RNA–Protein interactions for RNA: ENST00000413164.6

SLC13A3-204, Transcript of solute carrier family 13 member 3, humanhuman

TSL 2 BASIC

Gene SLC13A3, Length 2,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-204ENST00000413164 SSFA2P28290 1259 aa25.37■■□□□ 1.65
SLC13A3-204ENST00000413164 RFX5P48382 616 aaPredicted RBP25.37■■□□□ 1.65
SLC13A3-204ENST00000413164 DDX54Q8TDD1 881 aaKnown RBP25.37■■□□□ 1.65
SLC13A3-204ENST00000413164 BCL9LQ86UU0 1499 aa25.36■■□□□ 1.65
SLC13A3-204ENST00000413164 SPATA31A1Q5TZJ5 1347 aa25.36■■□□□ 1.65
SLC13A3-204ENST00000413164 IL27Q8NEV9 243 aa25.36■■□□□ 1.65
SLC13A3-204ENST00000413164 LSG1Q9H089 658 aaKnown RBP25.36■■□□□ 1.65
SLC13A3-204ENST00000413164 UBE3BQ7Z3V4 1068 aa25.36■■□□□ 1.65
SLC13A3-204ENST00000413164 KLHDC4Q8TBB5 520 aa25.36■■□□□ 1.65
SLC13A3-204ENST00000413164 SPATA31A5Q5VU36 1347 aa25.34■■□□□ 1.65
SLC13A3-204ENST00000413164 SPATA31A7Q8IWB4 1347 aa25.34■■□□□ 1.65
SLC13A3-204ENST00000413164 ATP5J2-PTCD1G3V325 749 aa25.34■■□□□ 1.65
SLC13A3-204ENST00000413164 PTCD1O75127 700 aaKnown RBP25.34■■□□□ 1.65
SLC13A3-204ENST00000413164 A0A087WZG4 1122 aa25.34■■□□□ 1.65
SLC13A3-204ENST00000413164 NUCB2P80303 420 aa25.34■■□□□ 1.65
SLC13A3-204ENST00000413164 ZGPATQ8N5A5 531 aaKnown RBP25.34■■□□□ 1.65
SLC13A3-204ENST00000413164 EVI5LQ96CN4 794 aa25.34■■□□□ 1.65
SLC13A3-204ENST00000413164 TMX3Q96JJ7 454 aa25.34■■□□□ 1.65
SLC13A3-204ENST00000413164 SIL1Q9H173 461 aa25.34■■□□□ 1.65
SLC13A3-204ENST00000413164 AFF2P51816 1311 aa25.33■■□□□ 1.65
SLC13A3-204ENST00000413164 PTPN12Q05209 780 aaKnown RBP25.33■■□□□ 1.65
SLC13A3-204ENST00000413164 CWC27Q6UX04 472 aaKnown RBP25.33■■□□□ 1.65
SLC13A3-204ENST00000413164 THRAP3Q9Y2W1 955 aaKnown RBP25.33■■□□□ 1.65
SLC13A3-204ENST00000413164 JARID2Q92833 1246 aaPredicted RBP25.32■■□□□ 1.64
SLC13A3-204ENST00000413164 A1BGP04217 495 aa25.32■■□□□ 1.64
SLC13A3-204ENST00000413164 VPS72Q15906 364 aa25.32■■□□□ 1.64
SLC13A3-204ENST00000413164 TTLL7Q6ZT98 887 aa25.32■■□□□ 1.64
SLC13A3-204ENST00000413164 TLR7Q9NYK1 1049 aaKnown RBP25.32■■□□□ 1.64
SLC13A3-204ENST00000413164 H7C1W4 665 aa25.31■■□□□ 1.64
SLC13A3-204ENST00000413164 CUL4AQ13619 759 aa25.31■■□□□ 1.64
SLC13A3-204ENST00000413164 CCDC8Q9H0W5 538 aaPredicted RBP25.31■■□□□ 1.64
SLC13A3-204ENST00000413164 TJP1Q07157 1748 aa25.31■■□□□ 1.64
SLC13A3-204ENST00000413164 RUFY2Q8WXA3 655 aa25.3■■□□□ 1.64
SLC13A3-204ENST00000413164 DIAPH3Q9NSV4 1193 aa25.3■■□□□ 1.64
SLC13A3-204ENST00000413164 PTMSP20962 102 aa25.3■■□□□ 1.64
SLC13A3-204ENST00000413164 PKP1Q13835 747 aa25.29■■□□□ 1.64
SLC13A3-204ENST00000413164 BAG4O95429 457 aaKnown RBP25.28■■□□□ 1.64
SLC13A3-204ENST00000413164 KIAA1211Q6ZU35 1233 aa25.28■■□□□ 1.64
SLC13A3-204ENST00000413164 CDCA7Q9BWT1 371 aaPredicted RBP25.28■■□□□ 1.64
SLC13A3-204ENST00000413164 UPF3BQ9BZI7 483 aaKnown RBP25.28■■□□□ 1.64
SLC13A3-204ENST00000413164 SNX14Q9Y5W7 946 aa25.28■■□□□ 1.64
SLC13A3-204ENST00000413164 DISP2A7MBM2 1401 aa25.28■■□□□ 1.64
SLC13A3-204ENST00000413164 EXOC5O00471 708 aa25.27■■□□□ 1.64
SLC13A3-204ENST00000413164 FOXO4P98177 505 aa25.27■■□□□ 1.64
SLC13A3-204ENST00000413164 TMOD3Q9NYL9 352 aa25.27■■□□□ 1.64
SLC13A3-204ENST00000413164 INTS4Q96HW7 963 aaKnown RBP25.27■■□□□ 1.64
SLC13A3-204ENST00000413164 SNRKQ9NRH2 765 aa25.27■■□□□ 1.64
SLC13A3-204ENST00000413164 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.27■■□□□ 1.64
SLC13A3-204ENST00000413164 CWC25Q9NXE8 425 aaPredicted RBP25.26■■□□□ 1.63
SLC13A3-204ENST00000413164 FSD2A1L4K1 749 aa25.25■■□□□ 1.63
SLC13A3-204ENST00000413164 SKOR2Q2VWA4 1001 aaPredicted RBP25.25■■□□□ 1.63
SLC13A3-204ENST00000413164 BARGINQ6ZT62 677 aa25.25■■□□□ 1.63
SLC13A3-204ENST00000413164 RASEFQ8IZ41 740 aa25.25■■□□□ 1.63
SLC13A3-204ENST00000413164 ZDHHC9Q9Y397 364 aa25.25■■□□□ 1.63
SLC13A3-204ENST00000413164 WNK3Q9BYP7 1800 aa25.25■■□□□ 1.63
SLC13A3-204ENST00000413164 HIP1O00291 1037 aa25.25■■□□□ 1.63
SLC13A3-204ENST00000413164 FAM98CQ17RN3 349 aaKnown RBP25.25■■□□□ 1.63
SLC13A3-204ENST00000413164 CCDC191Q8NCU4 936 aa25.25■■□□□ 1.63
SLC13A3-204ENST00000413164 GZF1Q9H116 711 aaPredicted RBP25.25■■□□□ 1.63
SLC13A3-204ENST00000413164 TNNI3KQ59H18 835 aa25.24■■□□□ 1.63
SLC13A3-204ENST00000413164 LMBR1LQ6UX01 489 aa25.24■■□□□ 1.63
SLC13A3-204ENST00000413164 KCNB2Q92953 911 aa25.24■■□□□ 1.63
SLC13A3-204ENST00000413164 FPGT-TNNI3KV9GXZ4 949 aa25.24■■□□□ 1.63
SLC13A3-204ENST00000413164 PTH1RQ03431 593 aa25.24■■□□□ 1.63
SLC13A3-204ENST00000413164 TFCP2Q12800 502 aa25.24■■□□□ 1.63
SLC13A3-204ENST00000413164 VSIG10Q8N0Z9 540 aa25.24■■□□□ 1.63
SLC13A3-204ENST00000413164 TTC14Q96N46 770 aa25.24■■□□□ 1.63
SLC13A3-204ENST00000413164 DBNLQ9UJU6 430 aaKnown RBP25.24■■□□□ 1.63
SLC13A3-204ENST00000413164 ITGB4P16144 1822 aa25.23■■□□□ 1.63
SLC13A3-204ENST00000413164 DDB1Q16531 1140 aa25.23■■□□□ 1.63
SLC13A3-204ENST00000413164 PIGBQ92521 554 aa25.23■■□□□ 1.63
SLC13A3-204ENST00000413164 BOLA2Q9H3K6 86 aa25.23■■□□□ 1.63
SLC13A3-204ENST00000413164 TRPC5Q9UL62 973 aaPredicted RBP25.23■■□□□ 1.63
SLC13A3-204ENST00000413164 A0A0G2JS52 829 aa25.22■■□□□ 1.63
SLC13A3-204ENST00000413164 ZBTB3Q9H5J0 574 aa25.22■■□□□ 1.63
SLC13A3-204ENST00000413164 GOLGA6L22H0YM25 854 aa25.22■■□□□ 1.63
SLC13A3-204ENST00000413164 ATP5JP18859 108 aa25.22■■□□□ 1.63
SLC13A3-204ENST00000413164 ASAP1Q9ULH1 1129 aa25.22■■□□□ 1.63
SLC13A3-204ENST00000413164 GJD4Q96KN9 370 aaPredicted RBP25.21■■□□□ 1.63
SLC13A3-204ENST00000413164 CCDC171Q6TFL3 1326 aa25.2■■□□□ 1.63
SLC13A3-204ENST00000413164 L1TD1Q5T7N2 865 aaKnown RBP25.2■■□□□ 1.63
SLC13A3-204ENST00000413164 FAM227BQ96M60 508 aa25.2■■□□□ 1.63
SLC13A3-204ENST00000413164 TEX13AQ9BXU3 409 aaPredicted RBP25.2■■□□□ 1.63
SLC13A3-204ENST00000413164 QTRT2Q9H974 415 aaKnown RBP25.2■■□□□ 1.63
SLC13A3-204ENST00000413164 NMIQ13287 307 aaPredicted RBP25.2■■□□□ 1.62
SLC13A3-204ENST00000413164 NECTIN1Q15223 517 aa25.2■■□□□ 1.62
SLC13A3-204ENST00000413164 ISCA1Q9BUE6 129 aa25.2■■□□□ 1.62
SLC13A3-204ENST00000413164 ATG3Q9NT62 314 aa25.2■■□□□ 1.62
SLC13A3-204ENST00000413164 BRPF3Q9ULD4 1205 aa25.19■■□□□ 1.62
SLC13A3-204ENST00000413164 MED23Q9ULK4 1368 aa25.18■■□□□ 1.62
SLC13A3-204ENST00000413164 ATG9AQ7Z3C6 839 aa25.18■■□□□ 1.62
SLC13A3-204ENST00000413164 MAP4K1Q92918 833 aa25.18■■□□□ 1.62
SLC13A3-204ENST00000413164 NOL8Q76FK4 1167 aaKnown RBP25.17■■□□□ 1.62
SLC13A3-204ENST00000413164 DNAJC10Q8IXB1 793 aa25.17■■□□□ 1.62
SLC13A3-204ENST00000413164 FSD1Q9BTV5 496 aa25.17■■□□□ 1.62
SLC13A3-204ENST00000413164 TM6SF1Q9BZW5 370 aa25.17■■□□□ 1.62
SLC13A3-204ENST00000413164 BCL9O00512 1426 aa25.17■■□□□ 1.62
SLC13A3-204ENST00000413164 ATRNO75882 1429 aa25.17■■□□□ 1.62
SLC13A3-204ENST00000413164 A0A0D9SFI3 127 aa25.17■■□□□ 1.62
SLC13A3-204ENST00000413164 GOLGA6L3A6NEY3 463 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms