RNA–Protein interactions for RNA: ENST00000415455.5

MUC4-206, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-206ENST00000415455 TIMM10P62072 90 aa13.22□□□□□ -0.29
MUC4-206ENST00000415455 HELBQ8NG08 1087 aaPredicted RBP13.22□□□□□ -0.29
MUC4-206ENST00000415455 RBM27Q9P2N5 1060 aaKnown RBP13.22□□□□□ -0.29
MUC4-206ENST00000415455 HCLS1P14317 486 aaPredicted RBP13.22□□□□□ -0.29
MUC4-206ENST00000415455 TFCP2Q12800 502 aa13.22□□□□□ -0.29
MUC4-206ENST00000415455 SMIM5Q71RC9 77 aa13.22□□□□□ -0.29
MUC4-206ENST00000415455 VSIG10Q8N0Z9 540 aa13.22□□□□□ -0.29
MUC4-206ENST00000415455 FERMT3Q86UX7 667 aa13.22□□□□□ -0.29
MUC4-206ENST00000415455 VPS37DQ86XT2 251 aa13.22□□□□□ -0.29
MUC4-206ENST00000415455 TOMM22Q9NS69 142 aa13.22□□□□□ -0.29
MUC4-206ENST00000415455 NIP7Q9Y221 180 aaKnown RBP eCLIP13.22□□□□□ -0.29
MUC4-206ENST00000415455 NBPF26B4DH59 902 aa13.21□□□□□ -0.29
MUC4-206ENST00000415455 NBPF14Q5TI25 921 aa13.21□□□□□ -0.29
MUC4-206ENST00000415455 NBPF10Q6P3W6 841 aaKnown RBP13.21□□□□□ -0.29
MUC4-206ENST00000415455 NBPF15Q8N660 670 aa13.21□□□□□ -0.29
MUC4-206ENST00000415455 SSH3Q8TE77 659 aa13.21□□□□□ -0.29
MUC4-206ENST00000415455 CD2BP2O95400 341 aaKnown RBP13.21□□□□□ -0.29
MUC4-206ENST00000415455 CEBPZQ03701 1054 aaKnown RBP13.21□□□□□ -0.29
MUC4-206ENST00000415455 TTC39AQ5SRH9 613 aa13.21□□□□□ -0.29
MUC4-206ENST00000415455 ATG3Q9NT62 314 aa13.21□□□□□ -0.29
MUC4-206ENST00000415455 NCOA3Q9Y6Q9 1424 aa13.21□□□□□ -0.3
MUC4-206ENST00000415455 DDX46Q7L014 1031 aaKnown RBP13.21□□□□□ -0.3
MUC4-206ENST00000415455 HEG1Q9ULI3 1381 aa13.2□□□□□ -0.3
MUC4-206ENST00000415455 ZPR1O75312 459 aa13.2□□□□□ -0.3
MUC4-206ENST00000415455 XRCC6P12956 609 aaKnown RBP eCLIP13.2□□□□□ -0.3
MUC4-206ENST00000415455 PTMSP20962 102 aa13.2□□□□□ -0.3
MUC4-206ENST00000415455 EPHA10Q5JZY3 1008 aa13.2□□□□□ -0.3
MUC4-206ENST00000415455 SYNE4Q8N205 404 aa13.2□□□□□ -0.3
MUC4-206ENST00000415455 SYAP1Q96A49 352 aaPredicted RBP13.2□□□□□ -0.3
MUC4-206ENST00000415455 CCDC158Q5M9N0 1113 aa13.2□□□□□ -0.3
MUC4-206ENST00000415455 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
MUC4-206ENST00000415455 ADCY9O60503 1353 aa13.19□□□□□ -0.3
MUC4-206ENST00000415455 SYCE3A1L190 88 aa13.19□□□□□ -0.3
MUC4-206ENST00000415455 CPA1P15085 419 aa13.19□□□□□ -0.3
MUC4-206ENST00000415455 JAKMIP1Q96N16 626 aaKnown RBP13.19□□□□□ -0.3
MUC4-206ENST00000415455 RRAGDQ9NQL2 400 aaPredicted RBP13.19□□□□□ -0.3
MUC4-206ENST00000415455 LOC102724428A0A0B4J2F2 783 aa13.19□□□□□ -0.3
MUC4-206ENST00000415455 GOLIM4O00461 696 aa13.19□□□□□ -0.3
MUC4-206ENST00000415455 SIK1P57059 783 aa13.19□□□□□ -0.3
MUC4-206ENST00000415455 PRPF40BQ6NWY9 871 aaKnown RBP13.19□□□□□ -0.3
MUC4-206ENST00000415455 H3BQV1 296 aa13.18□□□□□ -0.3
MUC4-206ENST00000415455 IRS4O14654 1257 aaPredicted RBP13.18□□□□□ -0.3
MUC4-206ENST00000415455 HSP90AB3PQ58FF7 597 aa13.18□□□□□ -0.3
MUC4-206ENST00000415455 IFFO2Q5TF58 517 aa13.18□□□□□ -0.3
MUC4-206ENST00000415455 UNC5CLQ8IV45 518 aa13.18□□□□□ -0.3
MUC4-206ENST00000415455 STK11IPQ8N1F8 1099 aa13.18□□□□□ -0.3
MUC4-206ENST00000415455 CASTP20810 708 aaKnown RBP13.18□□□□□ -0.3
MUC4-206ENST00000415455 CDCA7Q9BWT1 371 aaPredicted RBP13.18□□□□□ -0.3
MUC4-206ENST00000415455 IQSEC3Q9UPP2 1182 aaPredicted RBP13.18□□□□□ -0.3
MUC4-206ENST00000415455 CPDO75976 1380 aa13.17□□□□□ -0.3
MUC4-206ENST00000415455 BAG4O95429 457 aaKnown RBP13.17□□□□□ -0.3
MUC4-206ENST00000415455 IFIT1P09914 478 aaKnown RBP13.17□□□□□ -0.3
MUC4-206ENST00000415455 GLIPR1L2Q4G1C9 344 aa13.17□□□□□ -0.3
MUC4-206ENST00000415455 FAM184AQ8NB25 1140 aa13.17□□□□□ -0.3
MUC4-206ENST00000415455 EAF2Q96CJ1 260 aaPredicted RBP13.17□□□□□ -0.3
MUC4-206ENST00000415455 ANKRD18BA2A2Z9 1011 aa13.17□□□□□ -0.3
MUC4-206ENST00000415455 GNPATO15228 680 aa13.17□□□□□ -0.3
MUC4-206ENST00000415455 TCIRG1Q13488 830 aa13.17□□□□□ -0.3
MUC4-206ENST00000415455 PDIA6Q15084 440 aa13.17□□□□□ -0.3
MUC4-206ENST00000415455 CCDC83Q8IWF9 413 aa13.17□□□□□ -0.3
MUC4-206ENST00000415455 DBNDD2Q9BQY9 259 aa13.17□□□□□ -0.3
MUC4-206ENST00000415455 NCAPD2Q15021 1401 aa13.17□□□□□ -0.3
MUC4-206ENST00000415455 IDH1O75874 414 aaKnown RBP13.17□□□□□ -0.3
MUC4-206ENST00000415455 HLFQ16534 295 aa13.17□□□□□ -0.3
MUC4-206ENST00000415455 CCDC191Q8NCU4 936 aa13.17□□□□□ -0.3
MUC4-206ENST00000415455 GNL2Q13823 731 aaKnown RBP13.16□□□□□ -0.3
MUC4-206ENST00000415455 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
MUC4-206ENST00000415455 SMARCC1Q92922 1105 aaPredicted RBP13.16□□□□□ -0.3
MUC4-206ENST00000415455 CCDC87Q9NVE4 849 aa13.16□□□□□ -0.3
MUC4-206ENST00000415455 ZNF652Q9Y2D9 606 aa13.16□□□□□ -0.3
MUC4-206ENST00000415455 KDM6AO15550 1401 aaPredicted RBP13.16□□□□□ -0.3
MUC4-206ENST00000415455 PKP1Q13835 747 aa13.16□□□□□ -0.3
MUC4-206ENST00000415455 HSPA1LP34931 641 aa13.15□□□□□ -0.3
MUC4-206ENST00000415455 ESYT1Q9BSJ8 1104 aa13.15□□□□□ -0.3
MUC4-206ENST00000415455 TLR7Q9NYK1 1049 aaKnown RBP13.15□□□□□ -0.3
MUC4-206ENST00000415455 CCNL1Q9UK58 526 aaPredicted RBP13.15□□□□□ -0.3
MUC4-206ENST00000415455 CHMLP26374 656 aa13.15□□□□□ -0.3
MUC4-206ENST00000415455 CRKLP46109 303 aaKnown RBP13.15□□□□□ -0.3
MUC4-206ENST00000415455 MARCH10Q8NA82 808 aaPredicted RBP13.15□□□□□ -0.3
MUC4-206ENST00000415455 AK7Q96M32 723 aa13.15□□□□□ -0.3
MUC4-206ENST00000415455 NFAT5O94916 1531 aa13.15□□□□□ -0.3
MUC4-206ENST00000415455 HSP90AA2PQ14568 343 aaPredicted RBP13.15□□□□□ -0.3
MUC4-206ENST00000415455 LRRC24Q50LG9 513 aa13.15□□□□□ -0.3
MUC4-206ENST00000415455 BICD2Q8TD16 824 aa13.15□□□□□ -0.3
MUC4-206ENST00000415455 PUS3Q9BZE2 481 aaKnown RBP13.15□□□□□ -0.3
MUC4-206ENST00000415455 RFC4P35249 363 aa13.14□□□□□ -0.31
MUC4-206ENST00000415455 IGHMBP2P38935 993 aaKnown RBP13.14□□□□□ -0.31
MUC4-206ENST00000415455 TMX3Q96JJ7 454 aa13.14□□□□□ -0.31
MUC4-206ENST00000415455 QTRT2Q9H974 415 aaKnown RBP13.14□□□□□ -0.31
MUC4-206ENST00000415455 IBTKQ9P2D0 1353 aaPredicted RBP13.14□□□□□ -0.31
MUC4-206ENST00000415455 DDX11Q96FC9 970 aa13.14□□□□□ -0.31
MUC4-206ENST00000415455 ABCF2Q9UG63 623 aa13.14□□□□□ -0.31
MUC4-206ENST00000415455 CIZ1Q9ULV3 898 aaPredicted RBP13.14□□□□□ -0.31
MUC4-206ENST00000415455 KIAA2012Q0VF49 1180 aa13.14□□□□□ -0.31
MUC4-206ENST00000415455 USP26Q9BXU7 913 aa13.14□□□□□ -0.31
MUC4-206ENST00000415455 CAMTA1Q9Y6Y1 1673 aa13.14□□□□□ -0.31
MUC4-206ENST00000415455 ITGA6P23229 1130 aa13.13□□□□□ -0.31
MUC4-206ENST00000415455 RNF20Q5VTR2 975 aa13.13□□□□□ -0.31
MUC4-206ENST00000415455 ZNF142P52746 1687 aaPredicted RBP13.13□□□□□ -0.31
MUC4-206ENST00000415455 TOPAZ1Q8N9V7 1692 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms