RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 SMTNL1A8MU46 457 aa10.59□□□□□ -0.71
SIK3-202ENST00000413553 EPB41L2O43491 1005 aaKnown RBP10.59□□□□□ -0.71
SIK3-202ENST00000413553 UBTFL1P0CB47 393 aaPredicted RBP10.59□□□□□ -0.71
SIK3-202ENST00000413553 CNTROBQ8N137 903 aa10.59□□□□□ -0.71
SIK3-202ENST00000413553 CCDC112Q8NEF3 446 aa10.59□□□□□ -0.71
SIK3-202ENST00000413553 DDX54Q8TDD1 881 aaKnown RBP10.59□□□□□ -0.71
SIK3-202ENST00000413553 JAKMIP1Q96N16 626 aaKnown RBP10.59□□□□□ -0.71
SIK3-202ENST00000413553 AOX1Q06278 1338 aa10.59□□□□□ -0.71
SIK3-202ENST00000413553 KDRP35968 1356 aa10.59□□□□□ -0.71
SIK3-202ENST00000413553 CRB1P82279 1406 aa10.59□□□□□ -0.71
SIK3-202ENST00000413553 GNAT3A8MTJ3 354 aa10.59□□□□□ -0.71
SIK3-202ENST00000413553 KRT85P78386 507 aa10.59□□□□□ -0.71
SIK3-202ENST00000413553 NAA30Q147X3 362 aaPredicted RBP10.59□□□□□ -0.71
SIK3-202ENST00000413553 TPD52L1Q16890 204 aaPredicted RBP10.59□□□□□ -0.71
SIK3-202ENST00000413553 ANO6Q4KMQ2 910 aa10.59□□□□□ -0.71
SIK3-202ENST00000413553 LSG1Q9H089 658 aaKnown RBP10.59□□□□□ -0.71
SIK3-202ENST00000413553 TNMDQ9H2S6 317 aa10.59□□□□□ -0.71
SIK3-202ENST00000413553 PRDM11Q9NQV5 511 aa10.59□□□□□ -0.71
SIK3-202ENST00000413553 NRBP1Q9UHY1 535 aa10.59□□□□□ -0.71
SIK3-202ENST00000413553 MRVI1Q9Y6F6 885 aa10.59□□□□□ -0.71
SIK3-202ENST00000413553 SOS1Q07889 1333 aaPredicted RBP10.59□□□□□ -0.71
SIK3-202ENST00000413553 PDRG1Q9NUG6 133 aa10.58□□□□□ -0.72
SIK3-202ENST00000413553 NFAT5O94916 1531 aa10.58□□□□□ -0.72
SIK3-202ENST00000413553 LIG1P18858 919 aa10.58□□□□□ -0.72
SIK3-202ENST00000413553 FAM173BQ6P4H8 233 aa10.58□□□□□ -0.72
SIK3-202ENST00000413553 TTC6Q86TZ1 520 aa10.58□□□□□ -0.72
SIK3-202ENST00000413553 NECAB1Q8N987 351 aa10.58□□□□□ -0.72
SIK3-202ENST00000413553 XIRP1Q702N8 1843 aaKnown RBP10.58□□□□□ -0.72
SIK3-202ENST00000413553 HYPKQ9NX55 129 aa10.57□□□□□ -0.72
SIK3-202ENST00000413553 CTNNA3Q9UI47 895 aa10.57□□□□□ -0.72
SIK3-202ENST00000413553 MARF1Q9Y4F3 1742 aaKnown RBP10.57□□□□□ -0.72
SIK3-202ENST00000413553 CCDC30Q5VVM6 783 aa10.57□□□□□ -0.72
SIK3-202ENST00000413553 LARP1BQ659C4 914 aaKnown RBP10.57□□□□□ -0.72
SIK3-202ENST00000413553 RAPGEF4Q8WZA2 1011 aa10.57□□□□□ -0.72
SIK3-202ENST00000413553 CBX8Q9HC52 389 aa10.57□□□□□ -0.72
SIK3-202ENST00000413553 ADCK5Q3MIX3 580 aa10.56□□□□□ -0.72
SIK3-202ENST00000413553 PLEKHO1Q53GL0 409 aaPredicted RBP10.56□□□□□ -0.72
SIK3-202ENST00000413553 ZSCAN25Q6NSZ9 544 aa10.56□□□□□ -0.72
SIK3-202ENST00000413553 PRPF40BQ6NWY9 871 aaKnown RBP10.56□□□□□ -0.72
SIK3-202ENST00000413553 PI4K2BQ8TCG2 481 aa10.56□□□□□ -0.72
SIK3-202ENST00000413553 RHPN1Q8TCX5 695 aa10.56□□□□□ -0.72
SIK3-202ENST00000413553 DACT1Q9NYF0 836 aa10.56□□□□□ -0.72
SIK3-202ENST00000413553 CYP46A1Q9Y6A2 500 aa10.56□□□□□ -0.72
SIK3-202ENST00000413553 ERBB3P21860 1342 aa10.56□□□□□ -0.72
SIK3-202ENST00000413553 SOS2Q07890 1332 aaPredicted RBP10.56□□□□□ -0.72
SIK3-202ENST00000413553 C1orf141Q5JVX7 400 aa10.56□□□□□ -0.72
SIK3-202ENST00000413553 PPP1R42Q7Z4L9 355 aa10.56□□□□□ -0.72
SIK3-202ENST00000413553 TRPM3Q9HCF6 1732 aaPredicted RBP10.56□□□□□ -0.72
SIK3-202ENST00000413553 FAM208AQ9UK61 1670 aaKnown RBP10.56□□□□□ -0.72
SIK3-202ENST00000413553 KCNJ4P48050 445 aa10.56□□□□□ -0.72
SIK3-202ENST00000413553 TAF3Q5VWG9 929 aa10.56□□□□□ -0.72
SIK3-202ENST00000413553 ZNF530Q6P9A1 599 aaPredicted RBP10.56□□□□□ -0.72
SIK3-202ENST00000413553 CDC37L1Q7L3B6 337 aa10.56□□□□□ -0.72
SIK3-202ENST00000413553 BBXQ8WY36 941 aaPredicted RBP10.56□□□□□ -0.72
SIK3-202ENST00000413553 ZSCAN31Q96LW9 406 aaPredicted RBP10.56□□□□□ -0.72
SIK3-202ENST00000413553 SH2B1Q9NRF2 756 aaPredicted RBP10.56□□□□□ -0.72
SIK3-202ENST00000413553 CLIP2Q9UDT6 1046 aa10.56□□□□□ -0.72
SIK3-202ENST00000413553 ZNF75DP51815 510 aa10.55□□□□□ -0.72
SIK3-202ENST00000413553 PIP4K2BP78356 416 aa10.55□□□□□ -0.72
SIK3-202ENST00000413553 GABPB1Q06547 395 aaPredicted RBP10.55□□□□□ -0.72
SIK3-202ENST00000413553 OS9Q13438 667 aaPredicted RBP10.55□□□□□ -0.72
SIK3-202ENST00000413553 SYCP1Q15431 976 aa10.55□□□□□ -0.72
SIK3-202ENST00000413553 AEBP2Q6ZN18 517 aaPredicted RBP10.55□□□□□ -0.72
SIK3-202ENST00000413553 KLHL34Q8N239 644 aa10.55□□□□□ -0.72
SIK3-202ENST00000413553 USP44Q9H0E7 712 aa10.55□□□□□ -0.72
SIK3-202ENST00000413553 PAXBP1Q9Y5B6 917 aa10.55□□□□□ -0.72
SIK3-202ENST00000413553 USP54Q70EL1 1684 aa10.55□□□□□ -0.72
SIK3-202ENST00000413553 SLIT3O75094 1523 aa10.55□□□□□ -0.72
SIK3-202ENST00000413553 SRGAP3O43295 1099 aa10.55□□□□□ -0.72
SIK3-202ENST00000413553 RAB11FIP3O75154 756 aa10.55□□□□□ -0.72
SIK3-202ENST00000413553 ME3Q16798 604 aa10.55□□□□□ -0.72
SIK3-202ENST00000413553 VPS53Q5VIR6 699 aa10.55□□□□□ -0.72
SIK3-202ENST00000413553 TFIP11Q9UBB9 837 aaKnown RBP10.55□□□□□ -0.72
SIK3-202ENST00000413553 PXDNQ92626 1479 aa10.55□□□□□ -0.72
SIK3-202ENST00000413553 EVA1CP58658 441 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 FGD1P98174 961 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 PTH1RQ03431 593 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 AMOTQ4VCS5 1084 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 CEP135Q66GS9 1140 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 BICD2Q8TD16 824 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 SSH3Q8TE77 659 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 KIF1BPQ96EK5 621 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 SPATA32Q96LK8 384 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 DNAJC25Q9H1X3 360 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.54□□□□□ -0.72
SIK3-202ENST00000413553 DDX41Q9UJV9 622 aaKnown RBP10.54□□□□□ -0.72
SIK3-202ENST00000413553 V9GYY5 206 aaPredicted RBP10.54□□□□□ -0.72
SIK3-202ENST00000413553 ZNF165P49910 485 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 CACTINQ8WUQ7 758 aaKnown RBP10.54□□□□□ -0.72
SIK3-202ENST00000413553 RUFY2Q8WXA3 655 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 STRN4Q9NRL3 753 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 RGPD1P0DJD0 1748 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.54□□□□□ -0.72
SIK3-202ENST00000413553 HTATSF1O43719 755 aaKnown RBP10.54□□□□□ -0.72
SIK3-202ENST00000413553 TEFQ10587 303 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 TOM1L2Q6ZVM7 507 aa10.54□□□□□ -0.72
SIK3-202ENST00000413553 MAP3K5Q99683 1374 aa10.53□□□□□ -0.72
SIK3-202ENST00000413553 ZKSCAN1P17029 563 aaPredicted RBP10.53□□□□□ -0.72
SIK3-202ENST00000413553 ST3GAL1Q11201 340 aa10.53□□□□□ -0.72
SIK3-202ENST00000413553 MPRIPQ6WCQ1 1025 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms