RNA–Protein interactions for RNA: ENST00000416239.1

CTTNBP2-203, Transcript of cortactin binding protein 2, humanhuman

TSL 3

Gene CTTNBP2, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-203ENST00000416239 ITGB2P05107 769 aa9.54□□□□□ -0.88
CTTNBP2-203ENST00000416239 HOXB4P17483 251 aaPredicted RBP9.54□□□□□ -0.88
CTTNBP2-203ENST00000416239 RASA1P20936 1047 aa9.54□□□□□ -0.88
CTTNBP2-203ENST00000416239 COL8A1P27658 744 aa9.54□□□□□ -0.88
CTTNBP2-203ENST00000416239 ALYREFQ86V81 257 aaKnown RBP9.54□□□□□ -0.88
CTTNBP2-203ENST00000416239 TFIP11Q9UBB9 837 aaKnown RBP9.54□□□□□ -0.88
CTTNBP2-203ENST00000416239 FGD5Q6ZNL6 1462 aa9.53□□□□□ -0.88
CTTNBP2-203ENST00000416239 KRBA1A5PL33 1030 aa9.53□□□□□ -0.88
CTTNBP2-203ENST00000416239 PPP1R12BO60237 982 aaPredicted RBP9.53□□□□□ -0.88
CTTNBP2-203ENST00000416239 DGKGP49619 791 aa9.53□□□□□ -0.88
CTTNBP2-203ENST00000416239 SIX5Q8N196 739 aa9.53□□□□□ -0.88
CTTNBP2-203ENST00000416239 M0R2N6 131 aa9.52□□□□□ -0.89
CTTNBP2-203ENST00000416239 SYT9Q86SS6 491 aa9.52□□□□□ -0.89
CTTNBP2-203ENST00000416239 FNBP4Q8N3X1 1017 aaPredicted RBP9.52□□□□□ -0.89
CTTNBP2-203ENST00000416239 PHACTR1Q9C0D0 580 aa9.52□□□□□ -0.89
CTTNBP2-203ENST00000416239 NOP53Q9NZM5 478 aaKnown RBP9.52□□□□□ -0.89
CTTNBP2-203ENST00000416239 ABCA10Q8WWZ4 1543 aa9.51□□□□□ -0.89
CTTNBP2-203ENST00000416239 CASKIN1Q8WXD9 1431 aa9.51□□□□□ -0.89
CTTNBP2-203ENST00000416239 PROCP04070 461 aa9.51□□□□□ -0.89
CTTNBP2-203ENST00000416239 C1orf53Q5VUE5 145 aa9.51□□□□□ -0.89
CTTNBP2-203ENST00000416239 HSH2DQ96JZ2 352 aa9.51□□□□□ -0.89
CTTNBP2-203ENST00000416239 CALR3Q96L12 384 aaKnown RBP9.51□□□□□ -0.89
CTTNBP2-203ENST00000416239 YTHDC1Q96MU7 727 aaKnown RBP9.51□□□□□ -0.89
CTTNBP2-203ENST00000416239 MAFBQ9Y5Q3 323 aaPredicted RBP9.51□□□□□ -0.89
CTTNBP2-203ENST00000416239 CCER2I3L3R5 266 aa9.5□□□□□ -0.89
CTTNBP2-203ENST00000416239 SFSWAPQ12872 951 aaKnown RBP9.5□□□□□ -0.89
CTTNBP2-203ENST00000416239 LARP1Q6PKG0 1096 aaKnown RBP9.5□□□□□ -0.89
CTTNBP2-203ENST00000416239 CHMP7Q8WUX9 453 aaPredicted RBP9.5□□□□□ -0.89
CTTNBP2-203ENST00000416239 CEP63Q96MT8 703 aa9.5□□□□□ -0.89
CTTNBP2-203ENST00000416239 ANKIB1Q9P2G1 1089 aa9.5□□□□□ -0.89
CTTNBP2-203ENST00000416239 EFCAB5A4FU69 1503 aa9.5□□□□□ -0.89
CTTNBP2-203ENST00000416239 CFAP43Q8NDM7 1665 aa9.49□□□□□ -0.89
CTTNBP2-203ENST00000416239 FYCO1Q9BQS8 1478 aa9.49□□□□□ -0.89
CTTNBP2-203ENST00000416239 ALAS2P22557 587 aa9.49□□□□□ -0.89
CTTNBP2-203ENST00000416239 HIRAP54198 1017 aaPredicted RBP9.49□□□□□ -0.89
CTTNBP2-203ENST00000416239 SEC13P55735 322 aa9.49□□□□□ -0.89
CTTNBP2-203ENST00000416239 C7orf43Q8WVR3 580 aa9.49□□□□□ -0.89
CTTNBP2-203ENST00000416239 ELOA3CA0A087WX78 387 aaPredicted RBP9.48□□□□□ -0.89
CTTNBP2-203ENST00000416239 LOC100996750A0A140TA64 210 aa9.48□□□□□ -0.89
CTTNBP2-203ENST00000416239 ELOA3DA6NLF2 546 aaPredicted RBP9.48□□□□□ -0.89
CTTNBP2-203ENST00000416239 ELOA3BQ3SY89 546 aa9.48□□□□□ -0.89
CTTNBP2-203ENST00000416239 ELOA3Q8NG57 546 aa9.48□□□□□ -0.89
CTTNBP2-203ENST00000416239 SCG3Q8WXD2 468 aaKnown RBP9.48□□□□□ -0.89
CTTNBP2-203ENST00000416239 NGLY1Q96IV0 654 aa9.48□□□□□ -0.89
CTTNBP2-203ENST00000416239 SLC30A3Q99726 388 aa9.48□□□□□ -0.89
CTTNBP2-203ENST00000416239 HINFPQ9BQA5 517 aa9.48□□□□□ -0.89
CTTNBP2-203ENST00000416239 KRTAP4-6Q9BYQ5 205 aa9.48□□□□□ -0.89
CTTNBP2-203ENST00000416239 BRD7Q9NPI1 651 aa9.48□□□□□ -0.89
CTTNBP2-203ENST00000416239 DKK1O94907 266 aa9.47□□□□□ -0.89
CTTNBP2-203ENST00000416239 SPEM2Q0P670 501 aa9.47□□□□□ -0.89
CTTNBP2-203ENST00000416239 RAB44Q7Z6P3 723 aaPredicted RBP9.47□□□□□ -0.89
CTTNBP2-203ENST00000416239 PPP1R12CQ9BZL4 782 aa9.47□□□□□ -0.89
CTTNBP2-203ENST00000416239 ATAD2Q6PL18 1390 aa9.47□□□□□ -0.89
CTTNBP2-203ENST00000416239 C21orf2O43822 256 aa9.46□□□□□ -0.9
CTTNBP2-203ENST00000416239 ALDH16A1Q8IZ83 802 aa9.46□□□□□ -0.9
CTTNBP2-203ENST00000416239 ZNF280CQ8ND82 737 aa9.46□□□□□ -0.9
CTTNBP2-203ENST00000416239 SUSD3Q96L08 255 aa9.46□□□□□ -0.9
CTTNBP2-203ENST00000416239 WDR97A6NE52 1622 aa9.45□□□□□ -0.9
CTTNBP2-203ENST00000416239 SIN3BO75182 1162 aa9.45□□□□□ -0.9
CTTNBP2-203ENST00000416239 POTEAQ6S8J7 498 aa9.45□□□□□ -0.9
CTTNBP2-203ENST00000416239 A6NJR5 290 aa9.44□□□□□ -0.9
CTTNBP2-203ENST00000416239 LGR5O75473 907 aa9.44□□□□□ -0.9
CTTNBP2-203ENST00000416239 BAG6P46379 1132 aa9.44□□□□□ -0.9
CTTNBP2-203ENST00000416239 TYRO3Q06418 890 aa9.44□□□□□ -0.9
CTTNBP2-203ENST00000416239 CRTC2Q53ET0 693 aaPredicted RBP9.44□□□□□ -0.9
CTTNBP2-203ENST00000416239 C2orf49Q9BVC5 232 aaPredicted RBP9.44□□□□□ -0.9
CTTNBP2-203ENST00000416239 PLVAPQ9BX97 442 aa9.44□□□□□ -0.9
CTTNBP2-203ENST00000416239 KCNH4Q9UQ05 1017 aa9.44□□□□□ -0.9
CTTNBP2-203ENST00000416239 HFM1A2PYH4 1435 aa9.44□□□□□ -0.9
CTTNBP2-203ENST00000416239 SNAPC4Q5SXM2 1469 aa9.44□□□□□ -0.9
CTTNBP2-203ENST00000416239 DNMBPQ6XZF7 1577 aa9.44□□□□□ -0.9
CTTNBP2-203ENST00000416239 CC2D2AQ9P2K1 1620 aa9.44□□□□□ -0.9
CTTNBP2-203ENST00000416239 PCF11O94913 1555 aaKnown RBP9.43□□□□□ -0.9
CTTNBP2-203ENST00000416239 ARHGEF11O15085 1522 aa9.43□□□□□ -0.9
CTTNBP2-203ENST00000416239 KDM5BQ9UGL1 1544 aa9.43□□□□□ -0.9
CTTNBP2-203ENST00000416239 C1QTNF9BB2RNN3 333 aa9.43□□□□□ -0.9
CTTNBP2-203ENST00000416239 ADAM23O75077 832 aa9.43□□□□□ -0.9
CTTNBP2-203ENST00000416239 LMOD1P29536 600 aaPredicted RBP9.43□□□□□ -0.9
CTTNBP2-203ENST00000416239 RANGAP1P46060 587 aaPredicted RBP9.43□□□□□ -0.9
CTTNBP2-203ENST00000416239 DPYDQ12882 1025 aa9.43□□□□□ -0.9
CTTNBP2-203ENST00000416239 GAS2L2Q8NHY3 880 aa9.43□□□□□ -0.9
CTTNBP2-203ENST00000416239 TRIM11Q96F44 468 aa9.43□□□□□ -0.9
CTTNBP2-203ENST00000416239 FANCD2Q9BXW9 1451 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 USP17L15C9J2P7 530 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 USP17L10C9JJH3 530 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 USP17L13C9JLJ4 530 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 USP17L12C9JPN9 530 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 USP17L11C9JVI0 530 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 USP17L21D6R901 530 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 USP17L18D6R9N7 530 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 USP17L22D6RA61 530 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 USP17L17D6RBQ6 530 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 USP17L19D6RCP7 530 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 USP17L20D6RJB6 530 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 USP17L24Q0WX57 530 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 PTK7Q13308 1070 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 HIF1AQ16665 826 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 STAG2Q8N3U4 1231 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 VRTNQ9H8Y1 702 aa9.42□□□□□ -0.9
CTTNBP2-203ENST00000416239 FMN1Q68DA7 1419 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms