RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 NBPF10Q6P3W6 841 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-206ENST00000416004 NBPF15Q8N660 670 aa11.69□□□□□ -0.54
CHRNA1-206ENST00000416004 MAP3K15Q6ZN16 1313 aa11.69□□□□□ -0.54
CHRNA1-206ENST00000416004 HOXB7P09629 217 aa11.68□□□□□ -0.54
CHRNA1-206ENST00000416004 HDGFL1Q5TGJ6 251 aa11.68□□□□□ -0.54
CHRNA1-206ENST00000416004 CCDC30Q5VVM6 783 aa11.68□□□□□ -0.54
CHRNA1-206ENST00000416004 PRR5LQ6MZQ0 368 aa11.68□□□□□ -0.54
CHRNA1-206ENST00000416004 FTSJ3Q8IY81 847 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-206ENST00000416004 TMEM57Q8N5G2 664 aa11.68□□□□□ -0.54
CHRNA1-206ENST00000416004 ARHGAP45Q92619 1136 aa11.68□□□□□ -0.54
CHRNA1-206ENST00000416004 HSP90AB3PQ58FF7 597 aa11.68□□□□□ -0.54
CHRNA1-206ENST00000416004 CNKSR1Q969H4 720 aa11.68□□□□□ -0.54
CHRNA1-206ENST00000416004 GPBP1L1Q9HC44 474 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-206ENST00000416004 FAM177BA6PVY3 158 aa11.67□□□□□ -0.54
CHRNA1-206ENST00000416004 KCNA3P22001 575 aa11.67□□□□□ -0.54
CHRNA1-206ENST00000416004 MVPQ14764 893 aaKnown RBP11.67□□□□□ -0.54
CHRNA1-206ENST00000416004 PPP1R42Q7Z4L9 355 aa11.67□□□□□ -0.54
CHRNA1-206ENST00000416004 CCDC136Q96JN2 1154 aa11.67□□□□□ -0.54
CHRNA1-206ENST00000416004 ZBTB3Q9H5J0 574 aa11.67□□□□□ -0.54
CHRNA1-206ENST00000416004 ABCC4O15439 1325 aa11.67□□□□□ -0.54
CHRNA1-206ENST00000416004 SOGA3Q5TF21 947 aa11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 MASTLQ96GX5 879 aa11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 STK31Q9BXU1 1019 aa11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 CHPF2Q9P2E5 772 aa11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 RBM19Q9Y4C8 960 aaKnown RBP11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 ATP10DQ9P241 1426 aa11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 CACNA1SQ13698 1873 aa11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 ANKRD31Q8N7Z5 1873 aa11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 ANXA1P04083 346 aa11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 MS4A1P11836 297 aa11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 PARP10Q53GL7 1025 aa11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 ITPRIPQ8IWB1 547 aa11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 API5Q9BZZ5 524 aaKnown RBP11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 DDX21Q9NR30 783 aaKnown RBP eCLIP11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 DBF4Q9UBU7 674 aaPredicted RBP11.66□□□□□ -0.54
CHRNA1-206ENST00000416004 AIMP1Q12904 312 aaKnown RBP11.65□□□□□ -0.54
CHRNA1-206ENST00000416004 FLIIQ13045 1269 aa11.65□□□□□ -0.54
CHRNA1-206ENST00000416004 PROSER3Q2NL68 480 aa11.65□□□□□ -0.54
CHRNA1-206ENST00000416004 STYK1Q6J9G0 422 aa11.65□□□□□ -0.54
CHRNA1-206ENST00000416004 GIGYF2Q6Y7W6 1299 aaKnown RBP11.65□□□□□ -0.54
CHRNA1-206ENST00000416004 F6X3S4 739 aa11.64□□□□□ -0.55
CHRNA1-206ENST00000416004 HLFQ16534 295 aa11.64□□□□□ -0.55
CHRNA1-206ENST00000416004 TTLL7Q6ZT98 887 aa11.64□□□□□ -0.55
CHRNA1-206ENST00000416004 CCDC24Q8N4L8 307 aa11.64□□□□□ -0.55
CHRNA1-206ENST00000416004 TMX4Q9H1E5 349 aaPredicted RBP11.64□□□□□ -0.55
CHRNA1-206ENST00000416004 PHAXQ9H814 394 aaKnown RBP11.64□□□□□ -0.55
CHRNA1-206ENST00000416004 HYPKQ9NX55 129 aa11.64□□□□□ -0.55
CHRNA1-206ENST00000416004 PTPRCP08575 1304 aa11.64□□□□□ -0.55
CHRNA1-206ENST00000416004 NPR1P16066 1061 aa11.63□□□□□ -0.55
CHRNA1-206ENST00000416004 ALDH1B1P30837 517 aa11.63□□□□□ -0.55
CHRNA1-206ENST00000416004 ZNF526Q8TF50 670 aaPredicted RBP11.63□□□□□ -0.55
CHRNA1-206ENST00000416004 ANKRD36CQ5JPF3 1778 aa11.63□□□□□ -0.55
CHRNA1-206ENST00000416004 ARFGEF2Q9Y6D5 1785 aa11.63□□□□□ -0.55
CHRNA1-206ENST00000416004 GPTP24298 496 aa11.63□□□□□ -0.55
CHRNA1-206ENST00000416004 PDIA6Q15084 440 aa11.63□□□□□ -0.55
CHRNA1-206ENST00000416004 C9orf131Q5VYM1 1079 aa11.63□□□□□ -0.55
CHRNA1-206ENST00000416004 COPS6Q7L5N1 327 aa11.63□□□□□ -0.55
CHRNA1-206ENST00000416004 RPGRQ92834 1020 aaKnown RBP11.63□□□□□ -0.55
CHRNA1-206ENST00000416004 RNF181Q9P0P0 153 aa11.63□□□□□ -0.55
CHRNA1-206ENST00000416004 IBTKQ9P2D0 1353 aaPredicted RBP11.63□□□□□ -0.55
CHRNA1-206ENST00000416004 SRGNP10124 158 aa11.62□□□□□ -0.55
CHRNA1-206ENST00000416004 XAGE3Q8WTP9 111 aa11.62□□□□□ -0.55
CHRNA1-206ENST00000416004 DDX19BQ9UMR2 479 aa11.62□□□□□ -0.55
CHRNA1-206ENST00000416004 PCDHB15Q9Y5E8 787 aa11.62□□□□□ -0.55
CHRNA1-206ENST00000416004 KDM2BQ8NHM5 1336 aa11.62□□□□□ -0.55
CHRNA1-206ENST00000416004 COL11A2P13942 1736 aaPredicted RBP11.62□□□□□ -0.55
CHRNA1-206ENST00000416004 CCDC88AQ3V6T2 1871 aa11.62□□□□□ -0.55
CHRNA1-206ENST00000416004 DDX58O95786 925 aaKnown RBP11.61□□□□□ -0.55
CHRNA1-206ENST00000416004 FKBP5Q13451 457 aaPredicted RBP11.61□□□□□ -0.55
CHRNA1-206ENST00000416004 C16orf71Q8IYS4 520 aaPredicted RBP11.61□□□□□ -0.55
CHRNA1-206ENST00000416004 UTP14AQ9BVJ6 771 aaKnown RBP11.61□□□□□ -0.55
CHRNA1-206ENST00000416004 ZNF219Q9P2Y4 722 aaPredicted RBP11.61□□□□□ -0.55
CHRNA1-206ENST00000416004 SBF1O95248 1867 aa11.61□□□□□ -0.55
CHRNA1-206ENST00000416004 ADCY9O60503 1353 aa11.61□□□□□ -0.55
CHRNA1-206ENST00000416004 ZC3H4Q9UPT8 1303 aaKnown RBP11.61□□□□□ -0.55
CHRNA1-206ENST00000416004 ZBTB7BO15156 539 aaPredicted RBP11.61□□□□□ -0.55
CHRNA1-206ENST00000416004 C21orf2O43822 256 aa11.61□□□□□ -0.55
CHRNA1-206ENST00000416004 LMNB1P20700 586 aa11.61□□□□□ -0.55
CHRNA1-206ENST00000416004 INTS3Q68E01 1043 aaKnown RBP11.61□□□□□ -0.55
CHRNA1-206ENST00000416004 NLRP3Q96P20 1036 aa11.61□□□□□ -0.55
CHRNA1-206ENST00000416004 ZBTB40Q9NUA8 1239 aa11.61□□□□□ -0.55
CHRNA1-206ENST00000416004 HSP90B1P14625 803 aaKnown RBP11.6□□□□□ -0.55
CHRNA1-206ENST00000416004 PRPF40BQ6NWY9 871 aaKnown RBP11.6□□□□□ -0.55
CHRNA1-206ENST00000416004 ANKRD13DQ6ZTN6 518 aa11.6□□□□□ -0.55
CHRNA1-206ENST00000416004 LRP10Q7Z4F1 713 aa11.6□□□□□ -0.55
CHRNA1-206ENST00000416004 RIC3Q7Z5B4 369 aa11.6□□□□□ -0.55
CHRNA1-206ENST00000416004 ZNF34Q8IZ26 560 aa11.6□□□□□ -0.55
CHRNA1-206ENST00000416004 PLBD2Q8NHP8 589 aa11.6□□□□□ -0.55
CHRNA1-206ENST00000416004 RBM17Q96I25 401 aaKnown RBP11.6□□□□□ -0.55
CHRNA1-206ENST00000416004 GOLGB1Q14789 3259 aaKnown RBP11.6□□□□□ -0.55
CHRNA1-206ENST00000416004 UTRNP46939 3433 aa11.6□□□□□ -0.55
CHRNA1-206ENST00000416004 IGHDP01880 384 aa11.59□□□□□ -0.55
CHRNA1-206ENST00000416004 CCDC93Q567U6 631 aa11.59□□□□□ -0.55
CHRNA1-206ENST00000416004 SLC4A10Q6U841 1118 aa11.59□□□□□ -0.55
CHRNA1-206ENST00000416004 NUTM1Q86Y26 1132 aa11.59□□□□□ -0.55
CHRNA1-206ENST00000416004 TAOK3Q9H2K8 898 aa11.59□□□□□ -0.55
CHRNA1-206ENST00000416004 C1QTNF8P60827 252 aa11.59□□□□□ -0.55
CHRNA1-206ENST00000416004 TCIRG1Q13488 830 aa11.59□□□□□ -0.55
CHRNA1-206ENST00000416004 ERFEQ4G0M1 354 aa11.59□□□□□ -0.55
CHRNA1-206ENST00000416004 GRIPAP1Q4V328 841 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms