RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 CFAP44Q96MT7 982 aa26.87■■□□□ 1.89
LMBR1-203ENST00000414218 ZNF277Q9NRM2 450 aaPredicted RBP26.87■■□□□ 1.89
LMBR1-203ENST00000414218 RIC1Q4ADV7 1423 aa26.86■■□□□ 1.89
LMBR1-203ENST00000414218 SMC1BQ8NDV3 1235 aa26.86■■□□□ 1.89
LMBR1-203ENST00000414218 WDR90Q96KV7 1748 aa26.86■■□□□ 1.89
LMBR1-203ENST00000414218 UTP14AQ9BVJ6 771 aaKnown RBP26.86■■□□□ 1.89
LMBR1-203ENST00000414218 CHPF2Q9P2E5 772 aa26.86■■□□□ 1.89
LMBR1-203ENST00000414218 HOXA10P31260 410 aaPredicted RBP26.85■■□□□ 1.89
LMBR1-203ENST00000414218 HDGFL1Q5TGJ6 251 aa26.85■■□□□ 1.89
LMBR1-203ENST00000414218 C3orf67Q6ZVT6 689 aa26.85■■□□□ 1.89
LMBR1-203ENST00000414218 DDNO94850 711 aaPredicted RBP26.84■■□□□ 1.89
LMBR1-203ENST00000414218 SYNE4Q8N205 404 aa26.84■■□□□ 1.89
LMBR1-203ENST00000414218 MBIPQ9NS73 344 aa26.84■■□□□ 1.89
LMBR1-203ENST00000414218 HSP90AB3PQ58FF7 597 aa26.83■■□□□ 1.89
LMBR1-203ENST00000414218 RBM17Q96I25 401 aaKnown RBP26.83■■□□□ 1.89
LMBR1-203ENST00000414218 ANKRD36CQ5JPF3 1778 aa26.82■■□□□ 1.88
LMBR1-203ENST00000414218 HOXB7P09629 217 aa26.82■■□□□ 1.88
LMBR1-203ENST00000414218 HTRA3P83110 453 aa26.82■■□□□ 1.88
LMBR1-203ENST00000414218 DUSP27Q5VZP5 1158 aa26.82■■□□□ 1.88
LMBR1-203ENST00000414218 DNAJC5GQ8N7S2 189 aa26.82■■□□□ 1.88
LMBR1-203ENST00000414218 NLRP3Q96P20 1036 aa26.82■■□□□ 1.88
LMBR1-203ENST00000414218 ZNF853P0CG23 659 aa26.81■■□□□ 1.88
LMBR1-203ENST00000414218 TCIRG1Q13488 830 aa26.81■■□□□ 1.88
LMBR1-203ENST00000414218 CCDC184Q52MB2 194 aa26.81■■□□□ 1.88
LMBR1-203ENST00000414218 SLC10A5Q5PT55 438 aa26.81■■□□□ 1.88
LMBR1-203ENST00000414218 NLRP10Q86W26 655 aa26.81■■□□□ 1.88
LMBR1-203ENST00000414218 CRAMP1Q96RY5 1269 aa26.81■■□□□ 1.88
LMBR1-203ENST00000414218 TCERG1O14776 1098 aaKnown RBP26.79■■□□□ 1.88
LMBR1-203ENST00000414218 IARSP41252 1262 aaKnown RBP26.79■■□□□ 1.88
LMBR1-203ENST00000414218 CC2D2BQ6DHV5 1058 aa26.79■■□□□ 1.88
LMBR1-203ENST00000414218 DBF4Q9UBU7 674 aaPredicted RBP26.79■■□□□ 1.88
LMBR1-203ENST00000414218 CALD1Q05682 793 aaKnown RBP26.78■■□□□ 1.88
LMBR1-203ENST00000414218 SLC51AQ86UW1 340 aa26.78■■□□□ 1.88
LMBR1-203ENST00000414218 IFT57Q9NWB7 429 aa26.78■■□□□ 1.88
LMBR1-203ENST00000414218 SNED1Q8TER0 1413 aa26.78■■□□□ 1.88
LMBR1-203ENST00000414218 PPEF1O14829 653 aaPredicted RBP26.77■■□□□ 1.88
LMBR1-203ENST00000414218 HCLS1P14317 486 aaPredicted RBP26.77■■□□□ 1.88
LMBR1-203ENST00000414218 GNAI1P63096 354 aa26.77■■□□□ 1.88
LMBR1-203ENST00000414218 PLBD2Q8NHP8 589 aa26.77■■□□□ 1.88
LMBR1-203ENST00000414218 PSMD1Q99460 953 aa26.77■■□□□ 1.88
LMBR1-203ENST00000414218 TRMT112Q9UI30 125 aaKnown RBP26.77■■□□□ 1.88
LMBR1-203ENST00000414218 RNF123Q5XPI4 1314 aa26.76■■□□□ 1.87
LMBR1-203ENST00000414218 ZNF541Q9H0D2 1346 aa26.76■■□□□ 1.87
LMBR1-203ENST00000414218 ANKRD13DQ6ZTN6 518 aa26.76■■□□□ 1.87
LMBR1-203ENST00000414218 ZNF428Q96B54 188 aa26.76■■□□□ 1.87
LMBR1-203ENST00000414218 HYPKQ9NX55 129 aa26.76■■□□□ 1.87
LMBR1-203ENST00000414218 LAMB2P55268 1798 aa26.74■■□□□ 1.87
LMBR1-203ENST00000414218 ELL2O00472 640 aaPredicted RBP26.74■■□□□ 1.87
LMBR1-203ENST00000414218 SH3TC1Q8TE82 1336 aa26.73■■□□□ 1.87
LMBR1-203ENST00000414218 GRIPAP1Q4V328 841 aa26.73■■□□□ 1.87
LMBR1-203ENST00000414218 L3MBTL3Q96JM7 780 aaPredicted RBP26.73■■□□□ 1.87
LMBR1-203ENST00000414218 ABCC4O15439 1325 aa26.72■■□□□ 1.87
LMBR1-203ENST00000414218 FZD9O00144 591 aa26.72■■□□□ 1.87
LMBR1-203ENST00000414218 POTEIP0CG38 1075 aa26.72■■□□□ 1.87
LMBR1-203ENST00000414218 POTEJP0CG39 1038 aa26.72■■□□□ 1.87
LMBR1-203ENST00000414218 IQCA1LA6NCM1 817 aa26.71■■□□□ 1.87
LMBR1-203ENST00000414218 ZNF316A6NFI3 1004 aaPredicted RBP26.71■■□□□ 1.87
LMBR1-203ENST00000414218 ATP5J2-PTCD1G3V325 749 aa26.71■■□□□ 1.87
LMBR1-203ENST00000414218 JDP2Q8WYK2 163 aa26.71■■□□□ 1.87
LMBR1-203ENST00000414218 ISCA1Q9BUE6 129 aa26.71■■□□□ 1.87
LMBR1-203ENST00000414218 ATP6V0A2Q9Y487 856 aa26.71■■□□□ 1.87
LMBR1-203ENST00000414218 SCN4AP35499 1836 aa26.7■■□□□ 1.87
LMBR1-203ENST00000414218 CHADLQ6NUI6 762 aa26.7■■□□□ 1.86
LMBR1-203ENST00000414218 C8orf58Q8NAV2 365 aa26.7■■□□□ 1.86
LMBR1-203ENST00000414218 KLRG1Q96E93 195 aa26.7■■□□□ 1.86
LMBR1-203ENST00000414218 TMX4Q9H1E5 349 aaPredicted RBP26.7■■□□□ 1.86
LMBR1-203ENST00000414218 TAF1DQ9H5J8 278 aaPredicted RBP26.7■■□□□ 1.86
LMBR1-203ENST00000414218 COL4A5P29400 1685 aa26.69■■□□□ 1.86
LMBR1-203ENST00000414218 BBOX1O75936 387 aa26.68■■□□□ 1.86
LMBR1-203ENST00000414218 DDX46Q7L014 1031 aaKnown RBP26.68■■□□□ 1.86
LMBR1-203ENST00000414218 LARGE2Q8N3Y3 721 aa26.68■■□□□ 1.86
LMBR1-203ENST00000414218 FAM89AQ96GI7 184 aa26.68■■□□□ 1.86
LMBR1-203ENST00000414218 PHAXQ9H814 394 aaKnown RBP26.68■■□□□ 1.86
LMBR1-203ENST00000414218 EIF6P56537 245 aaKnown RBP26.66■■□□□ 1.86
LMBR1-203ENST00000414218 RIC3Q7Z5B4 369 aa26.66■■□□□ 1.86
LMBR1-203ENST00000414218 GPC2Q8N158 579 aa26.66■■□□□ 1.86
LMBR1-203ENST00000414218 HACL1Q9UJ83 578 aa26.66■■□□□ 1.86
LMBR1-203ENST00000414218 TAF1P21675 1872 aa26.66■■□□□ 1.86
LMBR1-203ENST00000414218 DDX60Q8IY21 1712 aaKnown RBP26.65■■□□□ 1.86
LMBR1-203ENST00000414218 GOLGA2Q08379 1002 aa26.65■■□□□ 1.86
LMBR1-203ENST00000414218 RTL5Q5HYW3 569 aaPredicted RBP26.65■■□□□ 1.86
LMBR1-203ENST00000414218 SP8Q8IXZ3 490 aa26.65■■□□□ 1.86
LMBR1-203ENST00000414218 GJA3Q9Y6H8 435 aa26.65■■□□□ 1.86
LMBR1-203ENST00000414218 ANP32CO43423 234 aa26.64■■□□□ 1.86
LMBR1-203ENST00000414218 TRIM28Q13263 835 aaKnown RBP26.64■■□□□ 1.86
LMBR1-203ENST00000414218 GRAPQ13588 217 aa26.64■■□□□ 1.86
LMBR1-203ENST00000414218 EAPPQ56P03 285 aaPredicted RBP26.64■■□□□ 1.86
LMBR1-203ENST00000414218 LDHDQ86WU2 507 aa26.64■■□□□ 1.86
LMBR1-203ENST00000414218 TSPYL6Q8N831 410 aa26.64■■□□□ 1.86
LMBR1-203ENST00000414218 GRAPLQ8TC17 118 aaPredicted RBP26.64■■□□□ 1.86
LMBR1-203ENST00000414218 MRS2Q9HD23 443 aa26.64■■□□□ 1.86
LMBR1-203ENST00000414218 PPIP5K2O43314 1243 aa26.63■■□□□ 1.85
LMBR1-203ENST00000414218 EPHX2P34913 555 aa26.63■■□□□ 1.85
LMBR1-203ENST00000414218 AOC3Q16853 763 aa26.63■■□□□ 1.85
LMBR1-203ENST00000414218 TSR2Q969E8 191 aaKnown RBP26.63■■□□□ 1.85
LMBR1-203ENST00000414218 CCDC27Q2M243 656 aa26.62■■□□□ 1.85
LMBR1-203ENST00000414218 CCDC30Q5VVM6 783 aa26.62■■□□□ 1.85
LMBR1-203ENST00000414218 WWC1Q8IX03 1113 aa26.62■■□□□ 1.85
LMBR1-203ENST00000414218 NIM1KQ8IY84 436 aa26.62■■□□□ 1.85
LMBR1-203ENST00000414218 DPP8Q6V1X1 898 aaPredicted RBP26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms