RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 PNMA8AQ86V59 439 aaPredicted RBP13.69□□□□□ -0.22
TNFAIP3-202ENST00000420009 NIP7Q9Y221 180 aaKnown RBP eCLIP13.69□□□□□ -0.22
TNFAIP3-202ENST00000420009 COL4A5P29400 1685 aa13.69□□□□□ -0.22
TNFAIP3-202ENST00000420009 GPC2Q8N158 579 aa13.68□□□□□ -0.22
TNFAIP3-202ENST00000420009 ABCC12Q96J65 1359 aa13.68□□□□□ -0.22
TNFAIP3-202ENST00000420009 LTBP1Q14766 1721 aa13.67□□□□□ -0.22
TNFAIP3-202ENST00000420009 HSPA8P11142 646 aaKnown RBP13.67□□□□□ -0.22
TNFAIP3-202ENST00000420009 LBX1P52954 281 aa13.67□□□□□ -0.22
TNFAIP3-202ENST00000420009 CRY2Q49AN0 593 aa13.67□□□□□ -0.22
TNFAIP3-202ENST00000420009 MAP1SQ66K74 1059 aaPredicted RBP13.67□□□□□ -0.22
TNFAIP3-202ENST00000420009 CNTROBQ8N137 903 aa13.67□□□□□ -0.22
TNFAIP3-202ENST00000420009 PSMD1Q99460 953 aa13.67□□□□□ -0.22
TNFAIP3-202ENST00000420009 LAMB4A4D0S4 1761 aa13.67□□□□□ -0.22
TNFAIP3-202ENST00000420009 RIC1Q4ADV7 1423 aa13.66□□□□□ -0.22
TNFAIP3-202ENST00000420009 ALDH1B1P30837 517 aa13.66□□□□□ -0.22
TNFAIP3-202ENST00000420009 HLFQ16534 295 aa13.66□□□□□ -0.22
TNFAIP3-202ENST00000420009 DEFB115Q30KQ5 88 aa13.66□□□□□ -0.22
TNFAIP3-202ENST00000420009 MCM10Q7L590 875 aa13.66□□□□□ -0.22
TNFAIP3-202ENST00000420009 SYNE4Q8N205 404 aa13.66□□□□□ -0.22
TNFAIP3-202ENST00000420009 CLEC11AQ9Y240 323 aa13.66□□□□□ -0.22
TNFAIP3-202ENST00000420009 WDR33Q9C0J8 1336 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-202ENST00000420009 IBTKQ9P2D0 1353 aaPredicted RBP13.64□□□□□ -0.23
TNFAIP3-202ENST00000420009 FAM177BA6PVY3 158 aa13.64□□□□□ -0.23
TNFAIP3-202ENST00000420009 MAP2K1Q02750 393 aaPredicted RBP13.64□□□□□ -0.23
TNFAIP3-202ENST00000420009 CC2D2BQ6DHV5 1058 aa13.64□□□□□ -0.23
TNFAIP3-202ENST00000420009 RTF1Q92541 710 aaKnown RBP13.64□□□□□ -0.23
TNFAIP3-202ENST00000420009 CFAP53Q96M91 514 aa13.64□□□□□ -0.23
TNFAIP3-202ENST00000420009 DDX21Q9NR30 783 aaKnown RBP eCLIP13.64□□□□□ -0.23
TNFAIP3-202ENST00000420009 HTATSF1O43719 755 aaKnown RBP13.63□□□□□ -0.23
TNFAIP3-202ENST00000420009 HOXA10P31260 410 aaPredicted RBP13.63□□□□□ -0.23
TNFAIP3-202ENST00000420009 SCNN1DP51172 638 aa13.63□□□□□ -0.23
TNFAIP3-202ENST00000420009 CNGB1Q14028 1251 aaPredicted RBP13.63□□□□□ -0.23
TNFAIP3-202ENST00000420009 DCTN1Q14203 1278 aa13.63□□□□□ -0.23
TNFAIP3-202ENST00000420009 CCER1Q8TC90 406 aaPredicted RBP13.63□□□□□ -0.23
TNFAIP3-202ENST00000420009 JDP2Q8WYK2 163 aa13.63□□□□□ -0.23
TNFAIP3-202ENST00000420009 ABHD8Q96I13 439 aa13.63□□□□□ -0.23
TNFAIP3-202ENST00000420009 ABT1Q9ULW3 272 aaKnown RBP13.63□□□□□ -0.23
TNFAIP3-202ENST00000420009 ERVV-1B6SEH8 477 aa13.62□□□□□ -0.23
TNFAIP3-202ENST00000420009 NUTM1Q86Y26 1132 aa13.62□□□□□ -0.23
TNFAIP3-202ENST00000420009 NYXQ9GZU5 481 aa13.62□□□□□ -0.23
TNFAIP3-202ENST00000420009 NUDCQ9Y266 331 aa13.62□□□□□ -0.23
TNFAIP3-202ENST00000420009 KDM3BQ7LBC6 1761 aa13.61□□□□□ -0.23
TNFAIP3-202ENST00000420009 SLC34A2O95436 690 aa13.61□□□□□ -0.23
TNFAIP3-202ENST00000420009 U2AF1L5P0DN76 240 aaPredicted RBP13.61□□□□□ -0.23
TNFAIP3-202ENST00000420009 GTF2E1P29083 439 aaPredicted RBP13.61□□□□□ -0.23
TNFAIP3-202ENST00000420009 EIF6P56537 245 aaKnown RBP13.61□□□□□ -0.23
TNFAIP3-202ENST00000420009 U2AF1Q01081 240 aaKnown RBP eCLIP13.61□□□□□ -0.237e-7■■■■□ 23.3
TNFAIP3-202ENST00000420009 GRIPAP1Q4V328 841 aa13.61□□□□□ -0.23
TNFAIP3-202ENST00000420009 GJA3Q9Y6H8 435 aa13.61□□□□□ -0.23
TNFAIP3-202ENST00000420009 MAP3K15Q6ZN16 1313 aa13.61□□□□□ -0.23
TNFAIP3-202ENST00000420009 UBN2Q6ZU65 1347 aa13.61□□□□□ -0.23
TNFAIP3-202ENST00000420009 LMOD1P29536 600 aaPredicted RBP13.6□□□□□ -0.23
TNFAIP3-202ENST00000420009 EPS15P42566 896 aa13.6□□□□□ -0.23
TNFAIP3-202ENST00000420009 FMR1Q06787 632 aaKnown RBP eCLIP13.6□□□□□ -0.23
TNFAIP3-202ENST00000420009 TAF7Q15545 349 aaPredicted RBP13.6□□□□□ -0.23
TNFAIP3-202ENST00000420009 SLC51AQ86UW1 340 aa13.6□□□□□ -0.23
TNFAIP3-202ENST00000420009 CAPNS2Q96L46 248 aa13.6□□□□□ -0.23
TNFAIP3-202ENST00000420009 ECE1P42892 770 aa13.59□□□□□ -0.23
TNFAIP3-202ENST00000420009 FAM161AQ3B820 660 aa13.59□□□□□ -0.23
TNFAIP3-202ENST00000420009 CST9Q5W186 159 aa13.59□□□□□ -0.23
TNFAIP3-202ENST00000420009 USP50Q70EL3 339 aaPredicted RBP13.59□□□□□ -0.23
TNFAIP3-202ENST00000420009 LARGE2Q8N3Y3 721 aa13.59□□□□□ -0.23
TNFAIP3-202ENST00000420009 RPGRQ92834 1020 aaKnown RBP13.59□□□□□ -0.23
TNFAIP3-202ENST00000420009 NUP98P52948 1817 aa13.59□□□□□ -0.23
TNFAIP3-202ENST00000420009 TRAF5O00463 557 aa13.58□□□□□ -0.24
TNFAIP3-202ENST00000420009 PPP2R1AP30153 589 aa13.58□□□□□ -0.24
TNFAIP3-202ENST00000420009 TTLL7Q6ZT98 887 aa13.58□□□□□ -0.24
TNFAIP3-202ENST00000420009 CRAMP1Q96RY5 1269 aa13.58□□□□□ -0.24
TNFAIP3-202ENST00000420009 MIS18AQ9NYP9 233 aa13.58□□□□□ -0.24
TNFAIP3-202ENST00000420009 TRPM7Q96QT4 1865 aa13.57□□□□□ -0.24
TNFAIP3-202ENST00000420009 PPEF1O14829 653 aaPredicted RBP13.57□□□□□ -0.24
TNFAIP3-202ENST00000420009 NTSR2O95665 410 aa13.57□□□□□ -0.24
TNFAIP3-202ENST00000420009 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
TNFAIP3-202ENST00000420009 GPTP24298 496 aa13.57□□□□□ -0.24
TNFAIP3-202ENST00000420009 SUSD4Q5VX71 490 aa13.57□□□□□ -0.24
TNFAIP3-202ENST00000420009 CYP4F22Q6NT55 531 aa13.57□□□□□ -0.24
TNFAIP3-202ENST00000420009 KIF6Q6ZMV9 814 aa13.57□□□□□ -0.24
TNFAIP3-202ENST00000420009 C3orf67Q6ZVT6 689 aa13.57□□□□□ -0.24
TNFAIP3-202ENST00000420009 GPR101Q96P66 508 aaPredicted RBP13.57□□□□□ -0.24
TNFAIP3-202ENST00000420009 TLL2Q9Y6L7 1015 aa13.57□□□□□ -0.24
TNFAIP3-202ENST00000420009 C19orf67A6NJJ6 358 aa13.56□□□□□ -0.24
TNFAIP3-202ENST00000420009 NIM1KQ8IY84 436 aa13.56□□□□□ -0.24
TNFAIP3-202ENST00000420009 ZNF34Q8IZ26 560 aa13.56□□□□□ -0.24
TNFAIP3-202ENST00000420009 NGEFQ8N5V2 710 aa13.56□□□□□ -0.24
TNFAIP3-202ENST00000420009 PNISRQ8TF01 805 aaKnown RBP13.56□□□□□ -0.24
TNFAIP3-202ENST00000420009 RBM17Q96I25 401 aaKnown RBP13.56□□□□□ -0.24
TNFAIP3-202ENST00000420009 ZBTB3Q9H5J0 574 aa13.56□□□□□ -0.24
TNFAIP3-202ENST00000420009 GPRC5DQ9NZD1 345 aa13.56□□□□□ -0.24
TNFAIP3-202ENST00000420009 PPIP5K2O43314 1243 aa13.55□□□□□ -0.24
TNFAIP3-202ENST00000420009 RGS19P49795 217 aa13.55□□□□□ -0.24
TNFAIP3-202ENST00000420009 EIF4A1P60842 406 aaKnown RBP13.55□□□□□ -0.24
TNFAIP3-202ENST00000420009 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
TNFAIP3-202ENST00000420009 PAXIP1Q6ZW49 1069 aaPredicted RBP13.55□□□□□ -0.24
TNFAIP3-202ENST00000420009 SPDYE1Q8NFV5 336 aaPredicted RBP13.55□□□□□ -0.24
TNFAIP3-202ENST00000420009 BEGAINQ9BUH8 593 aa13.55□□□□□ -0.24
TNFAIP3-202ENST00000420009 VPS33BQ9H267 617 aa13.55□□□□□ -0.24
TNFAIP3-202ENST00000420009 ADARB2Q9NS39 739 aaKnown RBP13.55□□□□□ -0.24
TNFAIP3-202ENST00000420009 ERBB4Q15303 1308 aa13.55□□□□□ -0.24
TNFAIP3-202ENST00000420009 MYL6BP14649 208 aa13.54□□□□□ -0.24
TNFAIP3-202ENST00000420009 MAP2K2P36507 400 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms