RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 CNKSR1Q969H4 720 aa26.69■■□□□ 1.86
PKNOX1-202ENST00000418336 ISCA1Q9BUE6 129 aa26.69■■□□□ 1.86
PKNOX1-202ENST00000418336 SLC10A5Q5PT55 438 aa26.68■■□□□ 1.86
PKNOX1-202ENST00000418336 C9orf131Q5VYM1 1079 aa26.68■■□□□ 1.86
PKNOX1-202ENST00000418336 LAMB2P55268 1798 aa26.67■■□□□ 1.86
PKNOX1-202ENST00000418336 CCER2I3L3R5 266 aa26.67■■□□□ 1.86
PKNOX1-202ENST00000418336 C21orf2O43822 256 aa26.67■■□□□ 1.86
PKNOX1-202ENST00000418336 HSP90AB3PQ58FF7 597 aa26.67■■□□□ 1.86
PKNOX1-202ENST00000418336 SYNE4Q8N205 404 aa26.67■■□□□ 1.86
PKNOX1-202ENST00000418336 HOXA10P31260 410 aaPredicted RBP26.66■■□□□ 1.86
PKNOX1-202ENST00000418336 TWISTNBQ3B726 338 aaPredicted RBP26.66■■□□□ 1.86
PKNOX1-202ENST00000418336 PPP1R42Q7Z4L9 355 aa26.66■■□□□ 1.86
PKNOX1-202ENST00000418336 UTP14AQ9BVJ6 771 aaKnown RBP26.66■■□□□ 1.86
PKNOX1-202ENST00000418336 RNF123Q5XPI4 1314 aa26.65■■□□□ 1.86
PKNOX1-202ENST00000418336 CCDC30Q5VVM6 783 aa26.65■■□□□ 1.86
PKNOX1-202ENST00000418336 DDX60Q8IY21 1712 aaKnown RBP26.65■■□□□ 1.86
PKNOX1-202ENST00000418336 VAMP4O75379 141 aa26.63■■□□□ 1.85
PKNOX1-202ENST00000418336 GTF2E1P29083 439 aaPredicted RBP26.63■■□□□ 1.85
PKNOX1-202ENST00000418336 TRIM28Q13263 835 aaKnown RBP26.63■■□□□ 1.85
PKNOX1-202ENST00000418336 SLC51AQ86UW1 340 aa26.63■■□□□ 1.85
PKNOX1-202ENST00000418336 ZNF219Q9P2Y4 722 aaPredicted RBP26.63■■□□□ 1.85
PKNOX1-202ENST00000418336 CCDC88AQ3V6T2 1871 aa26.63■■□□□ 1.85
PKNOX1-202ENST00000418336 LTBP3Q9NS15 1303 aa26.63■■□□□ 1.85
PKNOX1-202ENST00000418336 OLFM4Q6UX06 510 aa26.62■■□□□ 1.85
PKNOX1-202ENST00000418336 TCERG1O14776 1098 aaKnown RBP26.61■■□□□ 1.85
PKNOX1-202ENST00000418336 EXOSC9Q06265 439 aaKnown RBP26.61■■□□□ 1.85
PKNOX1-202ENST00000418336 G2E3Q7L622 706 aa26.61■■□□□ 1.85
PKNOX1-202ENST00000418336 RNF181Q9P0P0 153 aa26.61■■□□□ 1.85
PKNOX1-202ENST00000418336 TIAM2Q8IVF5 1701 aa26.6■■□□□ 1.85
PKNOX1-202ENST00000418336 ATP5J2-PTCD1G3V325 749 aa26.6■■□□□ 1.85
PKNOX1-202ENST00000418336 DICER1Q9UPY3 1922 aaKnown RBP26.6■■□□□ 1.85
PKNOX1-202ENST00000418336 LMNB1P20700 586 aa26.59■■□□□ 1.85
PKNOX1-202ENST00000418336 ZNF428Q96B54 188 aa26.59■■□□□ 1.85
PKNOX1-202ENST00000418336 COL4A1P02462 1669 aa26.58■■□□□ 1.85
PKNOX1-202ENST00000418336 SH3TC1Q8TE82 1336 aa26.58■■□□□ 1.85
PKNOX1-202ENST00000418336 HCLS1P14317 486 aaPredicted RBP26.57■■□□□ 1.84
PKNOX1-202ENST00000418336 ALDH1B1P30837 517 aa26.57■■□□□ 1.84
PKNOX1-202ENST00000418336 GOLGA2Q08379 1002 aa26.57■■□□□ 1.84
PKNOX1-202ENST00000418336 ZNF526Q8TF50 670 aaPredicted RBP26.57■■□□□ 1.84
PKNOX1-202ENST00000418336 CRAMP1Q96RY5 1269 aa26.57■■□□□ 1.84
PKNOX1-202ENST00000418336 CHMP4AQ9BY43 222 aa26.57■■□□□ 1.84
PKNOX1-202ENST00000418336 TRMT112Q9UI30 125 aaKnown RBP26.57■■□□□ 1.84
PKNOX1-202ENST00000418336 KIF3CO14782 793 aa26.56■■□□□ 1.84
PKNOX1-202ENST00000418336 RIC3Q7Z5B4 369 aa26.56■■□□□ 1.84
PKNOX1-202ENST00000418336 METTL22Q9BUU2 404 aaPredicted RBP26.56■■□□□ 1.84
PKNOX1-202ENST00000418336 GPBP1L1Q9HC44 474 aaPredicted RBP26.56■■□□□ 1.84
PKNOX1-202ENST00000418336 CACNA1FO60840 1977 aa26.56■■□□□ 1.84
PKNOX1-202ENST00000418336 SOGA3Q5TF21 947 aa26.55■■□□□ 1.84
PKNOX1-202ENST00000418336 FAM89AQ96GI7 184 aa26.55■■□□□ 1.84
PKNOX1-202ENST00000418336 NLRP3Q96P20 1036 aa26.55■■□□□ 1.84
PKNOX1-202ENST00000418336 SLC4A2P04920 1241 aa26.54■■□□□ 1.84
PKNOX1-202ENST00000418336 IGKV5-2P06315 115 aa26.54■■□□□ 1.84
PKNOX1-202ENST00000418336 KSR2Q6VAB6 950 aa26.54■■□□□ 1.84
PKNOX1-202ENST00000418336 MYD88Q99836 296 aa26.54■■□□□ 1.84
PKNOX1-202ENST00000418336 TAOK3Q9H2K8 898 aa26.54■■□□□ 1.84
PKNOX1-202ENST00000418336 MYH16Q9H6N6 1097 aa26.54■■□□□ 1.84
PKNOX1-202ENST00000418336 ABCC4O15439 1325 aa26.54■■□□□ 1.84
PKNOX1-202ENST00000418336 ZC3H4Q9UPT8 1303 aaKnown RBP26.54■■□□□ 1.84
PKNOX1-202ENST00000418336 PI4KAP2A4QPH2 592 aa26.53■■□□□ 1.84
PKNOX1-202ENST00000418336 CCDC93Q567U6 631 aa26.53■■□□□ 1.84
PKNOX1-202ENST00000418336 PI4KAP1Q8N8J0 262 aa26.53■■□□□ 1.84
PKNOX1-202ENST00000418336 MAP3K2Q9Y2U5 619 aa26.53■■□□□ 1.84
PKNOX1-202ENST00000418336 TAF1P21675 1872 aa26.53■■□□□ 1.84
PKNOX1-202ENST00000418336 RPGRQ92834 1020 aaKnown RBP26.52■■□□□ 1.84
PKNOX1-202ENST00000418336 RBM17Q96I25 401 aaKnown RBP26.52■■□□□ 1.84
PKNOX1-202ENST00000418336 STK31Q9BXU1 1019 aa26.52■■□□□ 1.84
PKNOX1-202ENST00000418336 FKBP4Q02790 459 aaKnown RBP eCLIP26.51■■□□□ 1.836e-7■■□□□ 14.1
PKNOX1-202ENST00000418336 CCDC191Q8NCU4 936 aa26.51■■□□□ 1.83
PKNOX1-202ENST00000418336 COL4A5P29400 1685 aa26.5■■□□□ 1.83
PKNOX1-202ENST00000418336 C1QTNF8P60827 252 aa26.5■■□□□ 1.83
PKNOX1-202ENST00000418336 FLIIQ13045 1269 aa26.5■■□□□ 1.83
PKNOX1-202ENST00000418336 MIER1Q8N108 512 aa26.5■■□□□ 1.83
PKNOX1-202ENST00000418336 ZBTB38Q8NAP3 1195 aaPredicted RBP26.5■■□□□ 1.83
PKNOX1-202ENST00000418336 NMRK2Q9NPI5 230 aa26.5■■□□□ 1.83
PKNOX1-202ENST00000418336 DDX58O95786 925 aaKnown RBP26.49■■□□□ 1.83
PKNOX1-202ENST00000418336 SF3B3Q15393 1217 aaKnown RBP26.49■■□□□ 1.83
PKNOX1-202ENST00000418336 DIEXFQ68CQ4 756 aaKnown RBP26.49■■□□□ 1.83
PKNOX1-202ENST00000418336 TRMT2AQ8IZ69 625 aaKnown RBP26.49■■□□□ 1.83
PKNOX1-202ENST00000418336 LRRC37AA6NMS7 1700 aa26.48■■□□□ 1.83
PKNOX1-202ENST00000418336 PPEF1O14829 653 aaPredicted RBP26.48■■□□□ 1.83
PKNOX1-202ENST00000418336 SLFN5Q08AF3 891 aa26.48■■□□□ 1.83
PKNOX1-202ENST00000418336 RTKN2Q8IZC4 609 aa26.48■■□□□ 1.83
PKNOX1-202ENST00000418336 PSMD1Q99460 953 aa26.48■■□□□ 1.83
PKNOX1-202ENST00000418336 PCCAP05165 728 aaPredicted RBP26.47■■□□□ 1.83
PKNOX1-202ENST00000418336 IRS4O14654 1257 aaPredicted RBP26.46■■□□□ 1.83
PKNOX1-202ENST00000418336 RTL5Q5HYW3 569 aaPredicted RBP26.46■■□□□ 1.83
PKNOX1-202ENST00000418336 CDCA7LQ96GN5 454 aa26.46■■□□□ 1.83
PKNOX1-202ENST00000418336 ZNF277Q9NRM2 450 aaPredicted RBP26.46■■□□□ 1.83
PKNOX1-202ENST00000418336 GLTPD2A6NH11 291 aa26.45■■□□□ 1.82
PKNOX1-202ENST00000418336 CC2D2BQ6DHV5 1058 aa26.45■■□□□ 1.82
PKNOX1-202ENST00000418336 CWC25Q9NXE8 425 aaPredicted RBP26.45■■□□□ 1.82
PKNOX1-202ENST00000418336 ATP6V0A2Q9Y487 856 aa26.45■■□□□ 1.82
PKNOX1-202ENST00000418336 DUOX1Q9NRD9 1551 aa26.45■■□□□ 1.82
PKNOX1-202ENST00000418336 WDR90Q96KV7 1748 aa26.45■■□□□ 1.82
PKNOX1-202ENST00000418336 NEURL1BA8MQ27 555 aa26.44■■□□□ 1.82
PKNOX1-202ENST00000418336 E9PSI1 815 aa26.44■■□□□ 1.82
PKNOX1-202ENST00000418336 GRAPQ13588 217 aa26.44■■□□□ 1.82
PKNOX1-202ENST00000418336 CWF19L2Q2TBE0 894 aaKnown RBP26.44■■□□□ 1.82
PKNOX1-202ENST00000418336 GRAPLQ8TC17 118 aaPredicted RBP26.44■■□□□ 1.82
PKNOX1-202ENST00000418336 JARID2Q92833 1246 aaPredicted RBP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms