RNA–Protein interactions for RNA: ENST00000413437.1

CSTF2-202, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-202ENST00000413437 PPP4R3CPQ6ZMV5 832 aa9.89□□□□□ -0.83
CSTF2-202ENST00000413437 FAM89AQ96GI7 184 aa9.89□□□□□ -0.83
CSTF2-202ENST00000413437 YTHDC1Q96MU7 727 aaKnown RBP9.89□□□□□ -0.83
CSTF2-202ENST00000413437 BRIP1Q9BX63 1249 aa9.89□□□□□ -0.83
CSTF2-202ENST00000413437 NPHP1O15259 732 aa9.88□□□□□ -0.83
CSTF2-202ENST00000413437 GTF2E1P29083 439 aaPredicted RBP9.88□□□□□ -0.83
CSTF2-202ENST00000413437 FKBP5Q13451 457 aaPredicted RBP9.88□□□□□ -0.83
CSTF2-202ENST00000413437 UTP14AQ9BVJ6 771 aaKnown RBP9.88□□□□□ -0.83
CSTF2-202ENST00000413437 ZNF219Q9P2Y4 722 aaPredicted RBP9.88□□□□□ -0.83
CSTF2-202ENST00000413437 TRMT112Q9UI30 125 aaKnown RBP9.88□□□□□ -0.83
CSTF2-202ENST00000413437 TNNQ9UQP3 1299 aa9.88□□□□□ -0.83
CSTF2-202ENST00000413437 BCS1LQ9Y276 419 aa9.88□□□□□ -0.83
CSTF2-202ENST00000413437 BRCA1P38398 1863 aaKnown RBP9.87□□□□□ -0.83
CSTF2-202ENST00000413437 BCAR3O75815 825 aa9.87□□□□□ -0.83
CSTF2-202ENST00000413437 DDX58O95786 925 aaKnown RBP9.87□□□□□ -0.83
CSTF2-202ENST00000413437 RARSP54136 660 aaKnown RBP9.87□□□□□ -0.83
CSTF2-202ENST00000413437 ST5P78524 1137 aa9.87□□□□□ -0.83
CSTF2-202ENST00000413437 PARP10Q53GL7 1025 aa9.87□□□□□ -0.83
CSTF2-202ENST00000413437 HSP90AB3PQ58FF7 597 aa9.87□□□□□ -0.83
CSTF2-202ENST00000413437 PPP1R42Q7Z4L9 355 aa9.87□□□□□ -0.83
CSTF2-202ENST00000413437 ZNF622Q969S3 477 aaKnown RBP eCLIP9.87□□□□□ -0.83
CSTF2-202ENST00000413437 COL4A1P02462 1669 aa9.87□□□□□ -0.83
CSTF2-202ENST00000413437 KLRG2A4D1S0 409 aaPredicted RBP9.86□□□□□ -0.83
CSTF2-202ENST00000413437 NEURL1BA8MQ27 555 aa9.86□□□□□ -0.83
CSTF2-202ENST00000413437 H0YIN7 160 aa9.86□□□□□ -0.83
CSTF2-202ENST00000413437 SRGNP10124 158 aa9.86□□□□□ -0.83
CSTF2-202ENST00000413437 PDE6BP35913 854 aa9.86□□□□□ -0.83
CSTF2-202ENST00000413437 TRIM28Q13263 835 aaKnown RBP9.86□□□□□ -0.83
CSTF2-202ENST00000413437 SLC10A5Q5PT55 438 aa9.86□□□□□ -0.83
CSTF2-202ENST00000413437 OLFM4Q6UX06 510 aa9.86□□□□□ -0.83
CSTF2-202ENST00000413437 DNAAF4Q8WXU2 420 aa9.86□□□□□ -0.83
CSTF2-202ENST00000413437 NYXQ9GZU5 481 aa9.86□□□□□ -0.83
CSTF2-202ENST00000413437 SMC4Q9NTJ3 1288 aa9.86□□□□□ -0.83
CSTF2-202ENST00000413437 PIM2Q9P1W9 311 aa9.86□□□□□ -0.83
CSTF2-202ENST00000413437 NOB1Q9ULX3 412 aaKnown RBP9.86□□□□□ -0.83
CSTF2-202ENST00000413437 LAMB2P55268 1798 aa9.86□□□□□ -0.83
CSTF2-202ENST00000413437 DLEC1Q9Y238 1755 aa9.86□□□□□ -0.83
CSTF2-202ENST00000413437 DDX60Q8IY21 1712 aaKnown RBP9.85□□□□□ -0.83
CSTF2-202ENST00000413437 ALDH1L2Q3SY69 923 aa9.85□□□□□ -0.83
CSTF2-202ENST00000413437 BEND3Q5T5X7 828 aa9.85□□□□□ -0.83
CSTF2-202ENST00000413437 SLC4A10Q6U841 1118 aa9.85□□□□□ -0.83
CSTF2-202ENST00000413437 CHMP4AQ9BY43 222 aa9.85□□□□□ -0.83
CSTF2-202ENST00000413437 CWC25Q9NXE8 425 aaPredicted RBP9.85□□□□□ -0.83
CSTF2-202ENST00000413437 IBTKQ9P2D0 1353 aaPredicted RBP9.85□□□□□ -0.83
CSTF2-202ENST00000413437 TAF1P21675 1872 aa9.85□□□□□ -0.83
CSTF2-202ENST00000413437 CACNA1SQ13698 1873 aa9.85□□□□□ -0.83
CSTF2-202ENST00000413437 CACNA1FO60840 1977 aa9.84□□□□□ -0.83
CSTF2-202ENST00000413437 SRCAPQ6ZRS2 3230 aa9.84□□□□□ -0.83
CSTF2-202ENST00000413437 SH3TC1Q8TE82 1336 aa9.84□□□□□ -0.83
CSTF2-202ENST00000413437 SLX4Q8IY92 1834 aa9.84□□□□□ -0.83
CSTF2-202ENST00000413437 GCKRQ14397 625 aa9.84□□□□□ -0.83
CSTF2-202ENST00000413437 DALRD3Q5D0E6 543 aaKnown RBP9.84□□□□□ -0.83
CSTF2-202ENST00000413437 CCDC191Q8NCU4 936 aa9.84□□□□□ -0.83
CSTF2-202ENST00000413437 H7C1W4 665 aa9.83□□□□□ -0.84
CSTF2-202ENST00000413437 IRS4O14654 1257 aaPredicted RBP9.83□□□□□ -0.84
CSTF2-202ENST00000413437 C21orf2O43822 256 aa9.83□□□□□ -0.84
CSTF2-202ENST00000413437 PCCAP05165 728 aaPredicted RBP9.83□□□□□ -0.84
CSTF2-202ENST00000413437 CT47B1P0C2W7 299 aaPredicted RBP9.83□□□□□ -0.84
CSTF2-202ENST00000413437 NPR1P16066 1061 aa9.83□□□□□ -0.84
CSTF2-202ENST00000413437 PRELPP51888 382 aa9.83□□□□□ -0.84
CSTF2-202ENST00000413437 CASP7P55210 303 aa9.83□□□□□ -0.84
CSTF2-202ENST00000413437 CRY2Q49AN0 593 aa9.83□□□□□ -0.84
CSTF2-202ENST00000413437 STYK1Q6J9G0 422 aa9.83□□□□□ -0.84
CSTF2-202ENST00000413437 TTLL6Q8N841 843 aa9.83□□□□□ -0.84
CSTF2-202ENST00000413437 ZBTB38Q8NAP3 1195 aaPredicted RBP9.83□□□□□ -0.84
CSTF2-202ENST00000413437 MASTLQ96GX5 879 aa9.83□□□□□ -0.84
CSTF2-202ENST00000413437 CCDC85AQ96PX6 553 aaPredicted RBP9.83□□□□□ -0.84
CSTF2-202ENST00000413437 RASSF7Q02833 373 aa9.82□□□□□ -0.84
CSTF2-202ENST00000413437 NEXNQ0ZGT2 675 aa9.82□□□□□ -0.84
CSTF2-202ENST00000413437 EPHA10Q5JZY3 1008 aa9.82□□□□□ -0.84
CSTF2-202ENST00000413437 PRPF40BQ6NWY9 871 aaKnown RBP9.82□□□□□ -0.84
CSTF2-202ENST00000413437 ARHGAP27Q6ZUM4 889 aa9.82□□□□□ -0.84
CSTF2-202ENST00000413437 UBE3BQ7Z3V4 1068 aa9.82□□□□□ -0.84
CSTF2-202ENST00000413437 LINS1Q8NG48 757 aa9.82□□□□□ -0.84
CSTF2-202ENST00000413437 C7orf43Q8WVR3 580 aa9.82□□□□□ -0.84
CSTF2-202ENST00000413437 NLRP3Q96P20 1036 aa9.82□□□□□ -0.84
CSTF2-202ENST00000413437 SEC31BQ9NQW1 1179 aa9.82□□□□□ -0.84
CSTF2-202ENST00000413437 RIC1Q4ADV7 1423 aa9.82□□□□□ -0.84
CSTF2-202ENST00000413437 HOXA10P31260 410 aaPredicted RBP9.81□□□□□ -0.84
CSTF2-202ENST00000413437 RPGRQ92834 1020 aaKnown RBP9.81□□□□□ -0.84
CSTF2-202ENST00000413437 FRAT1Q92837 279 aaPredicted RBP9.81□□□□□ -0.84
CSTF2-202ENST00000413437 ARFGEF1Q9Y6D6 1849 aa9.81□□□□□ -0.84
CSTF2-202ENST00000413437 ABCC4O15439 1325 aa9.81□□□□□ -0.84
CSTF2-202ENST00000413437 PTPRCP08575 1304 aa9.81□□□□□ -0.84
CSTF2-202ENST00000413437 DCAF8L1A6NGE4 600 aa9.8□□□□□ -0.84
CSTF2-202ENST00000413437 PDE8AO60658 829 aa9.8□□□□□ -0.84
CSTF2-202ENST00000413437 NBPF7P0C2Y1 421 aaPredicted RBP9.8□□□□□ -0.84
CSTF2-202ENST00000413437 BRPF1P55201 1214 aaPredicted RBP9.8□□□□□ -0.84
CSTF2-202ENST00000413437 SF3B3Q15393 1217 aaKnown RBP9.8□□□□□ -0.84
CSTF2-202ENST00000413437 CELF1Q92879 486 aaKnown RBP9.8□□□□□ -0.84
CSTF2-202ENST00000413437 CNKSR1Q969H4 720 aa9.8□□□□□ -0.84
CSTF2-202ENST00000413437 CLUAP1Q96AJ1 413 aa9.8□□□□□ -0.84
CSTF2-202ENST00000413437 RBM17Q96I25 401 aaKnown RBP9.8□□□□□ -0.84
CSTF2-202ENST00000413437 KAZALD1Q96I82 304 aa9.8□□□□□ -0.84
CSTF2-202ENST00000413437 SRCIN1Q9C0H9 1055 aa9.8□□□□□ -0.84
CSTF2-202ENST00000413437 RNF123Q5XPI4 1314 aa9.8□□□□□ -0.84
CSTF2-202ENST00000413437 CDHR2Q9BYE9 1310 aa9.8□□□□□ -0.84
CSTF2-202ENST00000413437 NFKBIEO00221 500 aa9.79□□□□□ -0.84
CSTF2-202ENST00000413437 GRIN3BO60391 1043 aa9.79□□□□□ -0.84
CSTF2-202ENST00000413437 TRIM27P14373 513 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms