RNA–Protein interactions for RNA: ENST00000415889.2

LINC01260-201, Transcript of long intergenic non-protein coding RNA 1260, humanhuman

TSL 5 BASIC

Gene LINC01260, Length 1,416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01260-201ENST00000415889 DDX21Q9NR30 783 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC01260-201ENST00000415889 LAS1LQ9Y4W2 734 aaKnown RBP11.03□□□□□ -0.64
LINC01260-201ENST00000415889 DLG5Q8TDM6 1919 aa11.03□□□□□ -0.64
LINC01260-201ENST00000415889 NTSR2O95665 410 aa11.02□□□□□ -0.64
LINC01260-201ENST00000415889 HSPA1AP0DMV8 641 aaKnown RBP11.02□□□□□ -0.64
LINC01260-201ENST00000415889 HSPA1BP0DMV9 641 aaKnown RBP11.02□□□□□ -0.64
LINC01260-201ENST00000415889 ZEB1P37275 1124 aaPredicted RBP11.02□□□□□ -0.64
LINC01260-201ENST00000415889 IARSP41252 1262 aaKnown RBP11.02□□□□□ -0.64
LINC01260-201ENST00000415889 PDIA6Q15084 440 aa11.02□□□□□ -0.64
LINC01260-201ENST00000415889 L3MBTL3Q96JM7 780 aaPredicted RBP11.02□□□□□ -0.64
LINC01260-201ENST00000415889 CFAP44Q96MT7 982 aa11.02□□□□□ -0.64
LINC01260-201ENST00000415889 ADAMTS8Q9UP79 889 aa11.02□□□□□ -0.64
LINC01260-201ENST00000415889 UBN2Q6ZU65 1347 aa11.02□□□□□ -0.65
LINC01260-201ENST00000415889 ABCC12Q96J65 1359 aa11.02□□□□□ -0.65
LINC01260-201ENST00000415889 TIAM2Q8IVF5 1701 aa11.02□□□□□ -0.65
LINC01260-201ENST00000415889 DDNO94850 711 aaPredicted RBP11.01□□□□□ -0.65
LINC01260-201ENST00000415889 SLC10A5Q5PT55 438 aa11.01□□□□□ -0.65
LINC01260-201ENST00000415889 HDGFL1Q5TGJ6 251 aa11.01□□□□□ -0.65
LINC01260-201ENST00000415889 CHADLQ6NUI6 762 aa11.01□□□□□ -0.65
LINC01260-201ENST00000415889 COPS6Q7L5N1 327 aa11.01□□□□□ -0.65
LINC01260-201ENST00000415889 LRP10Q7Z4F1 713 aa11.01□□□□□ -0.65
LINC01260-201ENST00000415889 SYNE4Q8N205 404 aa11.01□□□□□ -0.65
LINC01260-201ENST00000415889 ZNF277Q9NRM2 450 aaPredicted RBP11.01□□□□□ -0.65
LINC01260-201ENST00000415889 DBF4Q9UBU7 674 aaPredicted RBP11.01□□□□□ -0.65
LINC01260-201ENST00000415889 TRIM35Q9UPQ4 493 aa11.01□□□□□ -0.65
LINC01260-201ENST00000415889 PCNTO95613 3336 aa11.01□□□□□ -0.65
LINC01260-201ENST00000415889 ARFGEF2Q9Y6D5 1785 aa11.01□□□□□ -0.65
LINC01260-201ENST00000415889 FER1L6Q2WGJ9 1857 aa11.01□□□□□ -0.65
LINC01260-201ENST00000415889 PPEF1O14829 653 aaPredicted RBP11.01□□□□□ -0.65
LINC01260-201ENST00000415889 EIF6P56537 245 aaKnown RBP11.01□□□□□ -0.65
LINC01260-201ENST00000415889 AIMP1Q12904 312 aaKnown RBP11.01□□□□□ -0.65
LINC01260-201ENST00000415889 PNMA8AQ86V59 439 aaPredicted RBP11.01□□□□□ -0.65
LINC01260-201ENST00000415889 SUPT20HQ8NEM7 779 aa11.01□□□□□ -0.65
LINC01260-201ENST00000415889 XAGE3Q8WTP9 111 aa11.01□□□□□ -0.65
LINC01260-201ENST00000415889 VPS33BQ9H267 617 aa11.01□□□□□ -0.65
LINC01260-201ENST00000415889 HYPKQ9NX55 129 aa11.01□□□□□ -0.65
LINC01260-201ENST00000415889 SLX4Q8IY92 1834 aa11□□□□□ -0.65
LINC01260-201ENST00000415889 POTECB2RU33 542 aa11□□□□□ -0.65
LINC01260-201ENST00000415889 FZD9O00144 591 aa11□□□□□ -0.65
LINC01260-201ENST00000415889 BBOX1O75936 387 aa11□□□□□ -0.65
LINC01260-201ENST00000415889 HSP90B1P14625 803 aaKnown RBP11□□□□□ -0.65
LINC01260-201ENST00000415889 GNAI1P63096 354 aa11□□□□□ -0.65
LINC01260-201ENST00000415889 TCIRG1Q13488 830 aa11□□□□□ -0.65
LINC01260-201ENST00000415889 LDHDQ86WU2 507 aa11□□□□□ -0.65
LINC01260-201ENST00000415889 GPC2Q8N158 579 aa11□□□□□ -0.65
LINC01260-201ENST00000415889 TRMT112Q9UI30 125 aaKnown RBP11□□□□□ -0.65
LINC01260-201ENST00000415889 HACL1Q9UJ83 578 aa11□□□□□ -0.65
LINC01260-201ENST00000415889 SH3TC1Q8TE82 1336 aa10.99□□□□□ -0.65
LINC01260-201ENST00000415889 ANXA1P04083 346 aa10.99□□□□□ -0.65
LINC01260-201ENST00000415889 LMOD1P29536 600 aaPredicted RBP10.99□□□□□ -0.65
LINC01260-201ENST00000415889 PROSER3Q2NL68 480 aa10.99□□□□□ -0.65
LINC01260-201ENST00000415889 ANKRD13DQ6ZTN6 518 aa10.99□□□□□ -0.65
LINC01260-201ENST00000415889 DDX46Q7L014 1031 aaKnown RBP10.99□□□□□ -0.65
LINC01260-201ENST00000415889 TMC4Q7Z404 712 aa10.99□□□□□ -0.65
LINC01260-201ENST00000415889 NLRP10Q86W26 655 aa10.99□□□□□ -0.65
LINC01260-201ENST00000415889 LARGE2Q8N3Y3 721 aa10.99□□□□□ -0.65
LINC01260-201ENST00000415889 PLBD2Q8NHP8 589 aa10.99□□□□□ -0.65
LINC01260-201ENST00000415889 NECTIN2Q92692 538 aa10.99□□□□□ -0.65
LINC01260-201ENST00000415889 IFT57Q9NWB7 429 aa10.99□□□□□ -0.65
LINC01260-201ENST00000415889 CHPF2Q9P2E5 772 aa10.99□□□□□ -0.65
LINC01260-201ENST00000415889 DUSP27Q5VZP5 1158 aa10.98□□□□□ -0.65
LINC01260-201ENST00000415889 OLFM4Q6UX06 510 aa10.98□□□□□ -0.65
LINC01260-201ENST00000415889 TAF1DQ9H5J8 278 aaPredicted RBP10.98□□□□□ -0.65
LINC01260-201ENST00000415889 CREBZFQ9NS37 354 aa10.98□□□□□ -0.65
LINC01260-201ENST00000415889 ATP6V0A2Q9Y487 856 aa10.98□□□□□ -0.65
LINC01260-201ENST00000415889 APAF1O14727 1248 aa10.97□□□□□ -0.65
LINC01260-201ENST00000415889 EPHX2P34913 555 aa10.97□□□□□ -0.65
LINC01260-201ENST00000415889 GOLGA2Q08379 1002 aa10.97□□□□□ -0.65
LINC01260-201ENST00000415889 NIM1KQ8IY84 436 aa10.97□□□□□ -0.65
LINC01260-201ENST00000415889 MBIPQ9NS73 344 aa10.97□□□□□ -0.65
LINC01260-201ENST00000415889 DICER1Q9UPY3 1922 aaKnown RBP10.97□□□□□ -0.65
LINC01260-201ENST00000415889 ZNF541Q9H0D2 1346 aa10.97□□□□□ -0.65
LINC01260-201ENST00000415889 NUP98P52948 1817 aa10.96□□□□□ -0.65
LINC01260-201ENST00000415889 PPIP5K2O43314 1243 aa10.96□□□□□ -0.65
LINC01260-201ENST00000415889 EAPPQ56P03 285 aaPredicted RBP10.96□□□□□ -0.65
LINC01260-201ENST00000415889 DPP8Q6V1X1 898 aaPredicted RBP10.96□□□□□ -0.65
LINC01260-201ENST00000415889 SP8Q8IXZ3 490 aa10.96□□□□□ -0.65
LINC01260-201ENST00000415889 CLEC11AQ9Y240 323 aa10.96□□□□□ -0.65
LINC01260-201ENST00000415889 ABCC4O15439 1325 aa10.96□□□□□ -0.65
LINC01260-201ENST00000415889 TCERG1O14776 1098 aaKnown RBP10.95□□□□□ -0.66
LINC01260-201ENST00000415889 DDX58O95786 925 aaKnown RBP10.95□□□□□ -0.66
LINC01260-201ENST00000415889 ZNF853P0CG23 659 aa10.95□□□□□ -0.66
LINC01260-201ENST00000415889 GRAPQ13588 217 aa10.95□□□□□ -0.66
LINC01260-201ENST00000415889 KRT24Q2M2I5 525 aa10.95□□□□□ -0.66
LINC01260-201ENST00000415889 RIC3Q7Z5B4 369 aa10.95□□□□□ -0.66
LINC01260-201ENST00000415889 GRAPLQ8TC17 118 aaPredicted RBP10.95□□□□□ -0.66
LINC01260-201ENST00000415889 SNED1Q8TER0 1413 aa10.95□□□□□ -0.66
LINC01260-201ENST00000415889 GJA3Q9Y6H8 435 aa10.95□□□□□ -0.66
LINC01260-201ENST00000415889 HCLS1P14317 486 aaPredicted RBP10.94□□□□□ -0.66
LINC01260-201ENST00000415889 TRIM28Q13263 835 aaKnown RBP10.94□□□□□ -0.66
LINC01260-201ENST00000415889 CCDC30Q5VVM6 783 aa10.94□□□□□ -0.66
LINC01260-201ENST00000415889 C3orf67Q6ZVT6 689 aa10.94□□□□□ -0.66
LINC01260-201ENST00000415889 MPNDQ8N594 471 aa10.94□□□□□ -0.66
LINC01260-201ENST00000415889 ISCA1Q9BUE6 129 aa10.94□□□□□ -0.66
LINC01260-201ENST00000415889 RTFDC1Q9BY42 306 aaPredicted RBP10.94□□□□□ -0.66
LINC01260-201ENST00000415889 CCDC88AQ3V6T2 1871 aa10.94□□□□□ -0.66
LINC01260-201ENST00000415889 SCN4AP35499 1836 aa10.94□□□□□ -0.66
LINC01260-201ENST00000415889 SF3B3Q15393 1217 aaKnown RBP10.93□□□□□ -0.66
LINC01260-201ENST00000415889 ZNRF3Q9ULT6 936 aa10.93□□□□□ -0.66
LINC01260-201ENST00000415889 CACNA1SQ13698 1873 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms