RNA–Protein interactions for RNA: ENST00000416319.5

FAM3A-207, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-207ENST00000416319 GTF2E1P29083 439 aaPredicted RBP25.16■■□□□ 1.62
FAM3A-207ENST00000416319 RIC1Q4ADV7 1423 aa25.16■■□□□ 1.62
FAM3A-207ENST00000416319 BEND3Q5T5X7 828 aa25.16■■□□□ 1.62
FAM3A-207ENST00000416319 PDZRN3Q9UPQ7 1066 aa25.16■■□□□ 1.62
FAM3A-207ENST00000416319 NEURL1BA8MQ27 555 aa25.15■■□□□ 1.62
FAM3A-207ENST00000416319 SLC10A5Q5PT55 438 aa25.15■■□□□ 1.62
FAM3A-207ENST00000416319 TRMT112Q9UI30 125 aaKnown RBP25.15■■□□□ 1.62
FAM3A-207ENST00000416319 RCAN3Q9UKA8 241 aa25.15■■□□□ 1.62
FAM3A-207ENST00000416319 SH3TC1Q8TE82 1336 aa25.14■■□□□ 1.62
FAM3A-207ENST00000416319 FAM177BA6PVY3 158 aa25.14■■□□□ 1.62
FAM3A-207ENST00000416319 PDE6BP35913 854 aa25.14■■□□□ 1.62
FAM3A-207ENST00000416319 ZBTB38Q8NAP3 1195 aaPredicted RBP25.14■■□□□ 1.62
FAM3A-207ENST00000416319 ANKRD36CQ5JPF3 1778 aa25.13■■□□□ 1.61
FAM3A-207ENST00000416319 KLRG2A4D1S0 409 aaPredicted RBP25.13■■□□□ 1.61
FAM3A-207ENST00000416319 ALDH1L1O75891 902 aa25.13■■□□□ 1.61
FAM3A-207ENST00000416319 ERFEQ4G0M1 354 aa25.13■■□□□ 1.61
FAM3A-207ENST00000416319 PXDNLA1KZ92 1463 aa25.13■■□□□ 1.61
FAM3A-207ENST00000416319 AFDNP55196 1824 aaKnown RBP25.12■■□□□ 1.61
FAM3A-207ENST00000416319 PCCAP05165 728 aaPredicted RBP25.12■■□□□ 1.61
FAM3A-207ENST00000416319 GCKRQ14397 625 aa25.12■■□□□ 1.61
FAM3A-207ENST00000416319 CWF19L2Q2TBE0 894 aaKnown RBP25.12■■□□□ 1.61
FAM3A-207ENST00000416319 NUTM1Q86Y26 1132 aa25.12■■□□□ 1.61
FAM3A-207ENST00000416319 KLHL34Q8N239 644 aa25.12■■□□□ 1.61
FAM3A-207ENST00000416319 ABCC12Q96J65 1359 aa25.11■■□□□ 1.61
FAM3A-207ENST00000416319 ATF7IPQ6VMQ6 1270 aa25.11■■□□□ 1.61
FAM3A-207ENST00000416319 SRCIN1Q9C0H9 1055 aa25.11■■□□□ 1.61
FAM3A-207ENST00000416319 KIF13BQ9NQT8 1826 aa25.11■■□□□ 1.61
FAM3A-207ENST00000416319 HSP90B1P14625 803 aaKnown RBP25.1■■□□□ 1.61
FAM3A-207ENST00000416319 ZKSCAN2Q63HK3 967 aa25.1■■□□□ 1.61
FAM3A-207ENST00000416319 SLC4A10Q6U841 1118 aa25.1■■□□□ 1.61
FAM3A-207ENST00000416319 NLGN2Q8NFZ4 835 aa25.1■■□□□ 1.61
FAM3A-207ENST00000416319 CCDC24Q8N4L8 307 aa25.09■■□□□ 1.61
FAM3A-207ENST00000416319 FAM89AQ96GI7 184 aa25.09■■□□□ 1.61
FAM3A-207ENST00000416319 H7C1W4 665 aa25.08■■□□□ 1.61
FAM3A-207ENST00000416319 TRIM27P14373 513 aa25.08■■□□□ 1.61
FAM3A-207ENST00000416319 CCT4P50991 539 aaKnown RBP25.08■■□□□ 1.61
FAM3A-207ENST00000416319 FRAT1Q92837 279 aaPredicted RBP25.08■■□□□ 1.61
FAM3A-207ENST00000416319 ABCC4O15439 1325 aa25.08■■□□□ 1.6
FAM3A-207ENST00000416319 CDHR2Q9BYE9 1310 aa25.08■■□□□ 1.6
FAM3A-207ENST00000416319 H0YIN7 160 aa25.07■■□□□ 1.6
FAM3A-207ENST00000416319 CRY2Q49AN0 593 aa25.07■■□□□ 1.6
FAM3A-207ENST00000416319 DPEP1P16444 411 aa25.06■■□□□ 1.6
FAM3A-207ENST00000416319 KCNA3P22001 575 aa25.06■■□□□ 1.6
FAM3A-207ENST00000416319 C2CD5Q86YS7 1000 aa25.06■■□□□ 1.6
FAM3A-207ENST00000416319 NLRP3Q96P20 1036 aa25.06■■□□□ 1.6
FAM3A-207ENST00000416319 A0A0G2JLW4 131 aa25.05■■□□□ 1.6
FAM3A-207ENST00000416319 IRS4O14654 1257 aaPredicted RBP25.05■■□□□ 1.6
FAM3A-207ENST00000416319 SRGNP10124 158 aa25.05■■□□□ 1.6
FAM3A-207ENST00000416319 SYNE4Q8N205 404 aa25.05■■□□□ 1.6
FAM3A-207ENST00000416319 CASP7P55210 303 aa25.04■■□□□ 1.6
FAM3A-207ENST00000416319 INTS3Q68E01 1043 aaKnown RBP25.04■■□□□ 1.6
FAM3A-207ENST00000416319 GRM8O00222 908 aa25.03■■□□□ 1.6
FAM3A-207ENST00000416319 HCLS1P14317 486 aaPredicted RBP25.03■■□□□ 1.6
FAM3A-207ENST00000416319 CHRNA5P30532 468 aa25.03■■□□□ 1.6
FAM3A-207ENST00000416319 STYK1Q6J9G0 422 aa25.03■■□□□ 1.6
FAM3A-207ENST00000416319 MASTLQ96GX5 879 aa25.03■■□□□ 1.6
FAM3A-207ENST00000416319 UTYO14607 1347 aa25.03■■□□□ 1.6
FAM3A-207ENST00000416319 NPR1P16066 1061 aa25.02■■□□□ 1.6
FAM3A-207ENST00000416319 HOXA10P31260 410 aaPredicted RBP25.02■■□□□ 1.6
FAM3A-207ENST00000416319 PLA2G12BQ9BX93 195 aa25.02■■□□□ 1.6
FAM3A-207ENST00000416319 PIM2Q9P1W9 311 aa25.02■■□□□ 1.6
FAM3A-207ENST00000416319 KIAA1551Q9HCM1 1747 aa25.01■■□□□ 1.59
FAM3A-207ENST00000416319 MS4A1P11836 297 aa25.01■■□□□ 1.59
FAM3A-207ENST00000416319 SF3B3Q15393 1217 aaKnown RBP25.01■■□□□ 1.59
FAM3A-207ENST00000416319 RTL5Q5HYW3 569 aaPredicted RBP25.01■■□□□ 1.59
FAM3A-207ENST00000416319 UBE3BQ7Z3V4 1068 aa25.01■■□□□ 1.59
FAM3A-207ENST00000416319 C9orf78Q9NZ63 289 aaPredicted RBP25.01■■□□□ 1.59
FAM3A-207ENST00000416319 ANKRD31Q8N7Z5 1873 aa25■■□□□ 1.59
FAM3A-207ENST00000416319 PDE8AO60658 829 aa25■■□□□ 1.59
FAM3A-207ENST00000416319 C3orf67Q6ZVT6 689 aa25■■□□□ 1.59
FAM3A-207ENST00000416319 DZIP1LQ8IYY4 767 aaKnown RBP25■■□□□ 1.59
FAM3A-207ENST00000416319 FTSJ3Q8IY81 847 aaKnown RBP24.99■■□□□ 1.59
FAM3A-207ENST00000416319 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.99■■□□□ 1.59
FAM3A-207ENST00000416319 CNKSR1Q969H4 720 aa24.99■■□□□ 1.59
FAM3A-207ENST00000416319 JARID2Q92833 1246 aaPredicted RBP24.98■■□□□ 1.59
FAM3A-207ENST00000416319 RPGRQ92834 1020 aaKnown RBP24.98■■□□□ 1.59
FAM3A-207ENST00000416319 USP44Q9H0E7 712 aa24.98■■□□□ 1.59
FAM3A-207ENST00000416319 ALDH1B1P30837 517 aa24.97■■□□□ 1.59
FAM3A-207ENST00000416319 DALRD3Q5D0E6 543 aaKnown RBP24.97■■□□□ 1.59
FAM3A-207ENST00000416319 TTLL6Q8N841 843 aa24.97■■□□□ 1.59
FAM3A-207ENST00000416319 ZNF622Q969S3 477 aaKnown RBP eCLIP24.97■■□□□ 1.59
FAM3A-207ENST00000416319 CLUAP1Q96AJ1 413 aa24.97■■□□□ 1.59
FAM3A-207ENST00000416319 RBM17Q96I25 401 aaKnown RBP24.97■■□□□ 1.59
FAM3A-207ENST00000416319 CRAMP1Q96RY5 1269 aa24.97■■□□□ 1.59
FAM3A-207ENST00000416319 TNNQ9UQP3 1299 aa24.97■■□□□ 1.59
FAM3A-207ENST00000416319 TNRC6CQ9HCJ0 1690 aaKnown RBP24.97■■□□□ 1.59
FAM3A-207ENST00000416319 GOLGB1Q14789 3259 aaKnown RBP24.96■■□□□ 1.59
FAM3A-207ENST00000416319 NBPF7P0C2Y1 421 aaPredicted RBP24.95■■□□□ 1.58
FAM3A-207ENST00000416319 CTSWP56202 376 aa24.95■■□□□ 1.58
FAM3A-207ENST00000416319 CCDC152Q4G0S7 254 aa24.95■■□□□ 1.58
FAM3A-207ENST00000416319 TMEM57Q8N5G2 664 aa24.95■■□□□ 1.58
FAM3A-207ENST00000416319 HDAC5Q9UQL6 1122 aa24.95■■□□□ 1.58
FAM3A-207ENST00000416319 PDE3AQ14432 1141 aa24.94■■□□□ 1.58
FAM3A-207ENST00000416319 N4BP2Q86UW6 1770 aaPredicted RBP24.94■■□□□ 1.58
FAM3A-207ENST00000416319 RTL9Q8NET4 1388 aa24.93■■□□□ 1.58
FAM3A-207ENST00000416319 DDX60Q8IY21 1712 aaKnown RBP24.93■■□□□ 1.58
FAM3A-207ENST00000416319 CSF1RP07333 972 aa24.93■■□□□ 1.58
FAM3A-207ENST00000416319 RLBP1P12271 317 aa24.93■■□□□ 1.58
FAM3A-207ENST00000416319 DDX46Q7L014 1031 aaKnown RBP24.93■■□□□ 1.58
FAM3A-207ENST00000416319 TTLL11Q8NHH1 800 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms