RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 SLFNL1Q499Z3 407 aa17.36■□□□□ 0.37
SEMA3F-202ENST00000413852 ZNF589Q86UQ0 364 aaPredicted RBP17.36■□□□□ 0.37
SEMA3F-202ENST00000413852 TRIM5Q9C035 493 aa17.36■□□□□ 0.37
SEMA3F-202ENST00000413852 MAP3K2Q9Y2U5 619 aa17.36■□□□□ 0.37
SEMA3F-202ENST00000413852 MAP3K5Q99683 1374 aa17.36■□□□□ 0.37
SEMA3F-202ENST00000413852 RGPD1P0DJD0 1748 aa17.36■□□□□ 0.37
SEMA3F-202ENST00000413852 NECTIN1Q15223 517 aa17.36■□□□□ 0.37
SEMA3F-202ENST00000413852 MAP3K11Q16584 847 aa17.36■□□□□ 0.37
SEMA3F-202ENST00000413852 ABTB2Q8N961 1025 aa17.36■□□□□ 0.37
SEMA3F-202ENST00000413852 TNMDQ9H2S6 317 aa17.36■□□□□ 0.37
SEMA3F-202ENST00000413852 KDRP35968 1356 aa17.35■□□□□ 0.37
SEMA3F-202ENST00000413852 GLRX3O76003 335 aaKnown RBP17.35■□□□□ 0.37
SEMA3F-202ENST00000413852 EIF4A1P60842 406 aaKnown RBP17.35■□□□□ 0.37
SEMA3F-202ENST00000413852 CCDC144BQ3MJ40 725 aa17.35■□□□□ 0.37
SEMA3F-202ENST00000413852 VPS53Q5VIR6 699 aa17.35■□□□□ 0.37
SEMA3F-202ENST00000413852 CCDC144CPQ8IYA2 1237 aa17.35■□□□□ 0.37
SEMA3F-202ENST00000413852 EAF2Q96CJ1 260 aaPredicted RBP17.35■□□□□ 0.37
SEMA3F-202ENST00000413852 AOX1Q06278 1338 aa17.35■□□□□ 0.37
SEMA3F-202ENST00000413852 GTF2F1P35269 517 aaKnown RBP eCLIP17.35■□□□□ 0.37
SEMA3F-202ENST00000413852 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
SEMA3F-202ENST00000413852 ECHDC1Q9NTX5 307 aa17.35■□□□□ 0.37
SEMA3F-202ENST00000413852 ATP6V1DQ9Y5K8 247 aa17.35■□□□□ 0.37
SEMA3F-202ENST00000413852 SLC27A2O14975 620 aa17.34■□□□□ 0.37
SEMA3F-202ENST00000413852 DMTNQ08495 405 aa17.34■□□□□ 0.37
SEMA3F-202ENST00000413852 CCDC171Q6TFL3 1326 aa17.34■□□□□ 0.37
SEMA3F-202ENST00000413852 PIP4K2AP48426 406 aaPredicted RBP17.34■□□□□ 0.37
SEMA3F-202ENST00000413852 CCDC129Q6ZRS4 1044 aa17.34■□□□□ 0.37
SEMA3F-202ENST00000413852 GOLGA6L4A6NEF3 574 aa17.34■□□□□ 0.37
SEMA3F-202ENST00000413852 NBPF6Q5VWK0 638 aa17.34■□□□□ 0.37
SEMA3F-202ENST00000413852 PGBD1Q96JS3 809 aa17.34■□□□□ 0.37
SEMA3F-202ENST00000413852 SPATA32Q96LK8 384 aa17.34■□□□□ 0.37
SEMA3F-202ENST00000413852 NBPF4Q96M43 638 aa17.34■□□□□ 0.37
SEMA3F-202ENST00000413852 ADCY9O60503 1353 aa17.33■□□□□ 0.37
SEMA3F-202ENST00000413852 USP27XA6NNY8 438 aa17.33■□□□□ 0.37
SEMA3F-202ENST00000413852 KRT85P78386 507 aa17.33■□□□□ 0.37
SEMA3F-202ENST00000413852 FAM200AQ8TCP9 573 aa17.33■□□□□ 0.37
SEMA3F-202ENST00000413852 TAOK2Q9UL54 1235 aa17.33■□□□□ 0.37
SEMA3F-202ENST00000413852 PTPRUQ92729 1446 aa17.33■□□□□ 0.36
SEMA3F-202ENST00000413852 SASH1O94885 1247 aa17.33■□□□□ 0.36
SEMA3F-202ENST00000413852 BICD2Q8TD16 824 aa17.33■□□□□ 0.36
SEMA3F-202ENST00000413852 A0A0U1RQG5 324 aaPredicted RBP17.32■□□□□ 0.36
SEMA3F-202ENST00000413852 CACTINQ8WUQ7 758 aaKnown RBP17.32■□□□□ 0.36
SEMA3F-202ENST00000413852 SEC62Q99442 399 aaKnown RBP17.32■□□□□ 0.36
SEMA3F-202ENST00000413852 USP16Q9Y5T5 823 aa17.32■□□□□ 0.36
SEMA3F-202ENST00000413852 FAM208AQ9UK61 1670 aaKnown RBP17.32■□□□□ 0.36
SEMA3F-202ENST00000413852 NPHP1O15259 732 aa17.32■□□□□ 0.36
SEMA3F-202ENST00000413852 ZKSCAN1P17029 563 aaPredicted RBP17.32■□□□□ 0.36
SEMA3F-202ENST00000413852 TOB2Q14106 344 aaPredicted RBP17.32■□□□□ 0.36
SEMA3F-202ENST00000413852 SUCLG2Q96I99 432 aa17.32■□□□□ 0.36
SEMA3F-202ENST00000413852 FSD1Q9BTV5 496 aa17.32■□□□□ 0.36
SEMA3F-202ENST00000413852 NCBP1Q09161 790 aaKnown RBP17.31■□□□□ 0.36
SEMA3F-202ENST00000413852 CHAF1AQ13111 956 aaPredicted RBP17.31■□□□□ 0.36
SEMA3F-202ENST00000413852 ADAMTS13Q76LX8 1427 aa17.31■□□□□ 0.36
SEMA3F-202ENST00000413852 LEO1Q8WVC0 666 aaPredicted RBP17.31■□□□□ 0.36
SEMA3F-202ENST00000413852 BTBD11A6QL63 1104 aa17.3■□□□□ 0.36
SEMA3F-202ENST00000413852 BICC1Q9H694 974 aaKnown RBP17.3■□□□□ 0.36
SEMA3F-202ENST00000413852 TRMT1Q9NXH9 659 aaKnown RBP17.3■□□□□ 0.36
SEMA3F-202ENST00000413852 ZSCAN25Q6NSZ9 544 aa17.3■□□□□ 0.36
SEMA3F-202ENST00000413852 RUFY2Q8WXA3 655 aa17.3■□□□□ 0.36
SEMA3F-202ENST00000413852 KAZALD1Q96I82 304 aa17.3■□□□□ 0.36
SEMA3F-202ENST00000413852 TNNT1P13805 278 aa17.3■□□□□ 0.36
SEMA3F-202ENST00000413852 SPATA31D1Q6ZQQ2 1576 aa17.3■□□□□ 0.36
SEMA3F-202ENST00000413852 GUCY1B3Q02153 619 aa17.29■□□□□ 0.36
SEMA3F-202ENST00000413852 BLOC1S2Q6QNY1 142 aa17.29■□□□□ 0.36
SEMA3F-202ENST00000413852 C11orf57Q6ZUT1 292 aaPredicted RBP17.29■□□□□ 0.36
SEMA3F-202ENST00000413852 TMEM2Q9UHN6 1383 aa17.29■□□□□ 0.36
SEMA3F-202ENST00000413852 ZNF165P49910 485 aa17.29■□□□□ 0.36
SEMA3F-202ENST00000413852 ZNF75DP51815 510 aa17.29■□□□□ 0.36
SEMA3F-202ENST00000413852 A0A0G2JLW4 131 aa17.28■□□□□ 0.36
SEMA3F-202ENST00000413852 MAP4K1Q92918 833 aa17.28■□□□□ 0.36
SEMA3F-202ENST00000413852 SH2B1Q9NRF2 756 aaPredicted RBP17.28■□□□□ 0.36
SEMA3F-202ENST00000413852 TPD52L1Q16890 204 aaPredicted RBP17.28■□□□□ 0.36
SEMA3F-202ENST00000413852 SIRT1Q96EB6 747 aa17.28■□□□□ 0.36
SEMA3F-202ENST00000413852 ZSCAN31Q96LW9 406 aaPredicted RBP17.28■□□□□ 0.36
SEMA3F-202ENST00000413852 CLIP2Q9UDT6 1046 aa17.28■□□□□ 0.36
SEMA3F-202ENST00000413852 NAP1L2Q9ULW6 460 aaPredicted RBP17.28■□□□□ 0.36
SEMA3F-202ENST00000413852 TECPR2O15040 1411 aa17.28■□□□□ 0.36
SEMA3F-202ENST00000413852 TEFQ10587 303 aa17.28■□□□□ 0.36
SEMA3F-202ENST00000413852 BRF1Q92994 677 aa17.28■□□□□ 0.36
SEMA3F-202ENST00000413852 GOLGA6L6A8MZA4 724 aa17.27■□□□□ 0.36
SEMA3F-202ENST00000413852 HSP90B1P14625 803 aaKnown RBP17.27■□□□□ 0.36
SEMA3F-202ENST00000413852 ANKRD7Q92527 254 aa17.27■□□□□ 0.36
SEMA3F-202ENST00000413852 EVI5LQ96CN4 794 aa17.27■□□□□ 0.36
SEMA3F-202ENST00000413852 HTATSF1O43719 755 aaKnown RBP17.27■□□□□ 0.36
SEMA3F-202ENST00000413852 ZNF530Q6P9A1 599 aaPredicted RBP17.27■□□□□ 0.36
SEMA3F-202ENST00000413852 FILIP1Q7Z7B0 1213 aa17.27■□□□□ 0.36
SEMA3F-202ENST00000413852 TTC41PQ6P2S7 1318 aa17.27■□□□□ 0.35
SEMA3F-202ENST00000413852 MYL6BP14649 208 aa17.26■□□□□ 0.35
SEMA3F-202ENST00000413852 RGPD8O14715 1765 aaPredicted RBP17.26■□□□□ 0.35
SEMA3F-202ENST00000413852 RPS6KB1P23443 525 aa17.26■□□□□ 0.35
SEMA3F-202ENST00000413852 HDGFP51858 240 aaKnown RBP17.26■□□□□ 0.35
SEMA3F-202ENST00000413852 EPHA10Q5JZY3 1008 aa17.26■□□□□ 0.35
SEMA3F-202ENST00000413852 CHST3Q7LGC8 479 aa17.26■□□□□ 0.35
SEMA3F-202ENST00000413852 TTC21AQ8NDW8 1320 aa17.26■□□□□ 0.35
SEMA3F-202ENST00000413852 COL15A1P39059 1388 aa17.26■□□□□ 0.35
SEMA3F-202ENST00000413852 TNRQ92752 1358 aa17.26■□□□□ 0.35
SEMA3F-202ENST00000413852 SLC39A6Q13433 755 aa17.25■□□□□ 0.35
SEMA3F-202ENST00000413852 DNAJC2Q99543 621 aaKnown RBP17.25■□□□□ 0.35
SEMA3F-202ENST00000413852 CCT2P78371 535 aaKnown RBP17.25■□□□□ 0.35
SEMA3F-202ENST00000413852 G3BP1Q13283 466 aaKnown RBP eCLIP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms