RNA–Protein interactions for RNA: ENST00000420115.6

CDV3-202, Transcript of CDV3 homolog, humanhuman

TSL 2 BASIC

Gene CDV3, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-202ENST00000420115 CCDC9Q9Y3X0 531 aaKnown RBP11.91□□□□□ -0.5
CDV3-202ENST00000420115 RIMBP3CA6NJZ7 1639 aa11.91□□□□□ -0.5
CDV3-202ENST00000420115 RIMBP3BA6NNM3 1639 aa11.91□□□□□ -0.5
CDV3-202ENST00000420115 RIMBP3Q9UFD9 1639 aa11.91□□□□□ -0.5
CDV3-202ENST00000420115 VPS37CA5D8V6 355 aaPredicted RBP11.91□□□□□ -0.5
CDV3-202ENST00000420115 CPA1P15085 419 aa11.91□□□□□ -0.5
CDV3-202ENST00000420115 KMT5BQ4FZB7 885 aa11.91□□□□□ -0.5
CDV3-202ENST00000420115 CCDC191Q8NCU4 936 aa11.91□□□□□ -0.5
CDV3-202ENST00000420115 SH2B1Q9NRF2 756 aaPredicted RBP11.91□□□□□ -0.5
CDV3-202ENST00000420115 XRN1Q8IZH2 1706 aaKnown RBP11.91□□□□□ -0.5
CDV3-202ENST00000420115 DRC7Q8IY82 874 aa11.91□□□□□ -0.5
CDV3-202ENST00000420115 CNTROBQ8N137 903 aa11.91□□□□□ -0.5
CDV3-202ENST00000420115 ZSCAN31Q96LW9 406 aaPredicted RBP11.91□□□□□ -0.5
CDV3-202ENST00000420115 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 RAB11FIP3O75154 756 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 CASQ1P31415 396 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 VPS53Q5VIR6 699 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 ZSCAN25Q6NSZ9 544 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 TTC6Q86TZ1 520 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 CCDC112Q8NEF3 446 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 SSH3Q8TE77 659 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 SUFUQ9UMX1 484 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 JRKLQ9Y4A0 524 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 CCDC61Q9Y6R9 512 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 ELP1O95163 1332 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 GUCY2CP25092 1073 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 KRT85P78386 507 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 PPP2R5AQ15172 486 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 CAMK4Q16566 473 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 TTLL5Q6EMB2 1281 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.9□□□□□ -0.5
CDV3-202ENST00000420115 CBX8Q9HC52 389 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 NRBP1Q9UHY1 535 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 STAG3Q9UJ98 1225 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
CDV3-202ENST00000420115 LIG1P18858 919 aa11.9□□□□□ -0.51
CDV3-202ENST00000420115 CWC27Q6UX04 472 aaKnown RBP11.9□□□□□ -0.51
CDV3-202ENST00000420115 PLA2G4DQ86XP0 818 aa11.9□□□□□ -0.51
CDV3-202ENST00000420115 SLC26A8Q96RN1 970 aa11.9□□□□□ -0.51
CDV3-202ENST00000420115 PDRG1Q9NUG6 133 aa11.9□□□□□ -0.51
CDV3-202ENST00000420115 ZNF75DP51815 510 aa11.89□□□□□ -0.51
CDV3-202ENST00000420115 ANO6Q4KMQ2 910 aa11.89□□□□□ -0.51
CDV3-202ENST00000420115 PLCD4Q9BRC7 762 aa11.89□□□□□ -0.51
CDV3-202ENST00000420115 TRIM5Q9C035 493 aa11.89□□□□□ -0.51
CDV3-202ENST00000420115 USP44Q9H0E7 712 aa11.89□□□□□ -0.51
CDV3-202ENST00000420115 CHMP3Q9Y3E7 222 aa11.89□□□□□ -0.51
CDV3-202ENST00000420115 RGPD1P0DJD0 1748 aa11.89□□□□□ -0.51
CDV3-202ENST00000420115 FOXO3O43524 673 aa11.89□□□□□ -0.51
CDV3-202ENST00000420115 DTNBO60941 627 aa11.89□□□□□ -0.51
CDV3-202ENST00000420115 UBTFL1P0CB47 393 aaPredicted RBP11.89□□□□□ -0.51
CDV3-202ENST00000420115 CYP2C19P33261 490 aa11.89□□□□□ -0.51
CDV3-202ENST00000420115 CCDC30Q5VVM6 783 aa11.89□□□□□ -0.51
CDV3-202ENST00000420115 TNMDQ9H2S6 317 aa11.89□□□□□ -0.51
CDV3-202ENST00000420115 AKAP12Q02952 1782 aa11.89□□□□□ -0.51
CDV3-202ENST00000420115 SATB1Q01826 763 aa11.88□□□□□ -0.51
CDV3-202ENST00000420115 HSP90AB2PQ58FF8 381 aa11.88□□□□□ -0.51
CDV3-202ENST00000420115 RHPN1Q8TCX5 695 aa11.88□□□□□ -0.51
CDV3-202ENST00000420115 SURF6O75683 361 aaKnown RBP11.88□□□□□ -0.51
CDV3-202ENST00000420115 ST3GAL1Q11201 340 aa11.88□□□□□ -0.51
CDV3-202ENST00000420115 BIRC2Q13490 618 aa11.88□□□□□ -0.51
CDV3-202ENST00000420115 FBXO31Q5XUX0 539 aaPredicted RBP11.88□□□□□ -0.51
CDV3-202ENST00000420115 CKAP2LQ8IYA6 745 aa11.88□□□□□ -0.51
CDV3-202ENST00000420115 JAKMIP1Q96N16 626 aaKnown RBP11.88□□□□□ -0.51
CDV3-202ENST00000420115 CYP46A1Q9Y6A2 500 aa11.88□□□□□ -0.51
CDV3-202ENST00000420115 SETD1AO15047 1707 aaKnown RBP11.88□□□□□ -0.51
CDV3-202ENST00000420115 CCDC171Q6TFL3 1326 aa11.88□□□□□ -0.51
CDV3-202ENST00000420115 TPD52L1Q16890 204 aaPredicted RBP11.88□□□□□ -0.51
CDV3-202ENST00000420115 MTHFSDQ2M296 383 aaKnown RBP11.88□□□□□ -0.51
CDV3-202ENST00000420115 TM6SF1Q9BZW5 370 aa11.88□□□□□ -0.51
CDV3-202ENST00000420115 CXorf56Q9H5V9 222 aa11.88□□□□□ -0.51
CDV3-202ENST00000420115 ZSWIM6Q9HCJ5 1215 aa11.88□□□□□ -0.51
CDV3-202ENST00000420115 FAM208AQ9UK61 1670 aaKnown RBP11.88□□□□□ -0.51
CDV3-202ENST00000420115 ITSN1Q15811 1721 aa11.88□□□□□ -0.51
CDV3-202ENST00000420115 RBM6P78332 1123 aaKnown RBP11.87□□□□□ -0.51
CDV3-202ENST00000420115 ADCK5Q3MIX3 580 aa11.87□□□□□ -0.51
CDV3-202ENST00000420115 LARP1BQ659C4 914 aaKnown RBP11.87□□□□□ -0.51
CDV3-202ENST00000420115 TDRD7Q8NHU6 1098 aaKnown RBP11.87□□□□□ -0.51
CDV3-202ENST00000420115 DACT1Q9NYF0 836 aa11.87□□□□□ -0.51
CDV3-202ENST00000420115 N4BP2Q86UW6 1770 aaPredicted RBP11.87□□□□□ -0.51
CDV3-202ENST00000420115 ST5P78524 1137 aa11.87□□□□□ -0.51
CDV3-202ENST00000420115 ME3Q16798 604 aa11.87□□□□□ -0.51
CDV3-202ENST00000420115 RBM43Q6ZSC3 357 aaKnown RBP11.87□□□□□ -0.51
CDV3-202ENST00000420115 PXDNLA1KZ92 1463 aa11.87□□□□□ -0.51
CDV3-202ENST00000420115 POLA2Q14181 598 aa11.87□□□□□ -0.51
CDV3-202ENST00000420115 PPP1R42Q7Z4L9 355 aa11.87□□□□□ -0.51
CDV3-202ENST00000420115 CACTINQ8WUQ7 758 aaKnown RBP11.87□□□□□ -0.51
CDV3-202ENST00000420115 KIF1BPQ96EK5 621 aa11.87□□□□□ -0.51
CDV3-202ENST00000420115 DDX19AQ9NUU7 478 aaKnown RBP11.87□□□□□ -0.51
CDV3-202ENST00000420115 TTC21AQ8NDW8 1320 aa11.87□□□□□ -0.51
CDV3-202ENST00000420115 FBXO38Q6PIJ6 1188 aa11.86□□□□□ -0.51
CDV3-202ENST00000420115 CLIP2Q9UDT6 1046 aa11.86□□□□□ -0.51
CDV3-202ENST00000420115 TTC21BQ7Z4L5 1316 aa11.86□□□□□ -0.51
CDV3-202ENST00000420115 CRYBG1Q9Y4K1 1723 aa11.86□□□□□ -0.51
CDV3-202ENST00000420115 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDV3-202ENST00000420115 ELF2Q15723 593 aa11.86□□□□□ -0.51
CDV3-202ENST00000420115 CEP135Q66GS9 1140 aa11.86□□□□□ -0.51
CDV3-202ENST00000420115 PRPF40BQ6NWY9 871 aaKnown RBP11.86□□□□□ -0.51
CDV3-202ENST00000420115 CDC37L1Q7L3B6 337 aa11.86□□□□□ -0.51
CDV3-202ENST00000420115 FERMT3Q86UX7 667 aa11.86□□□□□ -0.51
CDV3-202ENST00000420115 NECAB1Q8N987 351 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms