RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 FMNL2Q96PY5 1086 aa16.77■□□□□ 0.27
HLA-DMB-258ENST00000418107 SETDB2Q96T68 719 aa16.77■□□□□ 0.27
HLA-DMB-258ENST00000418107 TAOK3Q9H2K8 898 aa16.77■□□□□ 0.27
HLA-DMB-258ENST00000418107 KCNQ3O43525 872 aa16.76■□□□□ 0.27
HLA-DMB-258ENST00000418107 PDE3AQ14432 1141 aa16.76■□□□□ 0.27
HLA-DMB-258ENST00000418107 KIF16BQ96L93 1317 aa16.75■□□□□ 0.27
HLA-DMB-258ENST00000418107 LTBP3Q9NS15 1303 aa16.75■□□□□ 0.27
HLA-DMB-258ENST00000418107 DDNO94850 711 aaPredicted RBP16.75■□□□□ 0.27
HLA-DMB-258ENST00000418107 POTEIP0CG38 1075 aa16.75■□□□□ 0.27
HLA-DMB-258ENST00000418107 POTEJP0CG39 1038 aa16.75■□□□□ 0.27
HLA-DMB-258ENST00000418107 B4GALNT3Q6L9W6 998 aa16.75■□□□□ 0.27
HLA-DMB-258ENST00000418107 PRPF40BQ6NWY9 871 aaKnown RBP16.75■□□□□ 0.27
HLA-DMB-258ENST00000418107 NPM2Q86SE8 214 aaKnown RBP16.75■□□□□ 0.27
HLA-DMB-258ENST00000418107 FTSJ3Q8IY81 847 aaKnown RBP16.75■□□□□ 0.27
HLA-DMB-258ENST00000418107 CNKSR1Q969H4 720 aa16.75■□□□□ 0.27
HLA-DMB-258ENST00000418107 DICER1Q9UPY3 1922 aaKnown RBP16.74■□□□□ 0.27
HLA-DMB-258ENST00000418107 CEMIPQ8WUJ3 1361 aa16.74■□□□□ 0.27
HLA-DMB-258ENST00000418107 BTBD11A6QL63 1104 aa16.74■□□□□ 0.27
HLA-DMB-258ENST00000418107 TCERG1O14776 1098 aaKnown RBP16.74■□□□□ 0.27
HLA-DMB-258ENST00000418107 SRGNP10124 158 aa16.74■□□□□ 0.27
HLA-DMB-258ENST00000418107 PIP4K2AP48426 406 aaPredicted RBP16.74■□□□□ 0.27
HLA-DMB-258ENST00000418107 ST5P78524 1137 aa16.74■□□□□ 0.27
HLA-DMB-258ENST00000418107 KRT24Q2M2I5 525 aa16.74■□□□□ 0.27
HLA-DMB-258ENST00000418107 STYK1Q6J9G0 422 aa16.74■□□□□ 0.27
HLA-DMB-258ENST00000418107 CHADLQ6NUI6 762 aa16.74■□□□□ 0.27
HLA-DMB-258ENST00000418107 DZIP3Q86Y13 1208 aaKnown RBP16.74■□□□□ 0.27
HLA-DMB-258ENST00000418107 PANK1Q8TE04 598 aa16.74■□□□□ 0.27
HLA-DMB-258ENST00000418107 NOB1Q9ULX3 412 aaKnown RBP16.74■□□□□ 0.27
HLA-DMB-258ENST00000418107 SLX4Q8IY92 1834 aa16.73■□□□□ 0.27
HLA-DMB-258ENST00000418107 MKRN1Q9UHC7 482 aaKnown RBP16.73■□□□□ 0.27
HLA-DMB-258ENST00000418107 DZIP1LQ8IYY4 767 aaKnown RBP16.72■□□□□ 0.27
HLA-DMB-258ENST00000418107 MRPL50Q8N5N7 158 aaKnown RBP16.72■□□□□ 0.27
HLA-DMB-258ENST00000418107 CLUAP1Q96AJ1 413 aa16.72■□□□□ 0.27
HLA-DMB-258ENST00000418107 MASTLQ96GX5 879 aa16.72■□□□□ 0.27
HLA-DMB-258ENST00000418107 CREBZFQ9NS37 354 aa16.72■□□□□ 0.27
HLA-DMB-258ENST00000418107 CACNA1SQ13698 1873 aa16.72■□□□□ 0.27
HLA-DMB-258ENST00000418107 BCORQ6W2J9 1755 aa16.71■□□□□ 0.27
HLA-DMB-258ENST00000418107 SOGA3Q5TF21 947 aa16.71■□□□□ 0.27
HLA-DMB-258ENST00000418107 USP16Q9Y5T5 823 aa16.71■□□□□ 0.27
HLA-DMB-258ENST00000418107 KDM3BQ7LBC6 1761 aa16.71■□□□□ 0.26
HLA-DMB-258ENST00000418107 PRAMEF22A3QJZ6 481 aa16.7■□□□□ 0.26
HLA-DMB-258ENST00000418107 ATF7IPQ6VMQ6 1270 aa16.7■□□□□ 0.26
HLA-DMB-258ENST00000418107 NBPF5PQ86XG9 351 aaPredicted RBP16.7■□□□□ 0.26
HLA-DMB-258ENST00000418107 COG6Q9Y2V7 657 aa16.7■□□□□ 0.26
HLA-DMB-258ENST00000418107 CACNA1FO60840 1977 aa16.7■□□□□ 0.26
HLA-DMB-258ENST00000418107 BRPF1P55201 1214 aaPredicted RBP16.69■□□□□ 0.26
HLA-DMB-258ENST00000418107 STK31Q9BXU1 1019 aa16.69■□□□□ 0.26
HLA-DMB-258ENST00000418107 ARFGEF2Q9Y6D5 1785 aa16.69■□□□□ 0.26
HLA-DMB-258ENST00000418107 CCDC93Q567U6 631 aa16.68■□□□□ 0.26
HLA-DMB-258ENST00000418107 C7orf43Q8WVR3 580 aa16.68■□□□□ 0.26
HLA-DMB-258ENST00000418107 CHMP4AQ9BY43 222 aa16.68■□□□□ 0.26
HLA-DMB-258ENST00000418107 TNNQ9UQP3 1299 aa16.68■□□□□ 0.26
HLA-DMB-258ENST00000418107 IQCA1LA6NCM1 817 aa16.67■□□□□ 0.26
HLA-DMB-258ENST00000418107 TRIM27P14373 513 aa16.67■□□□□ 0.26
HLA-DMB-258ENST00000418107 CCDC30Q5VVM6 783 aa16.67■□□□□ 0.26
HLA-DMB-258ENST00000418107 CLEC4GQ6UXB4 293 aa16.67■□□□□ 0.26
HLA-DMB-258ENST00000418107 TAF1DQ9H5J8 278 aaPredicted RBP16.67■□□□□ 0.26
HLA-DMB-258ENST00000418107 NPR1P16066 1061 aa16.66■□□□□ 0.26
HLA-DMB-258ENST00000418107 EIF4A1P60842 406 aaKnown RBP16.66■□□□□ 0.26
HLA-DMB-258ENST00000418107 OLFM4Q6UX06 510 aa16.66■□□□□ 0.26
HLA-DMB-258ENST00000418107 LDHDQ86WU2 507 aa16.66■□□□□ 0.26
HLA-DMB-258ENST00000418107 NECTIN2Q92692 538 aa16.66■□□□□ 0.26
HLA-DMB-258ENST00000418107 L3MBTL3Q96JM7 780 aaPredicted RBP16.66■□□□□ 0.26
HLA-DMB-258ENST00000418107 API5Q9BZZ5 524 aaKnown RBP16.66■□□□□ 0.26
HLA-DMB-258ENST00000418107 ZNF652Q9Y2D9 606 aa16.66■□□□□ 0.26
HLA-DMB-258ENST00000418107 PASKQ96RG2 1323 aa16.66■□□□□ 0.26
HLA-DMB-258ENST00000418107 ZNF541Q9H0D2 1346 aa16.66■□□□□ 0.26
HLA-DMB-258ENST00000418107 CNTNAP1P78357 1384 aa16.66■□□□□ 0.26
HLA-DMB-258ENST00000418107 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
HLA-DMB-258ENST00000418107 SNRPA1P09661 255 aaKnown RBP16.65■□□□□ 0.26
HLA-DMB-258ENST00000418107 RLBP1P12271 317 aa16.65■□□□□ 0.26
HLA-DMB-258ENST00000418107 ITPRIPQ8IWB1 547 aa16.65■□□□□ 0.26
HLA-DMB-258ENST00000418107 ARHGAP45Q92619 1136 aa16.65■□□□□ 0.26
HLA-DMB-258ENST00000418107 ZNF277Q9NRM2 450 aaPredicted RBP16.65■□□□□ 0.26
HLA-DMB-258ENST00000418107 FAM177BA6PVY3 158 aa16.64■□□□□ 0.26
HLA-DMB-258ENST00000418107 NBPF26B4DH59 902 aa16.64■□□□□ 0.26
HLA-DMB-258ENST00000418107 EIF2S2P20042 333 aaKnown RBP16.64■□□□□ 0.26
HLA-DMB-258ENST00000418107 FKBP4Q02790 459 aaKnown RBP eCLIP16.64■□□□□ 0.26
HLA-DMB-258ENST00000418107 EAPPQ56P03 285 aaPredicted RBP16.64■□□□□ 0.26
HLA-DMB-258ENST00000418107 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.26
HLA-DMB-258ENST00000418107 NBPF15Q8N660 670 aa16.64■□□□□ 0.26
HLA-DMB-258ENST00000418107 NIP7Q9Y221 180 aaKnown RBP eCLIP16.64■□□□□ 0.26
HLA-DMB-258ENST00000418107 KLRG2A4D1S0 409 aaPredicted RBP16.64■□□□□ 0.25
HLA-DMB-258ENST00000418107 FOXN1O15353 648 aa16.64■□□□□ 0.25
HLA-DMB-258ENST00000418107 MVPQ14764 893 aaKnown RBP16.64■□□□□ 0.25
HLA-DMB-258ENST00000418107 HDGFL1Q5TGJ6 251 aa16.64■□□□□ 0.25
HLA-DMB-258ENST00000418107 TPTE2Q6XPS3 522 aa16.64■□□□□ 0.25
HLA-DMB-258ENST00000418107 SCN4AP35499 1836 aa16.63■□□□□ 0.25
HLA-DMB-258ENST00000418107 AAMPQ13685 434 aa16.63■□□□□ 0.25
HLA-DMB-258ENST00000418107 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
HLA-DMB-258ENST00000418107 LAMB4A4D0S4 1761 aa16.62■□□□□ 0.25
HLA-DMB-258ENST00000418107 ITGBL1O95965 494 aaPredicted RBP16.62■□□□□ 0.25
HLA-DMB-258ENST00000418107 HOXB7P09629 217 aa16.62■□□□□ 0.25
HLA-DMB-258ENST00000418107 HLFQ16534 295 aa16.62■□□□□ 0.25
HLA-DMB-258ENST00000418107 TMEM57Q8N5G2 664 aa16.62■□□□□ 0.25
HLA-DMB-258ENST00000418107 HACL1Q9UJ83 578 aa16.62■□□□□ 0.25
HLA-DMB-258ENST00000418107 TMEM88BA6NKF7 163 aa16.61■□□□□ 0.25
HLA-DMB-258ENST00000418107 VEGFBP49765 207 aa16.61■□□□□ 0.25
HLA-DMB-258ENST00000418107 RTKN2Q8IZC4 609 aa16.61■□□□□ 0.25
HLA-DMB-258ENST00000418107 CHMP4BQ9H444 224 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms