RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 TPD52L1Q16890 204 aaPredicted RBP9.31□□□□□ -0.92
VRK2-203ENST00000417641 PRPF40BQ6NWY9 871 aaKnown RBP9.31□□□□□ -0.92
VRK2-203ENST00000417641 LEO1Q8WVC0 666 aaPredicted RBP9.31□□□□□ -0.92
VRK2-203ENST00000417641 SCAND2PQ9GZW5 306 aaPredicted RBP9.31□□□□□ -0.92
VRK2-203ENST00000417641 CLIP2Q9UDT6 1046 aa9.31□□□□□ -0.92
VRK2-203ENST00000417641 ZNF215Q9UL58 517 aaPredicted RBP9.31□□□□□ -0.92
VRK2-203ENST00000417641 ADCY9O60503 1353 aa9.31□□□□□ -0.92
VRK2-203ENST00000417641 GLRX3O76003 335 aaKnown RBP9.31□□□□□ -0.92
VRK2-203ENST00000417641 ZNF165P49910 485 aa9.31□□□□□ -0.92
VRK2-203ENST00000417641 MRFAP1L1Q96HT8 127 aa9.31□□□□□ -0.92
VRK2-203ENST00000417641 RIMS1Q86UR5 1692 aaKnown RBP9.3□□□□□ -0.92
VRK2-203ENST00000417641 NEMFO60524 1076 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 NR1I2O75469 434 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 CAVIN2O95810 425 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 CCZ1BP86790 482 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 CCZ1P86791 482 aaPredicted RBP9.3□□□□□ -0.92
VRK2-203ENST00000417641 ARID5BQ14865 1188 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 CREB3L3Q68CJ9 461 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 FBXO38Q6PIJ6 1188 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 ERO1AQ96HE7 468 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 DNAJC25Q9H1X3 360 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 IGSF1Q8N6C5 1336 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 FERMT3Q86UX7 667 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 TXNDC2Q86VQ3 553 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 DRC7Q8IY82 874 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 RUFY2Q8WXA3 655 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 MAP4K1Q92918 833 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 ZNF446Q9NWS9 450 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 BABAM1Q9NWV8 329 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 CHMP3Q9Y3E7 222 aa9.3□□□□□ -0.92
VRK2-203ENST00000417641 CEP170BQ9Y4F5 1589 aaPredicted RBP9.3□□□□□ -0.92
VRK2-203ENST00000417641 PLEKHG3A1L390 1219 aa9.29□□□□□ -0.92
VRK2-203ENST00000417641 PDCP20941 246 aa9.29□□□□□ -0.92
VRK2-203ENST00000417641 IRX5P78411 483 aaPredicted RBP9.29□□□□□ -0.92
VRK2-203ENST00000417641 LARP1Q6PKG0 1096 aaKnown RBP9.29□□□□□ -0.92
VRK2-203ENST00000417641 CREBRFQ8IUR6 639 aa9.29□□□□□ -0.92
VRK2-203ENST00000417641 TFIP11Q9UBB9 837 aaKnown RBP9.29□□□□□ -0.92
VRK2-203ENST00000417641 NPHP4O75161 1426 aaPredicted RBP9.29□□□□□ -0.92
VRK2-203ENST00000417641 TULP2O00295 520 aa9.29□□□□□ -0.92
VRK2-203ENST00000417641 NBPF7P0C2Y1 421 aaPredicted RBP9.29□□□□□ -0.92
VRK2-203ENST00000417641 H2AFXP16104 143 aaPredicted RBP9.29□□□□□ -0.92
VRK2-203ENST00000417641 RESTQ13127 1097 aa9.29□□□□□ -0.92
VRK2-203ENST00000417641 MTX1Q13505 466 aa9.29□□□□□ -0.92
VRK2-203ENST00000417641 TOB2Q14106 344 aaPredicted RBP9.29□□□□□ -0.92
VRK2-203ENST00000417641 DDX54Q8TDD1 881 aaKnown RBP9.29□□□□□ -0.92
VRK2-203ENST00000417641 SPATA32Q96LK8 384 aa9.29□□□□□ -0.92
VRK2-203ENST00000417641 EYA1Q99502 592 aa9.29□□□□□ -0.92
VRK2-203ENST00000417641 PHAXQ9H814 394 aaKnown RBP9.29□□□□□ -0.92
VRK2-203ENST00000417641 L2HGDHQ9H9P8 463 aa9.29□□□□□ -0.92
VRK2-203ENST00000417641 RBM8AQ9Y5S9 174 aaKnown RBP9.29□□□□□ -0.92
VRK2-203ENST00000417641 USP6P35125 1406 aa9.28□□□□□ -0.92
VRK2-203ENST00000417641 JCADQ9P266 1359 aa9.28□□□□□ -0.92
VRK2-203ENST00000417641 SLC27A2O14975 620 aa9.28□□□□□ -0.92
VRK2-203ENST00000417641 ZBTB22O15209 634 aa9.28□□□□□ -0.92
VRK2-203ENST00000417641 SRGAP3O43295 1099 aa9.28□□□□□ -0.92
VRK2-203ENST00000417641 SLC20A2Q08357 652 aa9.28□□□□□ -0.92
VRK2-203ENST00000417641 PTPN14Q15678 1187 aa9.28□□□□□ -0.92
VRK2-203ENST00000417641 BEND3Q5T5X7 828 aa9.28□□□□□ -0.92
VRK2-203ENST00000417641 C11orf57Q6ZUT1 292 aaPredicted RBP9.28□□□□□ -0.92
VRK2-203ENST00000417641 CCAR2Q8N163 923 aaKnown RBP9.28□□□□□ -0.92
VRK2-203ENST00000417641 NECTIN2Q92692 538 aa9.28□□□□□ -0.92
VRK2-203ENST00000417641 CACNA1FO60840 1977 aa9.28□□□□□ -0.92
VRK2-203ENST00000417641 TOPAZ1Q8N9V7 1692 aa9.28□□□□□ -0.92
VRK2-203ENST00000417641 ELF2Q15723 593 aa9.28□□□□□ -0.92
VRK2-203ENST00000417641 HSP90AB4PQ58FF6 505 aa9.28□□□□□ -0.92
VRK2-203ENST00000417641 IL17REQ8NFR9 667 aa9.28□□□□□ -0.92
VRK2-203ENST00000417641 ACEP12821 1306 aa9.27□□□□□ -0.93
VRK2-203ENST00000417641 CCDC66A2RUB6 948 aa9.27□□□□□ -0.93
VRK2-203ENST00000417641 TSGA10IPQ3SY00 556 aa9.27□□□□□ -0.93
VRK2-203ENST00000417641 CCDC93Q567U6 631 aa9.27□□□□□ -0.93
VRK2-203ENST00000417641 CNKSR2Q8WXI2 1034 aa9.27□□□□□ -0.93
VRK2-203ENST00000417641 EVI5LQ96CN4 794 aa9.27□□□□□ -0.93
VRK2-203ENST00000417641 ECHDC1Q9NTX5 307 aa9.27□□□□□ -0.93
VRK2-203ENST00000417641 TAF6LQ9Y6J9 622 aa9.27□□□□□ -0.93
VRK2-203ENST00000417641 SBNO1A3KN83 1393 aa9.27□□□□□ -0.93
VRK2-203ENST00000417641 CCDC69A6NI79 296 aa9.27□□□□□ -0.93
VRK2-203ENST00000417641 SLU7O95391 586 aaKnown RBP9.27□□□□□ -0.93
VRK2-203ENST00000417641 SKILP12757 684 aa9.27□□□□□ -0.93
VRK2-203ENST00000417641 ZKSCAN1P17029 563 aaPredicted RBP9.27□□□□□ -0.93
VRK2-203ENST00000417641 RPS6KB1P23443 525 aa9.27□□□□□ -0.93
VRK2-203ENST00000417641 ADD1P35611 737 aaKnown RBP9.27□□□□□ -0.93
VRK2-203ENST00000417641 ST7Q9NRC1 585 aa9.27□□□□□ -0.93
VRK2-203ENST00000417641 STAG3Q9UJ98 1225 aa9.27□□□□□ -0.93
VRK2-203ENST00000417641 NWD1Q149M9 1564 aa9.26□□□□□ -0.93
VRK2-203ENST00000417641 GNAT3A8MTJ3 354 aa9.26□□□□□ -0.93
VRK2-203ENST00000417641 NPM1P06748 294 aaKnown RBP eCLIP9.26□□□□□ -0.93
VRK2-203ENST00000417641 PSMA5P28066 241 aa9.26□□□□□ -0.93
VRK2-203ENST00000417641 CYP2C19P33261 490 aa9.26□□□□□ -0.93
VRK2-203ENST00000417641 KCNJ4P48050 445 aa9.26□□□□□ -0.93
VRK2-203ENST00000417641 ANKRD1Q15327 319 aa9.26□□□□□ -0.93
VRK2-203ENST00000417641 RNF20Q5VTR2 975 aa9.26□□□□□ -0.93
VRK2-203ENST00000417641 DHX40Q8IX18 779 aaKnown RBP9.26□□□□□ -0.93
VRK2-203ENST00000417641 ZNF592Q92610 1267 aa9.26□□□□□ -0.93
VRK2-203ENST00000417641 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.26□□□□□ -0.93
VRK2-203ENST00000417641 FHOD1Q9Y613 1164 aa9.26□□□□□ -0.93
VRK2-203ENST00000417641 V9GYY5 206 aaPredicted RBP9.26□□□□□ -0.93
VRK2-203ENST00000417641 FLT4P35916 1363 aa9.26□□□□□ -0.93
VRK2-203ENST00000417641 NPM3O75607 178 aaKnown RBP9.26□□□□□ -0.93
VRK2-203ENST00000417641 FAM227BQ96M60 508 aa9.26□□□□□ -0.93
VRK2-203ENST00000417641 TIGD1Q96MW7 591 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms