RNA–Protein interactions for RNA: ENST00000421359.5

TTC38-203, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 4

Gene TTC38, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-203ENST00000421359 HOXB7P09629 217 aa20.35■□□□□ 0.85
TTC38-203ENST00000421359 HOXA10P31260 410 aaPredicted RBP20.35■□□□□ 0.85
TTC38-203ENST00000421359 EIF6P56537 245 aaKnown RBP20.35■□□□□ 0.85
TTC38-203ENST00000421359 SUSD4Q5VX71 490 aa20.35■□□□□ 0.85
TTC38-203ENST00000421359 CCDC146Q8IYE0 955 aa20.35■□□□□ 0.85
TTC38-203ENST00000421359 SYNE4Q8N205 404 aa20.35■□□□□ 0.85
TTC38-203ENST00000421359 ZNF277Q9NRM2 450 aaPredicted RBP20.35■□□□□ 0.85
TTC38-203ENST00000421359 L3MBTL3Q96JM7 780 aaPredicted RBP20.34■□□□□ 0.85
TTC38-203ENST00000421359 DDX21Q9NR30 783 aaKnown RBP eCLIP20.34■□□□□ 0.85
TTC38-203ENST00000421359 PNMA8AQ86V59 439 aaPredicted RBP20.33■□□□□ 0.85
TTC38-203ENST00000421359 LDHDQ86WU2 507 aa20.33■□□□□ 0.85
TTC38-203ENST00000421359 HACL1Q9UJ83 578 aa20.33■□□□□ 0.85
TTC38-203ENST00000421359 CHL1O00533 1208 aa20.32■□□□□ 0.84
TTC38-203ENST00000421359 PPEF1O14829 653 aaPredicted RBP20.32■□□□□ 0.84
TTC38-203ENST00000421359 NTSR2O95665 410 aa20.32■□□□□ 0.84
TTC38-203ENST00000421359 AIMP1Q12904 312 aaKnown RBP20.32■□□□□ 0.84
TTC38-203ENST00000421359 COPS6Q7L5N1 327 aa20.32■□□□□ 0.84
TTC38-203ENST00000421359 SUPT20HQ8NEM7 779 aa20.32■□□□□ 0.84
TTC38-203ENST00000421359 VPS33BQ9H267 617 aa20.32■□□□□ 0.84
TTC38-203ENST00000421359 SCN4AP35499 1836 aa20.32■□□□□ 0.84
TTC38-203ENST00000421359 UBN2Q6ZU65 1347 aa20.31■□□□□ 0.84
TTC38-203ENST00000421359 LMOD1P29536 600 aaPredicted RBP20.31■□□□□ 0.84
TTC38-203ENST00000421359 HDGFL1Q5TGJ6 251 aa20.31■□□□□ 0.84
TTC38-203ENST00000421359 GPC2Q8N158 579 aa20.31■□□□□ 0.84
TTC38-203ENST00000421359 JMYQ8N9B5 988 aa20.31■□□□□ 0.84
TTC38-203ENST00000421359 DBF4Q9UBU7 674 aaPredicted RBP20.31■□□□□ 0.84
TTC38-203ENST00000421359 ADAMTS8Q9UP79 889 aa20.31■□□□□ 0.84
TTC38-203ENST00000421359 ABCC12Q96J65 1359 aa20.31■□□□□ 0.84
TTC38-203ENST00000421359 POTECB2RU33 542 aa20.3■□□□□ 0.84
TTC38-203ENST00000421359 HSP90B1P14625 803 aaKnown RBP20.3■□□□□ 0.84
TTC38-203ENST00000421359 SLC10A5Q5PT55 438 aa20.3■□□□□ 0.84
TTC38-203ENST00000421359 LARGE2Q8N3Y3 721 aa20.3■□□□□ 0.84
TTC38-203ENST00000421359 NECTIN2Q92692 538 aa20.3■□□□□ 0.84
TTC38-203ENST00000421359 CFAP44Q96MT7 982 aa20.3■□□□□ 0.84
TTC38-203ENST00000421359 PRKRIP1Q9H875 184 aaPredicted RBP20.3■□□□□ 0.84
TTC38-203ENST00000421359 CLEC11AQ9Y240 323 aa20.3■□□□□ 0.84
TTC38-203ENST00000421359 BBOX1O75936 387 aa20.29■□□□□ 0.84
TTC38-203ENST00000421359 TCIRG1Q13488 830 aa20.29■□□□□ 0.84
TTC38-203ENST00000421359 PDIA6Q15084 440 aa20.29■□□□□ 0.84
TTC38-203ENST00000421359 DDX46Q7L014 1031 aaKnown RBP20.29■□□□□ 0.84
TTC38-203ENST00000421359 XAGE3Q8WTP9 111 aa20.29■□□□□ 0.84
TTC38-203ENST00000421359 TAF1DQ9H5J8 278 aaPredicted RBP20.29■□□□□ 0.84
TTC38-203ENST00000421359 HYPKQ9NX55 129 aa20.29■□□□□ 0.84
TTC38-203ENST00000421359 TRMT112Q9UI30 125 aaKnown RBP20.29■□□□□ 0.84
TTC38-203ENST00000421359 FZD9O00144 591 aa20.28■□□□□ 0.84
TTC38-203ENST00000421359 EAPPQ56P03 285 aaPredicted RBP20.28■□□□□ 0.84
TTC38-203ENST00000421359 TMC4Q7Z404 712 aa20.28■□□□□ 0.84
TTC38-203ENST00000421359 NIM1KQ8IY84 436 aa20.28■□□□□ 0.84
TTC38-203ENST00000421359 CREBZFQ9NS37 354 aa20.28■□□□□ 0.84
TTC38-203ENST00000421359 SH3TC1Q8TE82 1336 aa20.27■□□□□ 0.84
TTC38-203ENST00000421359 GNAI1P63096 354 aa20.27■□□□□ 0.84
TTC38-203ENST00000421359 HTRA3P83110 453 aa20.27■□□□□ 0.84
TTC38-203ENST00000421359 EPHX2P34913 555 aa20.26■□□□□ 0.83
TTC38-203ENST00000421359 ANKRD13DQ6ZTN6 518 aa20.26■□□□□ 0.83
TTC38-203ENST00000421359 NLRP10Q86W26 655 aa20.26■□□□□ 0.83
TTC38-203ENST00000421359 PLBD2Q8NHP8 589 aa20.26■□□□□ 0.83
TTC38-203ENST00000421359 TRIM35Q9UPQ4 493 aa20.26■□□□□ 0.83
TTC38-203ENST00000421359 ATP6V0A2Q9Y487 856 aa20.26■□□□□ 0.83
TTC38-203ENST00000421359 ANXA1P04083 346 aa20.25■□□□□ 0.83
TTC38-203ENST00000421359 PROSER3Q2NL68 480 aa20.25■□□□□ 0.83
TTC38-203ENST00000421359 OLFM4Q6UX06 510 aa20.25■□□□□ 0.83
TTC38-203ENST00000421359 LRP10Q7Z4F1 713 aa20.25■□□□□ 0.83
TTC38-203ENST00000421359 CHPF2Q9P2E5 772 aa20.25■□□□□ 0.83
TTC38-203ENST00000421359 TCERG1O14776 1098 aaKnown RBP20.24■□□□□ 0.83
TTC38-203ENST00000421359 PPIP5K2O43314 1243 aa20.24■□□□□ 0.83
TTC38-203ENST00000421359 IFT57Q9NWB7 429 aa20.24■□□□□ 0.83
TTC38-203ENST00000421359 GJA3Q9Y6H8 435 aa20.24■□□□□ 0.83
TTC38-203ENST00000421359 ZNF541Q9H0D2 1346 aa20.24■□□□□ 0.83
TTC38-203ENST00000421359 ZEB1P37275 1124 aaPredicted RBP20.23■□□□□ 0.83
TTC38-203ENST00000421359 GOLGA2Q08379 1002 aa20.23■□□□□ 0.83
TTC38-203ENST00000421359 DUSP27Q5VZP5 1158 aa20.23■□□□□ 0.83
TTC38-203ENST00000421359 DPP8Q6V1X1 898 aaPredicted RBP20.23■□□□□ 0.83
TTC38-203ENST00000421359 SP8Q8IXZ3 490 aa20.23■□□□□ 0.83
TTC38-203ENST00000421359 ANKRD36CQ5JPF3 1778 aa20.23■□□□□ 0.83
TTC38-203ENST00000421359 MPNDQ8N594 471 aa20.22■□□□□ 0.83
TTC38-203ENST00000421359 GRAPQ13588 217 aa20.21■□□□□ 0.83
TTC38-203ENST00000421359 GRAPLQ8TC17 118 aaPredicted RBP20.21■□□□□ 0.83
TTC38-203ENST00000421359 ABCC4O15439 1325 aa20.21■□□□□ 0.83
TTC38-203ENST00000421359 TMEM88BA6NKF7 163 aa20.2■□□□□ 0.82
TTC38-203ENST00000421359 DDX58O95786 925 aaKnown RBP20.2■□□□□ 0.82
TTC38-203ENST00000421359 RIC3Q7Z5B4 369 aa20.2■□□□□ 0.82
TTC38-203ENST00000421359 APAF1O14727 1248 aa20.19■□□□□ 0.82
TTC38-203ENST00000421359 HCLS1P14317 486 aaPredicted RBP20.19■□□□□ 0.82
TTC38-203ENST00000421359 MBIPQ9NS73 344 aa20.19■□□□□ 0.82
TTC38-203ENST00000421359 ZNRF3Q9ULT6 936 aa20.19■□□□□ 0.82
TTC38-203ENST00000421359 TNIP1Q15025 636 aa20.18■□□□□ 0.82
TTC38-203ENST00000421359 USP50Q70EL3 339 aaPredicted RBP20.18■□□□□ 0.82
TTC38-203ENST00000421359 CNTROBQ8N137 903 aa20.18■□□□□ 0.82
TTC38-203ENST00000421359 RTFDC1Q9BY42 306 aaPredicted RBP20.18■□□□□ 0.82
TTC38-203ENST00000421359 POTEIP0CG38 1075 aa20.17■□□□□ 0.82
TTC38-203ENST00000421359 POTEJP0CG39 1038 aa20.17■□□□□ 0.82
TTC38-203ENST00000421359 TRIM28Q13263 835 aaKnown RBP20.17■□□□□ 0.82
TTC38-203ENST00000421359 KRT24Q2M2I5 525 aa20.17■□□□□ 0.82
TTC38-203ENST00000421359 CCDC30Q5VVM6 783 aa20.17■□□□□ 0.82
TTC38-203ENST00000421359 SNED1Q8TER0 1413 aa20.17■□□□□ 0.82
TTC38-203ENST00000421359 AOC3Q16853 763 aa20.16■□□□□ 0.82
TTC38-203ENST00000421359 C3orf67Q6ZVT6 689 aa20.16■□□□□ 0.82
TTC38-203ENST00000421359 ISCA1Q9BUE6 129 aa20.16■□□□□ 0.82
TTC38-203ENST00000421359 PASKQ96RG2 1323 aa20.16■□□□□ 0.82
TTC38-203ENST00000421359 CDHR2Q9BYE9 1310 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms