RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 APPP05067 770 aa13.73□□□□□ -0.21
DDR1-232ENST00000418800 ZNF75DP51815 510 aa13.73□□□□□ -0.21
DDR1-232ENST00000418800 GYS2P54840 703 aa13.73□□□□□ -0.21
DDR1-232ENST00000418800 SNW1Q13573 536 aaKnown RBP13.73□□□□□ -0.21
DDR1-232ENST00000418800 TRPM2O94759 1503 aa13.73□□□□□ -0.21
DDR1-232ENST00000418800 MLH3Q9UHC1 1453 aa13.72□□□□□ -0.21
DDR1-232ENST00000418800 JAK2O60674 1132 aa13.72□□□□□ -0.21
DDR1-232ENST00000418800 PDILTQ8N807 584 aa13.72□□□□□ -0.21
DDR1-232ENST00000418800 DNAI1Q9UI46 699 aa13.72□□□□□ -0.21
DDR1-232ENST00000418800 WASLO00401 505 aaPredicted RBP13.72□□□□□ -0.21
DDR1-232ENST00000418800 RNF20Q5VTR2 975 aa13.72□□□□□ -0.21
DDR1-232ENST00000418800 TTLL5Q6EMB2 1281 aa13.72□□□□□ -0.21
DDR1-232ENST00000418800 EDC3Q96F86 508 aaKnown RBP13.72□□□□□ -0.21
DDR1-232ENST00000418800 BRPF1P55201 1214 aaPredicted RBP13.72□□□□□ -0.21
DDR1-232ENST00000418800 ANKRD65E5RJM6 399 aa13.71□□□□□ -0.21
DDR1-232ENST00000418800 CCDC144BQ3MJ40 725 aa13.71□□□□□ -0.21
DDR1-232ENST00000418800 CCDC144CPQ8IYA2 1237 aa13.71□□□□□ -0.21
DDR1-232ENST00000418800 MRVI1Q9Y6F6 885 aa13.71□□□□□ -0.21
DDR1-232ENST00000418800 CHST3Q7LGC8 479 aa13.71□□□□□ -0.21
DDR1-232ENST00000418800 KLHDC4Q8TBB5 520 aa13.71□□□□□ -0.21
DDR1-232ENST00000418800 FTOQ9C0B1 505 aaKnown RBP eCLIP13.71□□□□□ -0.21
DDR1-232ENST00000418800 USP44Q9H0E7 712 aa13.71□□□□□ -0.21
DDR1-232ENST00000418800 GLRX3O76003 335 aaKnown RBP13.71□□□□□ -0.22
DDR1-232ENST00000418800 SEC31AO94979 1220 aaKnown RBP13.71□□□□□ -0.22
DDR1-232ENST00000418800 PSMA5P28066 241 aa13.71□□□□□ -0.22
DDR1-232ENST00000418800 SCAND2PQ9GZW5 306 aaPredicted RBP13.71□□□□□ -0.22
DDR1-232ENST00000418800 TPCN1Q9ULQ1 816 aa13.71□□□□□ -0.22
DDR1-232ENST00000418800 PPP6R1Q9UPN7 881 aa13.71□□□□□ -0.22
DDR1-232ENST00000418800 TMC6Q7Z403 805 aa13.7□□□□□ -0.22
DDR1-232ENST00000418800 AOPEPQ8N6M6 819 aa13.7□□□□□ -0.22
DDR1-232ENST00000418800 BRF1Q92994 677 aa13.7□□□□□ -0.22
DDR1-232ENST00000418800 ZSCAN31Q96LW9 406 aaPredicted RBP13.7□□□□□ -0.22
DDR1-232ENST00000418800 SLC52A1Q9NWF4 448 aa13.7□□□□□ -0.22
DDR1-232ENST00000418800 CEP152O94986 1710 aa13.7□□□□□ -0.22
DDR1-232ENST00000418800 CTIFO43310 598 aaKnown RBP13.7□□□□□ -0.22
DDR1-232ENST00000418800 NEUROD6Q96NK8 337 aa13.7□□□□□ -0.22
DDR1-232ENST00000418800 EPC1Q9H2F5 836 aa13.7□□□□□ -0.22
DDR1-232ENST00000418800 ZNF330Q9Y3S2 320 aaPredicted RBP13.7□□□□□ -0.22
DDR1-232ENST00000418800 IQGAP1P46940 1657 aa13.7□□□□□ -0.22
DDR1-232ENST00000418800 RAD50Q92878 1312 aa13.7□□□□□ -0.22
DDR1-232ENST00000418800 DIP2CQ9Y2E4 1556 aa13.7□□□□□ -0.22
DDR1-232ENST00000418800 GTF2A1P52655 376 aaPredicted RBP13.7□□□□□ -0.22
DDR1-232ENST00000418800 TPM4P67936 248 aa13.7□□□□□ -0.22
DDR1-232ENST00000418800 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
DDR1-232ENST00000418800 LAMC1P11047 1609 aa13.69□□□□□ -0.22
DDR1-232ENST00000418800 SOS1Q07889 1333 aaPredicted RBP13.69□□□□□ -0.22
DDR1-232ENST00000418800 PTCH1Q13635 1447 aa13.69□□□□□ -0.22
DDR1-232ENST00000418800 DEPDC5O75140 1603 aa13.69□□□□□ -0.22
DDR1-232ENST00000418800 CCAR1Q8IX12 1150 aaKnown RBP13.69□□□□□ -0.22
DDR1-232ENST00000418800 YTHDC2Q9H6S0 1430 aaKnown RBP13.69□□□□□ -0.22
DDR1-232ENST00000418800 TCHHQ07283 1943 aa13.69□□□□□ -0.22
DDR1-232ENST00000418800 A0A0G2JS52 829 aa13.69□□□□□ -0.22
DDR1-232ENST00000418800 TRIM66O15016 1216 aa13.69□□□□□ -0.22
DDR1-232ENST00000418800 POLR3DP05423 398 aaPredicted RBP13.69□□□□□ -0.22
DDR1-232ENST00000418800 IBSPP21815 317 aaPredicted RBP13.69□□□□□ -0.22
DDR1-232ENST00000418800 HYPKQ9NX55 129 aa13.69□□□□□ -0.22
DDR1-232ENST00000418800 MROH1Q8NDA8 1641 aa13.69□□□□□ -0.22
DDR1-232ENST00000418800 PHACTR2O75167 634 aa13.68□□□□□ -0.22
DDR1-232ENST00000418800 NMIQ13287 307 aaPredicted RBP13.68□□□□□ -0.22
DDR1-232ENST00000418800 GOLGA6L1Q8N7Z2 621 aa13.68□□□□□ -0.22
DDR1-232ENST00000418800 ERO1AQ96HE7 468 aa13.68□□□□□ -0.22
DDR1-232ENST00000418800 RAD51AP2Q09MP3 1159 aa13.68□□□□□ -0.22
DDR1-232ENST00000418800 CREB3L3Q68CJ9 461 aa13.68□□□□□ -0.22
DDR1-232ENST00000418800 RASSF4Q9H2L5 321 aa13.68□□□□□ -0.22
DDR1-232ENST00000418800 SH2B1Q9NRF2 756 aaPredicted RBP13.68□□□□□ -0.22
DDR1-232ENST00000418800 CHPF2Q9P2E5 772 aa13.68□□□□□ -0.22
DDR1-232ENST00000418800 MORC2Q9Y6X9 1032 aaPredicted RBP13.68□□□□□ -0.22
DDR1-232ENST00000418800 MYOM1P52179 1685 aa13.68□□□□□ -0.22
DDR1-232ENST00000418800 CWF19L2Q2TBE0 894 aaKnown RBP13.68□□□□□ -0.22
DDR1-232ENST00000418800 ECHDC1Q9NTX5 307 aa13.68□□□□□ -0.22
DDR1-232ENST00000418800 MCM6Q14566 821 aa13.67□□□□□ -0.22
DDR1-232ENST00000418800 FSIP1Q8NA03 581 aa13.67□□□□□ -0.22
DDR1-232ENST00000418800 LEO1Q8WVC0 666 aaPredicted RBP13.67□□□□□ -0.22
DDR1-232ENST00000418800 DDX19AQ9NUU7 478 aaKnown RBP13.67□□□□□ -0.22
DDR1-232ENST00000418800 RGS12O14924 1447 aa13.67□□□□□ -0.22
DDR1-232ENST00000418800 CAPN2P17655 700 aa13.67□□□□□ -0.22
DDR1-232ENST00000418800 ATP2B1P20020 1258 aa13.67□□□□□ -0.22
DDR1-232ENST00000418800 SFPQP23246 707 aaKnown RBP eCLIP13.67□□□□□ -0.22
DDR1-232ENST00000418800 OSBPL3Q9H4L5 887 aa13.67□□□□□ -0.22
DDR1-232ENST00000418800 GNAT3A8MTJ3 354 aa13.67□□□□□ -0.22
DDR1-232ENST00000418800 MYL6BP14649 208 aa13.67□□□□□ -0.22
DDR1-232ENST00000418800 HSP90AB4PQ58FF6 505 aa13.67□□□□□ -0.22
DDR1-232ENST00000418800 LSG1Q9H089 658 aaKnown RBP13.67□□□□□ -0.22
DDR1-232ENST00000418800 LMOD1P29536 600 aaPredicted RBP13.66□□□□□ -0.22
DDR1-232ENST00000418800 OTUD7BQ6GQQ9 843 aa13.66□□□□□ -0.22
DDR1-232ENST00000418800 CCDC129Q6ZRS4 1044 aa13.66□□□□□ -0.22
DDR1-232ENST00000418800 CWC15Q9P013 229 aaKnown RBP13.66□□□□□ -0.22
DDR1-232ENST00000418800 PIP4K2AP48426 406 aaPredicted RBP13.66□□□□□ -0.22
DDR1-232ENST00000418800 LEKR1Q6ZMV7 388 aa13.66□□□□□ -0.22
DDR1-232ENST00000418800 CEP57L1Q8IYX8 460 aa13.66□□□□□ -0.22
DDR1-232ENST00000418800 CCDC171Q6TFL3 1326 aa13.66□□□□□ -0.22
DDR1-232ENST00000418800 SERPINC1P01008 464 aa13.66□□□□□ -0.22
DDR1-232ENST00000418800 RBM6P78332 1123 aaKnown RBP13.66□□□□□ -0.22
DDR1-232ENST00000418800 STK38Q15208 465 aa13.66□□□□□ -0.22
DDR1-232ENST00000418800 LRRC8AQ8IWT6 810 aa13.66□□□□□ -0.22
DDR1-232ENST00000418800 DRC1Q96MC2 740 aa13.66□□□□□ -0.22
DDR1-232ENST00000418800 COL9A3Q14050 684 aaPredicted RBP13.65□□□□□ -0.22
DDR1-232ENST00000418800 MPRIPQ6WCQ1 1025 aa13.65□□□□□ -0.22
DDR1-232ENST00000418800 DNAAF4Q8WXU2 420 aa13.65□□□□□ -0.22
DDR1-232ENST00000418800 MAP3K19Q56UN5 1328 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms