RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 PDE4DIPQ5VU43 2346 aa13.31□□□□□ -0.28
MDC1-202ENST00000416571 RASSF10A6NK89 507 aa13.3□□□□□ -0.28
MDC1-202ENST00000416571 ERVV-1B6SEH8 477 aa13.3□□□□□ -0.28
MDC1-202ENST00000416571 PPP2R1AP30153 589 aa13.3□□□□□ -0.28
MDC1-202ENST00000416571 RGS19P49795 217 aa13.3□□□□□ -0.28
MDC1-202ENST00000416571 NUTM1Q86Y26 1132 aa13.3□□□□□ -0.28
MDC1-202ENST00000416571 PNISRQ8TF01 805 aaKnown RBP13.3□□□□□ -0.28
MDC1-202ENST00000416571 ABHD8Q96I13 439 aa13.3□□□□□ -0.28
MDC1-202ENST00000416571 WBP1LQ9NX94 342 aa13.3□□□□□ -0.28
MDC1-202ENST00000416571 MIS18AQ9NYP9 233 aa13.3□□□□□ -0.28
MDC1-202ENST00000416571 TNRC18O15417 2968 aaPredicted RBP13.3□□□□□ -0.28
MDC1-202ENST00000416571 ABCC12Q96J65 1359 aa13.3□□□□□ -0.28
MDC1-202ENST00000416571 LBX1P52954 281 aa13.29□□□□□ -0.28
MDC1-202ENST00000416571 MAP2K1Q02750 393 aaPredicted RBP13.29□□□□□ -0.28
MDC1-202ENST00000416571 CRY2Q49AN0 593 aa13.29□□□□□ -0.28
MDC1-202ENST00000416571 GRIPAP1Q4V328 841 aa13.29□□□□□ -0.28
MDC1-202ENST00000416571 PAXIP1Q6ZW49 1069 aaPredicted RBP13.29□□□□□ -0.28
MDC1-202ENST00000416571 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
MDC1-202ENST00000416571 TMX4Q9H1E5 349 aaPredicted RBP13.29□□□□□ -0.28
MDC1-202ENST00000416571 RRP7AQ9Y3A4 280 aaKnown RBP13.29□□□□□ -0.28
MDC1-202ENST00000416571 MAP3K15Q6ZN16 1313 aa13.29□□□□□ -0.28
MDC1-202ENST00000416571 WDR33Q9C0J8 1336 aaKnown RBP13.29□□□□□ -0.28
MDC1-202ENST00000416571 KDM3BQ7LBC6 1761 aa13.29□□□□□ -0.28
MDC1-202ENST00000416571 DLG5Q8TDM6 1919 aa13.29□□□□□ -0.28
MDC1-202ENST00000416571 MYL6BP14649 208 aa13.28□□□□□ -0.28
MDC1-202ENST00000416571 GPTP24298 496 aa13.28□□□□□ -0.28
MDC1-202ENST00000416571 BEGAINQ9BUH8 593 aa13.28□□□□□ -0.28
MDC1-202ENST00000416571 NIM1KQ8IY84 436 aa13.27□□□□□ -0.29
MDC1-202ENST00000416571 RBM17Q96I25 401 aaKnown RBP13.27□□□□□ -0.29
MDC1-202ENST00000416571 ZBTB3Q9H5J0 574 aa13.27□□□□□ -0.29
MDC1-202ENST00000416571 DDX21Q9NR30 783 aaKnown RBP eCLIP13.27□□□□□ -0.29
MDC1-202ENST00000416571 IBTKQ9P2D0 1353 aaPredicted RBP13.27□□□□□ -0.29
MDC1-202ENST00000416571 RIC1Q4ADV7 1423 aa13.27□□□□□ -0.29
MDC1-202ENST00000416571 SNED1Q8TER0 1413 aa13.27□□□□□ -0.29
MDC1-202ENST00000416571 TCERG1O14776 1098 aaKnown RBP13.26□□□□□ -0.29
MDC1-202ENST00000416571 PPEF1O14829 653 aaPredicted RBP13.26□□□□□ -0.29
MDC1-202ENST00000416571 HOXA10P31260 410 aaPredicted RBP13.26□□□□□ -0.29
MDC1-202ENST00000416571 ECE1P42892 770 aa13.26□□□□□ -0.29
MDC1-202ENST00000416571 GRM1Q13255 1194 aa13.26□□□□□ -0.29
MDC1-202ENST00000416571 TTLL7Q6ZT98 887 aa13.26□□□□□ -0.29
MDC1-202ENST00000416571 LTBP1Q14766 1721 aa13.25□□□□□ -0.29
MDC1-202ENST00000416571 UBN2Q6ZU65 1347 aa13.25□□□□□ -0.29
MDC1-202ENST00000416571 HSPA8P11142 646 aaKnown RBP13.25□□□□□ -0.29
MDC1-202ENST00000416571 EPS15P42566 896 aa13.25□□□□□ -0.29
MDC1-202ENST00000416571 SCNN1DP51172 638 aa13.25□□□□□ -0.29
MDC1-202ENST00000416571 USP50Q70EL3 339 aaPredicted RBP13.25□□□□□ -0.29
MDC1-202ENST00000416571 PPP1R42Q7Z4L9 355 aa13.25□□□□□ -0.29
MDC1-202ENST00000416571 CRAMP1Q96RY5 1269 aa13.25□□□□□ -0.29
MDC1-202ENST00000416571 TRPM7Q96QT4 1865 aa13.25□□□□□ -0.29
MDC1-202ENST00000416571 COL4A5P29400 1685 aa13.24□□□□□ -0.29
MDC1-202ENST00000416571 PPIP5K2O43314 1243 aa13.24□□□□□ -0.29
MDC1-202ENST00000416571 EIF4A1P60842 406 aaKnown RBP13.24□□□□□ -0.29
MDC1-202ENST00000416571 SUSD4Q5VX71 490 aa13.24□□□□□ -0.29
MDC1-202ENST00000416571 NLRP3Q96P20 1036 aa13.24□□□□□ -0.29
MDC1-202ENST00000416571 MAPK8IP3Q9UPT6 1336 aa13.23□□□□□ -0.29
MDC1-202ENST00000416571 PARP10Q53GL7 1025 aa13.23□□□□□ -0.29
MDC1-202ENST00000416571 GIGYF2Q6Y7W6 1299 aaKnown RBP13.23□□□□□ -0.29
MDC1-202ENST00000416571 ZNF34Q8IZ26 560 aa13.23□□□□□ -0.29
MDC1-202ENST00000416571 CAPNS2Q96L46 248 aa13.23□□□□□ -0.29
MDC1-202ENST00000416571 PNNQ9H307 717 aaKnown RBP13.23□□□□□ -0.29
MDC1-202ENST00000416571 THSD7BQ9C0I4 1608 aa13.23□□□□□ -0.29
MDC1-202ENST00000416571 ERBB4Q15303 1308 aa13.22□□□□□ -0.29
MDC1-202ENST00000416571 NTSR2O95665 410 aa13.22□□□□□ -0.29
MDC1-202ENST00000416571 NFE2L2Q16236 605 aa13.22□□□□□ -0.29
MDC1-202ENST00000416571 SUPT20HQ8NEM7 779 aa13.22□□□□□ -0.29
MDC1-202ENST00000416571 GPR101Q96P66 508 aaPredicted RBP13.22□□□□□ -0.29
MDC1-202ENST00000416571 THUMPD2Q9BTF0 503 aaKnown RBP13.22□□□□□ -0.29
MDC1-202ENST00000416571 ADARB2Q9NS39 739 aaKnown RBP13.22□□□□□ -0.29
MDC1-202ENST00000416571 CCDC85CA6NKD9 419 aa13.21□□□□□ -0.29
MDC1-202ENST00000416571 TRAF5O00463 557 aa13.21□□□□□ -0.29
MDC1-202ENST00000416571 FMR1Q06787 632 aaKnown RBP eCLIP13.21□□□□□ -0.29
MDC1-202ENST00000416571 AOC3Q16853 763 aa13.21□□□□□ -0.29
MDC1-202ENST00000416571 CYP4F22Q6NT55 531 aa13.21□□□□□ -0.29
MDC1-202ENST00000416571 VPS33BQ9H267 617 aa13.21□□□□□ -0.29
MDC1-202ENST00000416571 ATP6V0A2Q9Y487 856 aa13.21□□□□□ -0.29
MDC1-202ENST00000416571 EIF2S2P20042 333 aaKnown RBP13.2□□□□□ -0.3
MDC1-202ENST00000416571 UTP14AQ9BVJ6 771 aaKnown RBP13.2□□□□□ -0.3
MDC1-202ENST00000416571 GPRC5DQ9NZD1 345 aa13.2□□□□□ -0.3
MDC1-202ENST00000416571 TSPYL4Q9UJ04 414 aa13.2□□□□□ -0.3
MDC1-202ENST00000416571 ZNRF3Q9ULT6 936 aa13.2□□□□□ -0.3
MDC1-202ENST00000416571 TLL2Q9Y6L7 1015 aa13.2□□□□□ -0.3
MDC1-202ENST00000416571 ANKRD36CQ5JPF3 1778 aa13.2□□□□□ -0.3
MDC1-202ENST00000416571 ABCC4O15439 1325 aa13.19□□□□□ -0.3
MDC1-202ENST00000416571 CST9Q5W186 159 aa13.19□□□□□ -0.3
MDC1-202ENST00000416571 DPP8Q6V1X1 898 aaPredicted RBP13.19□□□□□ -0.3
MDC1-202ENST00000416571 C3orf67Q6ZVT6 689 aa13.19□□□□□ -0.3
MDC1-202ENST00000416571 SLC51AQ86UW1 340 aa13.19□□□□□ -0.3
MDC1-202ENST00000416571 PLEKHF1Q96S99 279 aa13.19□□□□□ -0.3
MDC1-202ENST00000416571 BCL2L13Q9BXK5 485 aa13.19□□□□□ -0.3
MDC1-202ENST00000416571 CELF2O95319 508 aaKnown RBP13.18□□□□□ -0.3
MDC1-202ENST00000416571 MAP2K2P36507 400 aa13.18□□□□□ -0.3
MDC1-202ENST00000416571 CXCL9Q07325 125 aa13.18□□□□□ -0.3
MDC1-202ENST00000416571 HSP90AB3PQ58FF7 597 aa13.18□□□□□ -0.3
MDC1-202ENST00000416571 CIAPIN1Q6FI81 312 aa13.18□□□□□ -0.3
MDC1-202ENST00000416571 MPNDQ8N594 471 aa13.18□□□□□ -0.3
MDC1-202ENST00000416571 LAMB2P55268 1798 aa13.17□□□□□ -0.3
MDC1-202ENST00000416571 CDHR2Q9BYE9 1310 aa13.17□□□□□ -0.3
MDC1-202ENST00000416571 AOC2O75106 756 aa13.17□□□□□ -0.3
MDC1-202ENST00000416571 BBOX1O75936 387 aa13.17□□□□□ -0.3
MDC1-202ENST00000416571 GMPSP49915 693 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms