RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 DDNO94850 711 aaPredicted RBP8.57□□□□□ -1.04
LMBR1-204ENST00000415428 OTUD5Q96G74 571 aa8.57□□□□□ -1.04
LMBR1-204ENST00000415428 USHBP1Q8N6Y0 703 aa8.56□□□□□ -1.04
LMBR1-204ENST00000415428 ZBTB1Q9Y2K1 713 aa8.56□□□□□ -1.04
LMBR1-204ENST00000415428 CACNA1FO60840 1977 aa8.56□□□□□ -1.04
LMBR1-204ENST00000415428 RPAP1Q9BWH6 1393 aaPredicted RBP8.56□□□□□ -1.04
LMBR1-204ENST00000415428 FBXO46Q6PJ61 603 aaPredicted RBP8.56□□□□□ -1.04
LMBR1-204ENST00000415428 NBPF15Q8N660 670 aa8.56□□□□□ -1.04
LMBR1-204ENST00000415428 GPR101Q96P66 508 aaPredicted RBP8.56□□□□□ -1.04
LMBR1-204ENST00000415428 MSH5O43196 834 aa8.55□□□□□ -1.04
LMBR1-204ENST00000415428 STARD3NLO95772 234 aa8.55□□□□□ -1.04
LMBR1-204ENST00000415428 DNAJC10Q8IXB1 793 aa8.55□□□□□ -1.04
LMBR1-204ENST00000415428 ZNF34Q8IZ26 560 aa8.55□□□□□ -1.04
LMBR1-204ENST00000415428 ZBED3Q96IU2 234 aaPredicted RBP8.55□□□□□ -1.04
LMBR1-204ENST00000415428 MKRN1Q9UHC7 482 aaKnown RBP8.55□□□□□ -1.04
LMBR1-204ENST00000415428 PHIPQ8WWQ0 1821 aa8.55□□□□□ -1.04
LMBR1-204ENST00000415428 ST20-MTHFSA0A0A6YYL1 179 aa8.55□□□□□ -1.04
LMBR1-204ENST00000415428 NYXQ9GZU5 481 aa8.55□□□□□ -1.04
LMBR1-204ENST00000415428 ZNF236Q9UL36 1845 aa8.55□□□□□ -1.04
LMBR1-204ENST00000415428 PODXL2Q9NZ53 605 aa8.55□□□□□ -1.04
LMBR1-204ENST00000415428 KLHL34Q8N239 644 aa8.54□□□□□ -1.04
LMBR1-204ENST00000415428 KIAA2012Q0VF49 1180 aa8.54□□□□□ -1.04
LMBR1-204ENST00000415428 SYNE4Q8N205 404 aa8.54□□□□□ -1.04
LMBR1-204ENST00000415428 RNF186Q9NXI6 227 aa8.54□□□□□ -1.04
LMBR1-204ENST00000415428 HPS5Q9UPZ3 1129 aa8.54□□□□□ -1.04
LMBR1-204ENST00000415428 ATP6V0A2Q9Y487 856 aa8.54□□□□□ -1.04
LMBR1-204ENST00000415428 ABCC12Q96J65 1359 aa8.54□□□□□ -1.04
LMBR1-204ENST00000415428 SP8Q8IXZ3 490 aa8.53□□□□□ -1.04
LMBR1-204ENST00000415428 MTHFSP49914 203 aa8.53□□□□□ -1.04
LMBR1-204ENST00000415428 AMER1Q5JTC6 1135 aaPredicted RBP8.53□□□□□ -1.04
LMBR1-204ENST00000415428 RASAL3Q86YV0 1011 aa8.53□□□□□ -1.04
LMBR1-204ENST00000415428 GGNBP2Q9H3C7 697 aa8.53□□□□□ -1.04
LMBR1-204ENST00000415428 BMP8BP34820 402 aa8.53□□□□□ -1.04
LMBR1-204ENST00000415428 ZNF530Q6P9A1 599 aaPredicted RBP8.53□□□□□ -1.04
LMBR1-204ENST00000415428 ZNF652Q9Y2D9 606 aa8.52□□□□□ -1.05
LMBR1-204ENST00000415428 CNBD1Q8NA66 436 aa8.52□□□□□ -1.05
LMBR1-204ENST00000415428 NFATC2IPQ8NCF5 419 aa8.52□□□□□ -1.05
LMBR1-204ENST00000415428 GMLQ99445 158 aa8.52□□□□□ -1.05
LMBR1-204ENST00000415428 PLXNB2O15031 1838 aa8.52□□□□□ -1.05
LMBR1-204ENST00000415428 FKBP1AP62942 108 aaKnown RBP8.52□□□□□ -1.05
LMBR1-204ENST00000415428 RGMBQ6NW40 437 aa8.52□□□□□ -1.05
LMBR1-204ENST00000415428 CDC37L1Q7L3B6 337 aa8.52□□□□□ -1.05
LMBR1-204ENST00000415428 MTMR14Q8NCE2 650 aa8.52□□□□□ -1.05
LMBR1-204ENST00000415428 ZNF790Q6PG37 636 aa8.51□□□□□ -1.05
LMBR1-204ENST00000415428 SMIM5Q71RC9 77 aa8.51□□□□□ -1.05
LMBR1-204ENST00000415428 ZNRF3Q9ULT6 936 aa8.51□□□□□ -1.05
LMBR1-204ENST00000415428 NTSR2O95665 410 aa8.51□□□□□ -1.05
LMBR1-204ENST00000415428 GNRH1P01148 92 aa8.51□□□□□ -1.05
LMBR1-204ENST00000415428 POLR2AP24928 1970 aaKnown RBP8.51□□□□□ -1.05
LMBR1-204ENST00000415428 SYNGAP1Q96PV0 1343 aa8.51□□□□□ -1.05
LMBR1-204ENST00000415428 ZBTB7CA1YPR0 619 aa8.5□□□□□ -1.05
LMBR1-204ENST00000415428 C21orf2O43822 256 aa8.5□□□□□ -1.05
LMBR1-204ENST00000415428 FAM109BQ6ICB4 259 aaPredicted RBP8.5□□□□□ -1.05
LMBR1-204ENST00000415428 C1orf141Q5JVX7 400 aa8.5□□□□□ -1.05
LMBR1-204ENST00000415428 PLEKHG5O94827 1062 aa8.5□□□□□ -1.05
LMBR1-204ENST00000415428 PRMT2P55345 433 aa8.5□□□□□ -1.05
LMBR1-204ENST00000415428 HIRAP54198 1017 aaPredicted RBP8.49□□□□□ -1.05
LMBR1-204ENST00000415428 INHBEP58166 350 aa8.49□□□□□ -1.05
LMBR1-204ENST00000415428 LDLRAD1Q5T700 205 aa8.49□□□□□ -1.05
LMBR1-204ENST00000415428 PPP2R3BQ9Y5P8 575 aa8.49□□□□□ -1.05
LMBR1-204ENST00000415428 PER1O15534 1290 aaPredicted RBP8.49□□□□□ -1.05
LMBR1-204ENST00000415428 BBOX1O75936 387 aa8.49□□□□□ -1.05
LMBR1-204ENST00000415428 VIL1P09327 827 aaKnown RBP8.49□□□□□ -1.05
LMBR1-204ENST00000415428 DGKZQ13574 1117 aa8.49□□□□□ -1.05
LMBR1-204ENST00000415428 TNIP1Q15025 636 aa8.49□□□□□ -1.05
LMBR1-204ENST00000415428 PARP10Q53GL7 1025 aa8.49□□□□□ -1.05
LMBR1-204ENST00000415428 FMNL2Q96PY5 1086 aa8.49□□□□□ -1.05
LMBR1-204ENST00000415428 EIF6P56537 245 aaKnown RBP8.49□□□□□ -1.05
LMBR1-204ENST00000415428 GAS2L2Q8NHY3 880 aa8.49□□□□□ -1.05
LMBR1-204ENST00000415428 IRS2Q9Y4H2 1338 aa8.48□□□□□ -1.05
LMBR1-204ENST00000415428 C15orf52Q6ZUT6 534 aaKnown RBP8.48□□□□□ -1.05
LMBR1-204ENST00000415428 MAP3K15Q6ZN16 1313 aa8.48□□□□□ -1.05
LMBR1-204ENST00000415428 ALDH1A1P00352 501 aa8.48□□□□□ -1.05
LMBR1-204ENST00000415428 LTV1Q96GA3 475 aaPredicted RBP8.48□□□□□ -1.05
LMBR1-204ENST00000415428 SETDB2Q96T68 719 aa8.48□□□□□ -1.05
LMBR1-204ENST00000415428 UTRNP46939 3433 aa8.48□□□□□ -1.05
LMBR1-204ENST00000415428 AGBL3Q8NEM8 1001 aa8.48□□□□□ -1.05
LMBR1-204ENST00000415428 DDX60LQ5H9U9 1706 aaKnown RBP8.47□□□□□ -1.05
LMBR1-204ENST00000415428 TRIM28Q13263 835 aaKnown RBP8.47□□□□□ -1.05
LMBR1-204ENST00000415428 CSRNP1Q96S65 589 aa8.47□□□□□ -1.05
LMBR1-204ENST00000415428 PTPRFP10586 1907 aa8.47□□□□□ -1.05
LMBR1-204ENST00000415428 ADGRA2Q96PE1 1338 aa8.47□□□□□ -1.05
LMBR1-204ENST00000415428 CAPN15O75808 1086 aa8.47□□□□□ -1.05
LMBR1-204ENST00000415428 TPTE2Q6XPS3 522 aa8.47□□□□□ -1.05
LMBR1-204ENST00000415428 SPEF2Q9C093 1822 aa8.47□□□□□ -1.05
LMBR1-204ENST00000415428 SF3B3Q15393 1217 aaKnown RBP8.46□□□□□ -1.05
LMBR1-204ENST00000415428 CYP4F22Q6NT55 531 aa8.46□□□□□ -1.05
LMBR1-204ENST00000415428 RBM17Q96I25 401 aaKnown RBP8.46□□□□□ -1.05
LMBR1-204ENST00000415428 A0A0G2JMZ2 1700 aa8.46□□□□□ -1.05
LMBR1-204ENST00000415428 LMOD1P29536 600 aaPredicted RBP8.46□□□□□ -1.05
LMBR1-204ENST00000415428 IL17REQ8NFR9 667 aa8.46□□□□□ -1.05
LMBR1-204ENST00000415428 PNISRQ8TF01 805 aaKnown RBP8.46□□□□□ -1.05
LMBR1-204ENST00000415428 ZBTB48P10074 688 aaPredicted RBP8.46□□□□□ -1.06
LMBR1-204ENST00000415428 TMC1Q8TDI8 760 aa8.46□□□□□ -1.06
LMBR1-204ENST00000415428 FOCADQ5VW36 1801 aa8.45□□□□□ -1.06
LMBR1-204ENST00000415428 FBLN1P23142 703 aa8.45□□□□□ -1.06
LMBR1-204ENST00000415428 MTHFSDQ2M296 383 aaKnown RBP8.45□□□□□ -1.06
LMBR1-204ENST00000415428 NBPF26B4DH59 902 aa8.45□□□□□ -1.06
LMBR1-204ENST00000415428 AOC2O75106 756 aa8.45□□□□□ -1.06
LMBR1-204ENST00000415428 NBPF10Q6P3W6 841 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms