RNA–Protein interactions for RNA: ENST00000419650.1

GACAT1-201, gastric cancer associated transcript 1, humanhuman

TSL 4 BASIC

Gene GACAT1, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT1-201ENST00000419650 CNKSR1Q969H4 720 aa11.05□□□□□ -0.64
GACAT1-201ENST00000419650 DICER1Q9UPY3 1922 aaKnown RBP11.05□□□□□ -0.64
GACAT1-201ENST00000419650 RIC1Q4ADV7 1423 aa11.04□□□□□ -0.64
GACAT1-201ENST00000419650 KLRG2A4D1S0 409 aaPredicted RBP11.04□□□□□ -0.64
GACAT1-201ENST00000419650 NTSR2O95665 410 aa11.04□□□□□ -0.64
GACAT1-201ENST00000419650 NPR1P16066 1061 aa11.04□□□□□ -0.64
GACAT1-201ENST00000419650 PRELPP51888 382 aa11.04□□□□□ -0.64
GACAT1-201ENST00000419650 CCDC27Q2M243 656 aa11.04□□□□□ -0.64
GACAT1-201ENST00000419650 WWC1Q8IX03 1113 aa11.04□□□□□ -0.64
GACAT1-201ENST00000419650 FAM9BQ8IZU0 186 aa11.04□□□□□ -0.64
GACAT1-201ENST00000419650 C8orf58Q8NAV2 365 aa11.04□□□□□ -0.64
GACAT1-201ENST00000419650 DBF4Q9UBU7 674 aaPredicted RBP11.04□□□□□ -0.64
GACAT1-201ENST00000419650 SALL2Q9Y467 1007 aaPredicted RBP11.04□□□□□ -0.64
GACAT1-201ENST00000419650 NFKBIEO00221 500 aa11.03□□□□□ -0.64
GACAT1-201ENST00000419650 PARP10Q53GL7 1025 aa11.03□□□□□ -0.64
GACAT1-201ENST00000419650 PPP1R42Q7Z4L9 355 aa11.03□□□□□ -0.64
GACAT1-201ENST00000419650 ZNF428Q96B54 188 aa11.03□□□□□ -0.64
GACAT1-201ENST00000419650 DDX60Q8IY21 1712 aaKnown RBP11.02□□□□□ -0.65
GACAT1-201ENST00000419650 LMNB1P20700 586 aa11.02□□□□□ -0.65
GACAT1-201ENST00000419650 C1QTNF8P60827 252 aa11.02□□□□□ -0.65
GACAT1-201ENST00000419650 TCIRG1Q13488 830 aa11.02□□□□□ -0.65
GACAT1-201ENST00000419650 HSP90AB3PQ58FF7 597 aa11.02□□□□□ -0.65
GACAT1-201ENST00000419650 C3orf67Q6ZVT6 689 aa11.02□□□□□ -0.65
GACAT1-201ENST00000419650 TSPYL6Q8N831 410 aa11.02□□□□□ -0.65
GACAT1-201ENST00000419650 PLBD2Q8NHP8 589 aa11.02□□□□□ -0.65
GACAT1-201ENST00000419650 UTP14AQ9BVJ6 771 aaKnown RBP11.02□□□□□ -0.65
GACAT1-201ENST00000419650 HYPKQ9NX55 129 aa11.02□□□□□ -0.65
GACAT1-201ENST00000419650 CRY2Q49AN0 593 aa11.01□□□□□ -0.65
GACAT1-201ENST00000419650 OLFM4Q6UX06 510 aa11.01□□□□□ -0.65
GACAT1-201ENST00000419650 ANKRD13DQ6ZTN6 518 aa11.01□□□□□ -0.65
GACAT1-201ENST00000419650 NLRP10Q86W26 655 aa11.01□□□□□ -0.65
GACAT1-201ENST00000419650 RPGRQ92834 1020 aaKnown RBP11.01□□□□□ -0.65
GACAT1-201ENST00000419650 TAOK3Q9H2K8 898 aa11.01□□□□□ -0.65
GACAT1-201ENST00000419650 PHAXQ9H814 394 aaKnown RBP11.01□□□□□ -0.65
GACAT1-201ENST00000419650 NMRK2Q9NPI5 230 aa11.01□□□□□ -0.65
GACAT1-201ENST00000419650 IL16Q14005 1332 aa11.01□□□□□ -0.65
GACAT1-201ENST00000419650 TAF1P21675 1872 aa11□□□□□ -0.65
GACAT1-201ENST00000419650 KIF3CO14782 793 aa11□□□□□ -0.65
GACAT1-201ENST00000419650 SOGA3Q5TF21 947 aa11□□□□□ -0.65
GACAT1-201ENST00000419650 SYNE4Q8N205 404 aa11□□□□□ -0.65
GACAT1-201ENST00000419650 C7orf43Q8WVR3 580 aa11□□□□□ -0.65
GACAT1-201ENST00000419650 RNF123Q5XPI4 1314 aa11□□□□□ -0.65
GACAT1-201ENST00000419650 LTBP3Q9NS15 1303 aa11□□□□□ -0.65
GACAT1-201ENST00000419650 FANCIQ9NVI1 1328 aa11□□□□□ -0.65
GACAT1-201ENST00000419650 ATP5J2-PTCD1G3V325 749 aa10.99□□□□□ -0.65
GACAT1-201ENST00000419650 TCERG1O14776 1098 aaKnown RBP10.99□□□□□ -0.65
GACAT1-201ENST00000419650 ALDH1B1P30837 517 aa10.99□□□□□ -0.65
GACAT1-201ENST00000419650 GOLGA2Q08379 1002 aa10.99□□□□□ -0.65
GACAT1-201ENST00000419650 CCDC93Q567U6 631 aa10.99□□□□□ -0.65
GACAT1-201ENST00000419650 CCDC30Q5VVM6 783 aa10.99□□□□□ -0.65
GACAT1-201ENST00000419650 TRMT112Q9UI30 125 aaKnown RBP10.99□□□□□ -0.65
GACAT1-201ENST00000419650 ZC3H4Q9UPT8 1303 aaKnown RBP10.99□□□□□ -0.65
GACAT1-201ENST00000419650 CACNA1FO60840 1977 aa10.99□□□□□ -0.65
GACAT1-201ENST00000419650 HCLS1P14317 486 aaPredicted RBP10.98□□□□□ -0.65
GACAT1-201ENST00000419650 HOXA10P31260 410 aaPredicted RBP10.98□□□□□ -0.65
GACAT1-201ENST00000419650 TWISTNBQ3B726 338 aaPredicted RBP10.98□□□□□ -0.65
GACAT1-201ENST00000419650 SLC10A5Q5PT55 438 aa10.98□□□□□ -0.65
GACAT1-201ENST00000419650 RIC3Q7Z5B4 369 aa10.98□□□□□ -0.65
GACAT1-201ENST00000419650 SLC51AQ86UW1 340 aa10.98□□□□□ -0.65
GACAT1-201ENST00000419650 WDR63Q8IWG1 891 aa10.98□□□□□ -0.65
GACAT1-201ENST00000419650 RBM17Q96I25 401 aaKnown RBP10.98□□□□□ -0.65
GACAT1-201ENST00000419650 NLRP3Q96P20 1036 aa10.98□□□□□ -0.65
GACAT1-201ENST00000419650 ISCA1Q9BUE6 129 aa10.98□□□□□ -0.65
GACAT1-201ENST00000419650 KDM2BQ8NHM5 1336 aa10.98□□□□□ -0.65
GACAT1-201ENST00000419650 SH3TC1Q8TE82 1336 aa10.98□□□□□ -0.65
GACAT1-201ENST00000419650 PPEF1O14829 653 aaPredicted RBP10.97□□□□□ -0.65
GACAT1-201ENST00000419650 SAMD1Q6SPF0 538 aaPredicted RBP10.97□□□□□ -0.65
GACAT1-201ENST00000419650 CRAMP1Q96RY5 1269 aa10.97□□□□□ -0.65
GACAT1-201ENST00000419650 STK31Q9BXU1 1019 aa10.97□□□□□ -0.65
GACAT1-201ENST00000419650 CHMP4AQ9BY43 222 aa10.97□□□□□ -0.65
GACAT1-201ENST00000419650 SNED1Q8TER0 1413 aa10.97□□□□□ -0.65
GACAT1-201ENST00000419650 WDR90Q96KV7 1748 aa10.96□□□□□ -0.65
GACAT1-201ENST00000419650 ABCC4O15439 1325 aa10.96□□□□□ -0.65
GACAT1-201ENST00000419650 DDX58O95786 925 aaKnown RBP10.96□□□□□ -0.65
GACAT1-201ENST00000419650 FKBP4Q02790 459 aaKnown RBP eCLIP10.96□□□□□ -0.65
GACAT1-201ENST00000419650 RTL5Q5HYW3 569 aaPredicted RBP10.96□□□□□ -0.65
GACAT1-201ENST00000419650 RTKN2Q8IZC4 609 aa10.96□□□□□ -0.65
GACAT1-201ENST00000419650 FAM89AQ96GI7 184 aa10.96□□□□□ -0.65
GACAT1-201ENST00000419650 MYD88Q99836 296 aa10.96□□□□□ -0.65
GACAT1-201ENST00000419650 ZNF277Q9NRM2 450 aaPredicted RBP10.96□□□□□ -0.65
GACAT1-201ENST00000419650 LRRC37AA6NMS7 1700 aa10.95□□□□□ -0.66
GACAT1-201ENST00000419650 COL4A1P02462 1669 aa10.95□□□□□ -0.66
GACAT1-201ENST00000419650 GLTPD2A6NH11 291 aa10.95□□□□□ -0.66
GACAT1-201ENST00000419650 EXOSC9Q06265 439 aaKnown RBP10.95□□□□□ -0.66
GACAT1-201ENST00000419650 RRAGCQ9HB90 399 aa10.95□□□□□ -0.66
GACAT1-201ENST00000419650 MAP3K2Q9Y2U5 619 aa10.95□□□□□ -0.66
GACAT1-201ENST00000419650 MYH3P11055 1940 aa10.95□□□□□ -0.66
GACAT1-201ENST00000419650 COL4A5P29400 1685 aa10.95□□□□□ -0.66
GACAT1-201ENST00000419650 TRIM28Q13263 835 aaKnown RBP10.94□□□□□ -0.66
GACAT1-201ENST00000419650 G2E3Q7L622 706 aa10.94□□□□□ -0.66
GACAT1-201ENST00000419650 PSMD1Q99460 953 aa10.94□□□□□ -0.66
GACAT1-201ENST00000419650 METTL22Q9BUU2 404 aaPredicted RBP10.94□□□□□ -0.66
GACAT1-201ENST00000419650 MYH16Q9H6N6 1097 aa10.94□□□□□ -0.66
GACAT1-201ENST00000419650 ZNF521Q96K83 1311 aa10.93□□□□□ -0.66
GACAT1-201ENST00000419650 PI4KAP2A4QPH2 592 aa10.93□□□□□ -0.66
GACAT1-201ENST00000419650 IRS4O14654 1257 aaPredicted RBP10.93□□□□□ -0.66
GACAT1-201ENST00000419650 VAMP4O75379 141 aa10.93□□□□□ -0.66
GACAT1-201ENST00000419650 TOMM70O94826 608 aa10.93□□□□□ -0.66
GACAT1-201ENST00000419650 IARSP41252 1262 aaKnown RBP10.93□□□□□ -0.66
GACAT1-201ENST00000419650 CC2D2BQ6DHV5 1058 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms