RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 MED14O60244 1454 aa17.28■□□□□ 0.36
AP000550.1-201ENST00000420508 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
AP000550.1-201ENST00000420508 CHMLP26374 656 aa17.28■□□□□ 0.36
AP000550.1-201ENST00000420508 CCDC43Q96MW1 224 aaKnown RBP17.28■□□□□ 0.36
AP000550.1-201ENST00000420508 SLF2Q8IX21 1173 aa17.27■□□□□ 0.36
AP000550.1-201ENST00000420508 NUP133Q8WUM0 1156 aa17.27■□□□□ 0.36
AP000550.1-201ENST00000420508 PCDH11XQ9BZA7 1347 aa17.27■□□□□ 0.36
AP000550.1-201ENST00000420508 PCDH11YQ9BZA8 1340 aa17.27■□□□□ 0.36
AP000550.1-201ENST00000420508 CDR1P51861 262 aa17.27■□□□□ 0.35
AP000550.1-201ENST00000420508 ATL3Q6DD88 541 aa17.27■□□□□ 0.35
AP000550.1-201ENST00000420508 COPS6Q7L5N1 327 aa17.27■□□□□ 0.35
AP000550.1-201ENST00000420508 AK7Q96M32 723 aa17.27■□□□□ 0.35
AP000550.1-201ENST00000420508 IQCA1Q86XH1 822 aa17.27■□□□□ 0.35
AP000550.1-201ENST00000420508 GSDMDP57764 484 aa17.26■□□□□ 0.35
AP000550.1-201ENST00000420508 RBM8AQ9Y5S9 174 aaKnown RBP17.26■□□□□ 0.35
AP000550.1-201ENST00000420508 EPS15P42566 896 aa17.26■□□□□ 0.35
AP000550.1-201ENST00000420508 STX1AQ16623 288 aa17.26■□□□□ 0.35
AP000550.1-201ENST00000420508 HSP90B2PQ58FF3 399 aa17.26■□□□□ 0.35
AP000550.1-201ENST00000420508 TMTC2Q8N394 836 aa17.26■□□□□ 0.35
AP000550.1-201ENST00000420508 DDX11Q96FC9 970 aa17.26■□□□□ 0.35
AP000550.1-201ENST00000420508 ARID3AQ99856 593 aa17.26■□□□□ 0.35
AP000550.1-201ENST00000420508 CCAR1Q8IX12 1150 aaKnown RBP17.26■□□□□ 0.35
AP000550.1-201ENST00000420508 SLC12A7Q9Y666 1083 aa17.26■□□□□ 0.35
AP000550.1-201ENST00000420508 ZSCAN23Q3MJ62 389 aa17.26■□□□□ 0.35
AP000550.1-201ENST00000420508 SPC24Q8NBT2 197 aa17.26■□□□□ 0.35
AP000550.1-201ENST00000420508 GOLIM4O00461 696 aa17.25■□□□□ 0.35
AP000550.1-201ENST00000420508 CNNM2Q9H8M5 875 aa17.25■□□□□ 0.35
AP000550.1-201ENST00000420508 CFAP65Q6ZU64 1925 aaKnown RBP17.25■□□□□ 0.35
AP000550.1-201ENST00000420508 SSRP1Q08945 709 aaKnown RBP17.25■□□□□ 0.35
AP000550.1-201ENST00000420508 CCDC178Q5BJE1 867 aa17.25■□□□□ 0.35
AP000550.1-201ENST00000420508 KANK3Q6NY19 840 aa17.25■□□□□ 0.35
AP000550.1-201ENST00000420508 LDHAL6AQ6ZMR3 332 aa17.25■□□□□ 0.35
AP000550.1-201ENST00000420508 BMP15O95972 392 aa17.25■□□□□ 0.35
AP000550.1-201ENST00000420508 KIAA1210Q9ULL0 1709 aa17.25■□□□□ 0.35
AP000550.1-201ENST00000420508 RRP9O43818 475 aaKnown RBP17.24■□□□□ 0.35
AP000550.1-201ENST00000420508 GOLGA8BA8MQT2 603 aa17.24■□□□□ 0.35
AP000550.1-201ENST00000420508 RAD21O60216 631 aa17.24■□□□□ 0.35
AP000550.1-201ENST00000420508 ATP2B1P20020 1258 aa17.24■□□□□ 0.35
AP000550.1-201ENST00000420508 CTCFLQ8NI51 663 aaPredicted RBP17.24■□□□□ 0.35
AP000550.1-201ENST00000420508 SMARCC1Q92922 1105 aaPredicted RBP17.24■□□□□ 0.35
AP000550.1-201ENST00000420508 FERMT3Q86UX7 667 aa17.24■□□□□ 0.35
AP000550.1-201ENST00000420508 IL2RBP14784 551 aa17.23■□□□□ 0.35
AP000550.1-201ENST00000420508 KRT23Q9C075 422 aa17.23■□□□□ 0.35
AP000550.1-201ENST00000420508 ZBTB3Q9H5J0 574 aa17.23■□□□□ 0.35
AP000550.1-201ENST00000420508 SPTY2D1Q68D10 685 aaPredicted RBP17.23■□□□□ 0.35
AP000550.1-201ENST00000420508 E9PCH4 1651 aa17.23■□□□□ 0.35
AP000550.1-201ENST00000420508 F13A1P00488 732 aa17.23■□□□□ 0.35
AP000550.1-201ENST00000420508 GLI2P10070 1586 aa17.23■□□□□ 0.35
AP000550.1-201ENST00000420508 GOLGA8AA7E2F4 631 aa17.23■□□□□ 0.35
AP000550.1-201ENST00000420508 ZPR1O75312 459 aa17.23■□□□□ 0.35
AP000550.1-201ENST00000420508 MYO6Q9UM54 1294 aa17.23■□□□□ 0.35
AP000550.1-201ENST00000420508 ZSCAN12O43309 604 aa17.22■□□□□ 0.35
AP000550.1-201ENST00000420508 CCDC152Q4G0S7 254 aa17.22■□□□□ 0.35
AP000550.1-201ENST00000420508 ZNF771Q7L3S4 317 aaPredicted RBP17.22■□□□□ 0.35
AP000550.1-201ENST00000420508 BMP2KQ9NSY1 1161 aaPredicted RBP17.22■□□□□ 0.35
AP000550.1-201ENST00000420508 ERCC6L2Q5T890 1561 aa17.22■□□□□ 0.35
AP000550.1-201ENST00000420508 LDHCP07864 332 aa17.22■□□□□ 0.35
AP000550.1-201ENST00000420508 CEP152O94986 1710 aa17.22■□□□□ 0.35
AP000550.1-201ENST00000420508 OFD1O75665 1012 aa17.22■□□□□ 0.35
AP000550.1-201ENST00000420508 RUFY1Q96T51 708 aa17.22■□□□□ 0.35
AP000550.1-201ENST00000420508 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.22■□□□□ 0.35
AP000550.1-201ENST00000420508 KCNG4Q8TDN1 519 aa17.22■□□□□ 0.35
AP000550.1-201ENST00000420508 HELLSQ9NRZ9 838 aa17.21■□□□□ 0.35
AP000550.1-201ENST00000420508 CPSF1Q10570 1443 aaKnown RBP17.21■□□□□ 0.35
AP000550.1-201ENST00000420508 GNAT2P19087 354 aa17.21■□□□□ 0.35
AP000550.1-201ENST00000420508 SFPQP23246 707 aaKnown RBP eCLIP17.21■□□□□ 0.35
AP000550.1-201ENST00000420508 CDCA7Q9BWT1 371 aaPredicted RBP17.21■□□□□ 0.35
AP000550.1-201ENST00000420508 IARSP41252 1262 aaKnown RBP17.21■□□□□ 0.34
AP000550.1-201ENST00000420508 TNNT3P45378 269 aaPredicted RBP17.21■□□□□ 0.34
AP000550.1-201ENST00000420508 CATIPQ7Z7H3 387 aa17.21■□□□□ 0.34
AP000550.1-201ENST00000420508 C16orf71Q8IYS4 520 aaPredicted RBP17.21■□□□□ 0.34
AP000550.1-201ENST00000420508 INO80Q9ULG1 1556 aaPredicted RBP17.21■□□□□ 0.34
AP000550.1-201ENST00000420508 IFIT3O14879 490 aaKnown RBP17.2■□□□□ 0.34
AP000550.1-201ENST00000420508 IQCEQ6IPM2 695 aa17.2■□□□□ 0.34
AP000550.1-201ENST00000420508 METTL22Q9BUU2 404 aaPredicted RBP17.2■□□□□ 0.34
AP000550.1-201ENST00000420508 UQCRHLA0A096LP55 91 aa17.2■□□□□ 0.34
AP000550.1-201ENST00000420508 UQCRHP07919 91 aa17.2■□□□□ 0.34
AP000550.1-201ENST00000420508 ATP2B3Q16720 1220 aa17.2■□□□□ 0.34
AP000550.1-201ENST00000420508 PLBD2Q8NHP8 589 aa17.2■□□□□ 0.34
AP000550.1-201ENST00000420508 USP16Q9Y5T5 823 aa17.2■□□□□ 0.34
AP000550.1-201ENST00000420508 ANKARQ7Z5J8 1434 aa17.2■□□□□ 0.34
AP000550.1-201ENST00000420508 ATP5J2-PTCD1G3V325 749 aa17.2■□□□□ 0.34
AP000550.1-201ENST00000420508 KIF5BP33176 963 aa17.2■□□□□ 0.34
AP000550.1-201ENST00000420508 CCDC12Q8WUD4 166 aaPredicted RBP17.2■□□□□ 0.34
AP000550.1-201ENST00000420508 ERBB4Q15303 1308 aa17.2■□□□□ 0.34
AP000550.1-201ENST00000420508 USP6P35125 1406 aa17.2■□□□□ 0.34
AP000550.1-201ENST00000420508 LMBR1LQ6UX01 489 aa17.19■□□□□ 0.34
AP000550.1-201ENST00000420508 NEURL4Q96JN8 1562 aa17.19■□□□□ 0.34
AP000550.1-201ENST00000420508 ABCA6Q8N139 1617 aa17.19■□□□□ 0.34
AP000550.1-201ENST00000420508 ERLIN1O75477 346 aa17.19■□□□□ 0.34
AP000550.1-201ENST00000420508 TUBB4AP04350 444 aa17.19■□□□□ 0.34
AP000550.1-201ENST00000420508 FSIP1Q8NA03 581 aa17.19■□□□□ 0.34
AP000550.1-201ENST00000420508 ABCF2Q9UG63 623 aa17.19■□□□□ 0.34
AP000550.1-201ENST00000420508 CCDC171Q6TFL3 1326 aa17.19■□□□□ 0.34
AP000550.1-201ENST00000420508 SEC24BO95487 1268 aa17.19■□□□□ 0.34
AP000550.1-201ENST00000420508 RUFY3Q7L099 469 aa17.19■□□□□ 0.34
AP000550.1-201ENST00000420508 PAG1Q9NWQ8 432 aa17.19■□□□□ 0.34
AP000550.1-201ENST00000420508 ORC3Q9UBD5 711 aaPredicted RBP17.19■□□□□ 0.34
AP000550.1-201ENST00000420508 GOLGA6L9A6NEM1 432 aa17.19■□□□□ 0.34
AP000550.1-201ENST00000420508 NMIQ13287 307 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms