310 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms