RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 ZNF232Q9UNY5 417 aa9.31□□□□□ -0.92
EPHA4-204ENST00000415749 IQSEC2Q5JU85 1478 aa9.31□□□□□ -0.92
EPHA4-204ENST00000415749 LTBP4Q8N2S1 1624 aa9.31□□□□□ -0.92
EPHA4-204ENST00000415749 ARHGEF12Q9NZN5 1544 aa9.31□□□□□ -0.92
EPHA4-204ENST00000415749 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
EPHA4-204ENST00000415749 WDR44Q5JSH3 913 aa9.3□□□□□ -0.92
EPHA4-204ENST00000415749 C2orf49Q9BVC5 232 aaPredicted RBP9.3□□□□□ -0.92
EPHA4-204ENST00000415749 SENP2Q9HC62 589 aa9.3□□□□□ -0.92
EPHA4-204ENST00000415749 GNEQ9Y223 722 aaKnown RBP9.3□□□□□ -0.92
EPHA4-204ENST00000415749 USP3Q9Y6I4 520 aa9.3□□□□□ -0.92
EPHA4-204ENST00000415749 ZMYM4Q5VZL5 1548 aa9.3□□□□□ -0.92
EPHA4-204ENST00000415749 NOS2P35228 1153 aa9.29□□□□□ -0.92
EPHA4-204ENST00000415749 HIRAP54198 1017 aaPredicted RBP9.29□□□□□ -0.92
EPHA4-204ENST00000415749 EFCAB2Q5VUJ9 269 aa9.29□□□□□ -0.92
EPHA4-204ENST00000415749 Q6ZNB5 142 aa9.29□□□□□ -0.92
EPHA4-204ENST00000415749 KIFC2Q96AC6 838 aa9.29□□□□□ -0.92
EPHA4-204ENST00000415749 MKNK1Q9BUB5 465 aa9.29□□□□□ -0.92
EPHA4-204ENST00000415749 HECW1Q76N89 1606 aa9.29□□□□□ -0.92
EPHA4-204ENST00000415749 PLA2G4AP47712 749 aa9.28□□□□□ -0.92
EPHA4-204ENST00000415749 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.28□□□□□ -0.92
EPHA4-204ENST00000415749 NBPF1Q3BBV0 1214 aa9.28□□□□□ -0.92
EPHA4-204ENST00000415749 C4orf17Q53FE4 359 aa9.28□□□□□ -0.92
EPHA4-204ENST00000415749 POTEAQ6S8J7 498 aa9.28□□□□□ -0.92
EPHA4-204ENST00000415749 PRICKLE2Q7Z3G6 844 aa9.28□□□□□ -0.92
EPHA4-204ENST00000415749 TXNDC2Q86VQ3 553 aa9.28□□□□□ -0.92
EPHA4-204ENST00000415749 L3MBTL2Q969R5 705 aa9.28□□□□□ -0.92
EPHA4-204ENST00000415749 C9orf84Q5VXU9 1444 aa9.28□□□□□ -0.92
EPHA4-204ENST00000415749 NUP153P49790 1475 aaKnown RBP9.28□□□□□ -0.92
EPHA4-204ENST00000415749 PRXQ9BXM0 1461 aa9.28□□□□□ -0.92
EPHA4-204ENST00000415749 RAPGEF6Q8TEU7 1601 aa9.27□□□□□ -0.92
EPHA4-204ENST00000415749 FIGNL2A6NMB9 653 aa9.27□□□□□ -0.93
EPHA4-204ENST00000415749 EML1O00423 815 aa9.27□□□□□ -0.93
EPHA4-204ENST00000415749 MAN1A2O60476 641 aa9.27□□□□□ -0.93
EPHA4-204ENST00000415749 NBPF10Q6P3W6 841 aaKnown RBP9.27□□□□□ -0.93
EPHA4-204ENST00000415749 ZNF295-AS1Q8N0V1 137 aa9.27□□□□□ -0.93
EPHA4-204ENST00000415749 AFAP1Q8N556 730 aa9.27□□□□□ -0.93
EPHA4-204ENST00000415749 ZNF335Q9H4Z2 1342 aaPredicted RBP9.27□□□□□ -0.93
EPHA4-204ENST00000415749 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.26□□□□□ -0.93
EPHA4-204ENST00000415749 CFAP74Q9C0B2 1584 aa9.26□□□□□ -0.93
EPHA4-204ENST00000415749 PLCH2O75038 1416 aa9.26□□□□□ -0.93
EPHA4-204ENST00000415749 TRAPPC8Q9Y2L5 1435 aa9.26□□□□□ -0.93
EPHA4-204ENST00000415749 HSPA1LP34931 641 aa9.26□□□□□ -0.93
EPHA4-204ENST00000415749 POU4F2Q12837 409 aa9.26□□□□□ -0.93
EPHA4-204ENST00000415749 ZDHHC1Q8WTX9 485 aa9.26□□□□□ -0.93
EPHA4-204ENST00000415749 USP35Q9P2H5 1018 aa9.26□□□□□ -0.93
EPHA4-204ENST00000415749 TATP17735 454 aaPredicted RBP9.25□□□□□ -0.93
EPHA4-204ENST00000415749 C1orf53Q5VUE5 145 aa9.25□□□□□ -0.93
EPHA4-204ENST00000415749 AIDAQ96BJ3 306 aa9.25□□□□□ -0.93
EPHA4-204ENST00000415749 TIMMDC1Q9NPL8 285 aa9.25□□□□□ -0.93
EPHA4-204ENST00000415749 ZDHHC3Q9NYG2 299 aa9.25□□□□□ -0.93
EPHA4-204ENST00000415749 EGFL7Q9UHF1 273 aa9.25□□□□□ -0.93
EPHA4-204ENST00000415749 PARP3Q9Y6F1 533 aa9.25□□□□□ -0.93
EPHA4-204ENST00000415749 NCOA1Q15788 1441 aa9.24□□□□□ -0.93
EPHA4-204ENST00000415749 PHKA2P46019 1235 aa9.24□□□□□ -0.93
EPHA4-204ENST00000415749 PIP4K2BP78356 416 aa9.24□□□□□ -0.93
EPHA4-204ENST00000415749 DNMT3LQ9UJW3 386 aa9.24□□□□□ -0.93
EPHA4-204ENST00000415749 A0A1B0GTH6 734 aa9.23□□□□□ -0.93
EPHA4-204ENST00000415749 UNCXA6NJT0 531 aa9.23□□□□□ -0.93
EPHA4-204ENST00000415749 ABL1P00519 1130 aa9.23□□□□□ -0.93
EPHA4-204ENST00000415749 RHOQP17081 205 aa9.23□□□□□ -0.93
EPHA4-204ENST00000415749 C16orf46Q6P387 395 aa9.23□□□□□ -0.93
EPHA4-204ENST00000415749 ALDH16A1Q8IZ83 802 aa9.23□□□□□ -0.93
EPHA4-204ENST00000415749 NGLY1Q96IV0 654 aa9.23□□□□□ -0.93
EPHA4-204ENST00000415749 PHACTR1Q9C0D0 580 aa9.23□□□□□ -0.93
EPHA4-204ENST00000415749 DACH1Q9UI36 760 aa9.23□□□□□ -0.93
EPHA4-204ENST00000415749 HCN4Q9Y3Q4 1203 aa9.23□□□□□ -0.93
EPHA4-204ENST00000415749 GPC6Q9Y625 555 aaPredicted RBP9.23□□□□□ -0.93
EPHA4-204ENST00000415749 TOM1O60784 492 aa9.22□□□□□ -0.93
EPHA4-204ENST00000415749 SCNN1AP37088 669 aa9.22□□□□□ -0.93
EPHA4-204ENST00000415749 SF3B2Q13435 895 aaKnown RBP9.22□□□□□ -0.93
EPHA4-204ENST00000415749 NAA30Q147X3 362 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-204ENST00000415749 HIF1AQ16665 826 aa9.22□□□□□ -0.93
EPHA4-204ENST00000415749 RTN1Q16799 776 aa9.22□□□□□ -0.93
EPHA4-204ENST00000415749 SH3PXD2AQ5TCZ1 1133 aa9.22□□□□□ -0.93
EPHA4-204ENST00000415749 GTF3C2Q8WUA4 911 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-204ENST00000415749 MYO19Q96H55 970 aa9.22□□□□□ -0.93
EPHA4-204ENST00000415749 TRIM47Q96LD4 638 aa9.22□□□□□ -0.93
EPHA4-204ENST00000415749 SEPT3Q9UH03 358 aa9.22□□□□□ -0.93
EPHA4-204ENST00000415749 SERPINB4P48594 390 aa9.21□□□□□ -0.94
EPHA4-204ENST00000415749 RHPN1Q8TCX5 695 aa9.21□□□□□ -0.94
EPHA4-204ENST00000415749 HELQQ8TDG4 1101 aa9.21□□□□□ -0.94
EPHA4-204ENST00000415749 CAPN12Q6ZSI9 719 aa9.2□□□□□ -0.94
EPHA4-204ENST00000415749 QTRT2Q9H974 415 aaKnown RBP9.2□□□□□ -0.94
EPHA4-204ENST00000415749 GMPR2Q9P2T1 348 aaKnown RBP9.2□□□□□ -0.94
EPHA4-204ENST00000415749 DYRK1BQ9Y463 629 aa9.2□□□□□ -0.94
EPHA4-204ENST00000415749 SAMD9Q5K651 1589 aa9.2□□□□□ -0.94
EPHA4-204ENST00000415749 TXLNAP40222 546 aa9.19□□□□□ -0.94
EPHA4-204ENST00000415749 BICDL1Q6ZP65 573 aa9.19□□□□□ -0.94
EPHA4-204ENST00000415749 CDK11AQ9UQ88 783 aaPredicted RBP9.19□□□□□ -0.94
EPHA4-204ENST00000415749 SOWAHDA6NJG2 315 aa9.18□□□□□ -0.94
EPHA4-204ENST00000415749 C3P01024 1663 aa9.18□□□□□ -0.94
EPHA4-204ENST00000415749 MSX1P28360 303 aa9.18□□□□□ -0.94
EPHA4-204ENST00000415749 FKBP4Q02790 459 aaKnown RBP eCLIP9.18□□□□□ -0.94
EPHA4-204ENST00000415749 ZNF211Q13398 564 aaPredicted RBP9.18□□□□□ -0.94
EPHA4-204ENST00000415749 ZMYM3Q14202 1370 aa9.18□□□□□ -0.94
EPHA4-204ENST00000415749 MED1Q15648 1581 aaPredicted RBP9.18□□□□□ -0.94
EPHA4-204ENST00000415749 C11orf91Q3C1V1 193 aa9.18□□□□□ -0.94
EPHA4-204ENST00000415749 COX20Q5RI15 118 aa9.18□□□□□ -0.94
EPHA4-204ENST00000415749 CAMSAP1Q5T5Y3 1602 aa9.18□□□□□ -0.94
EPHA4-204ENST00000415749 GLYCTKQ8IVS8 523 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms