RNA–Protein interactions for RNA: ENST00000419905.5

LINC01393-201, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 2 BASIC

Gene LINC01393, Length 746 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-201ENST00000419905 RXRBP28702 533 aa8.73□□□□□ -1.01
LINC01393-201ENST00000419905 ZC3H6P61129 1189 aaKnown RBP8.73□□□□□ -1.01
LINC01393-201ENST00000419905 RBM6P78332 1123 aaKnown RBP8.73□□□□□ -1.01
LINC01393-201ENST00000419905 KRT76Q01546 638 aa8.73□□□□□ -1.01
LINC01393-201ENST00000419905 MORC1Q86VD1 984 aa8.73□□□□□ -1.01
LINC01393-201ENST00000419905 SULF1Q8IWU6 871 aa8.73□□□□□ -1.01
LINC01393-201ENST00000419905 CDCA7Q9BWT1 371 aaPredicted RBP8.73□□□□□ -1.01
LINC01393-201ENST00000419905 SLIT2O94813 1529 aa8.73□□□□□ -1.01
LINC01393-201ENST00000419905 MYOM1P52179 1685 aa8.72□□□□□ -1.01
LINC01393-201ENST00000419905 USP54Q70EL1 1684 aa8.72□□□□□ -1.01
LINC01393-201ENST00000419905 CDK12Q9NYV4 1490 aaPredicted RBP8.72□□□□□ -1.01
LINC01393-201ENST00000419905 VPS72Q15906 364 aa8.72□□□□□ -1.01
LINC01393-201ENST00000419905 CNTNAP3BQ96NU0 1288 aa8.72□□□□□ -1.01
LINC01393-201ENST00000419905 USB1Q9BQ65 265 aaKnown RBP8.72□□□□□ -1.01
LINC01393-201ENST00000419905 CNTNAP3Q9BZ76 1288 aa8.72□□□□□ -1.01
LINC01393-201ENST00000419905 GGNBP2Q9H3C7 697 aa8.72□□□□□ -1.01
LINC01393-201ENST00000419905 BTG4Q9NY30 223 aa8.72□□□□□ -1.01
LINC01393-201ENST00000419905 FLT4P35916 1363 aa8.72□□□□□ -1.01
LINC01393-201ENST00000419905 ABCA3Q99758 1704 aa8.71□□□□□ -1.01
LINC01393-201ENST00000419905 FYB1O15117 783 aa8.71□□□□□ -1.02
LINC01393-201ENST00000419905 ZNF385CQ66K41 422 aaPredicted RBP8.71□□□□□ -1.02
LINC01393-201ENST00000419905 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.71□□□□□ -1.02
LINC01393-201ENST00000419905 SVOPQ8N4V2 548 aa8.71□□□□□ -1.02
LINC01393-201ENST00000419905 THRAP3Q9Y2W1 955 aaKnown RBP8.71□□□□□ -1.02
LINC01393-201ENST00000419905 NWD2Q9ULI1 1742 aa8.71□□□□□ -1.02
LINC01393-201ENST00000419905 ATRNO75882 1429 aa8.71□□□□□ -1.02
LINC01393-201ENST00000419905 MAN1A2O60476 641 aa8.7□□□□□ -1.02
LINC01393-201ENST00000419905 LCE3BQ5TA77 95 aa8.7□□□□□ -1.02
LINC01393-201ENST00000419905 TOM1L2Q6ZVM7 507 aa8.7□□□□□ -1.02
LINC01393-201ENST00000419905 ARHGEF25Q86VW2 580 aa8.7□□□□□ -1.02
LINC01393-201ENST00000419905 CFAP53Q96M91 514 aa8.7□□□□□ -1.02
LINC01393-201ENST00000419905 QTRT2Q9H974 415 aaKnown RBP8.7□□□□□ -1.02
LINC01393-201ENST00000419905 STRN4Q9NRL3 753 aa8.7□□□□□ -1.02
LINC01393-201ENST00000419905 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.7□□□□□ -1.02
LINC01393-201ENST00000419905 CRB1P82279 1406 aa8.7□□□□□ -1.02
LINC01393-201ENST00000419905 NFAT5O94916 1531 aa8.7□□□□□ -1.02
LINC01393-201ENST00000419905 KIF20BQ96Q89 1820 aa8.69□□□□□ -1.02
LINC01393-201ENST00000419905 MSTNO14793 375 aa8.69□□□□□ -1.02
LINC01393-201ENST00000419905 IRF6O14896 467 aa8.69□□□□□ -1.02
LINC01393-201ENST00000419905 GJD4Q96KN9 370 aaPredicted RBP8.69□□□□□ -1.02
LINC01393-201ENST00000419905 WDR17Q8IZU2 1322 aa8.69□□□□□ -1.02
LINC01393-201ENST00000419905 COL5A2P05997 1499 aaPredicted RBP8.69□□□□□ -1.02
LINC01393-201ENST00000419905 MARF1Q9Y4F3 1742 aaKnown RBP8.68□□□□□ -1.02
LINC01393-201ENST00000419905 FAM83GA6ND36 823 aa8.68□□□□□ -1.02
LINC01393-201ENST00000419905 PPM1GO15355 546 aaPredicted RBP8.68□□□□□ -1.02
LINC01393-201ENST00000419905 MARSP56192 900 aaKnown RBP8.68□□□□□ -1.02
LINC01393-201ENST00000419905 CHRNA2Q15822 529 aa8.68□□□□□ -1.02
LINC01393-201ENST00000419905 TCP11L2Q8N4U5 519 aa8.68□□□□□ -1.02
LINC01393-201ENST00000419905 IP6K1Q92551 441 aa8.68□□□□□ -1.02
LINC01393-201ENST00000419905 CARD14Q9BXL6 1004 aa8.68□□□□□ -1.02
LINC01393-201ENST00000419905 MAP3K19Q56UN5 1328 aa8.68□□□□□ -1.02
LINC01393-201ENST00000419905 PLEKHG2Q9H7P9 1386 aa8.68□□□□□ -1.02
LINC01393-201ENST00000419905 PLCH1Q4KWH8 1693 aa8.68□□□□□ -1.02
LINC01393-201ENST00000419905 CRYBG1Q9Y4K1 1723 aa8.68□□□□□ -1.02
LINC01393-201ENST00000419905 INSRP06213 1382 aa8.67□□□□□ -1.02
LINC01393-201ENST00000419905 BCL9LQ86UU0 1499 aa8.67□□□□□ -1.02
LINC01393-201ENST00000419905 GPR161Q8N6U8 529 aaKnown RBP8.67□□□□□ -1.02
LINC01393-201ENST00000419905 SCARF2Q96GP6 870 aaPredicted RBP8.67□□□□□ -1.02
LINC01393-201ENST00000419905 NLRP2Q9NX02 1062 aa8.67□□□□□ -1.02
LINC01393-201ENST00000419905 SPATA31A5Q5VU36 1347 aa8.66□□□□□ -1.02
LINC01393-201ENST00000419905 SPATA31A7Q8IWB4 1347 aa8.66□□□□□ -1.02
LINC01393-201ENST00000419905 ARHGEF15O94989 841 aa8.66□□□□□ -1.02
LINC01393-201ENST00000419905 NEFMP07197 916 aa8.66□□□□□ -1.02
LINC01393-201ENST00000419905 HOXC9P31274 260 aa8.66□□□□□ -1.02
LINC01393-201ENST00000419905 RALBP1Q15311 655 aa8.66□□□□□ -1.02
LINC01393-201ENST00000419905 CC2D1BQ5T0F9 858 aaKnown RBP8.66□□□□□ -1.02
LINC01393-201ENST00000419905 BARGINQ6ZT62 677 aa8.66□□□□□ -1.02
LINC01393-201ENST00000419905 ANKRD24Q8TF21 1146 aa8.66□□□□□ -1.02
LINC01393-201ENST00000419905 PHOX2BQ99453 314 aa8.66□□□□□ -1.02
LINC01393-201ENST00000419905 CARD10Q9BWT7 1032 aa8.66□□□□□ -1.02
LINC01393-201ENST00000419905 NUDCQ9Y266 331 aa8.66□□□□□ -1.02
LINC01393-201ENST00000419905 SPATA31A1Q5TZJ5 1347 aa8.65□□□□□ -1.02
LINC01393-201ENST00000419905 TNNT2P45379 298 aaPredicted RBP8.65□□□□□ -1.02
LINC01393-201ENST00000419905 PDE3BQ13370 1112 aa8.65□□□□□ -1.02
LINC01393-201ENST00000419905 RRS1Q15050 365 aaKnown RBP8.65□□□□□ -1.02
LINC01393-201ENST00000419905 Q8N3U1 123 aa8.65□□□□□ -1.02
LINC01393-201ENST00000419905 RAPGEF4Q8WZA2 1011 aa8.65□□□□□ -1.02
LINC01393-201ENST00000419905 ANKRD26Q9UPS8 1709 aa8.65□□□□□ -1.03
LINC01393-201ENST00000419905 LMO7Q8WWI1 1683 aa8.65□□□□□ -1.03
LINC01393-201ENST00000419905 FAM208AQ9UK61 1670 aaKnown RBP8.65□□□□□ -1.03
LINC01393-201ENST00000419905 PRKCSHP14314 528 aaPredicted RBP8.64□□□□□ -1.03
LINC01393-201ENST00000419905 TIMP2P16035 220 aa8.64□□□□□ -1.03
LINC01393-201ENST00000419905 NNTQ13423 1086 aa8.64□□□□□ -1.03
LINC01393-201ENST00000419905 SF3B2Q13435 895 aaKnown RBP8.64□□□□□ -1.03
LINC01393-201ENST00000419905 USP35Q9P2H5 1018 aa8.64□□□□□ -1.03
LINC01393-201ENST00000419905 CAMTA1Q9Y6Y1 1673 aa8.63□□□□□ -1.03
LINC01393-201ENST00000419905 ADH1CP00326 375 aa8.63□□□□□ -1.03
LINC01393-201ENST00000419905 IL2RBP14784 551 aa8.63□□□□□ -1.03
LINC01393-201ENST00000419905 TATP17735 454 aaPredicted RBP8.63□□□□□ -1.03
LINC01393-201ENST00000419905 HMGB2P26583 209 aaKnown RBP8.63□□□□□ -1.03
LINC01393-201ENST00000419905 DDX10Q13206 875 aaKnown RBP8.63□□□□□ -1.03
LINC01393-201ENST00000419905 DDB1Q16531 1140 aa8.63□□□□□ -1.03
LINC01393-201ENST00000419905 LARP1Q6PKG0 1096 aaKnown RBP8.63□□□□□ -1.03
LINC01393-201ENST00000419905 POTEAQ6S8J7 498 aa8.63□□□□□ -1.03
LINC01393-201ENST00000419905 LTV1Q96GA3 475 aaPredicted RBP8.63□□□□□ -1.03
LINC01393-201ENST00000419905 SPOCK3Q9BQ16 436 aa8.63□□□□□ -1.03
LINC01393-201ENST00000419905 COL25A1Q9BXS0 654 aaPredicted RBP8.63□□□□□ -1.03
LINC01393-201ENST00000419905 NRAPQ86VF7 1730 aa8.63□□□□□ -1.03
LINC01393-201ENST00000419905 RGS12O14924 1447 aa8.63□□□□□ -1.03
LINC01393-201ENST00000419905 PER1O15534 1290 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms