RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.35
PTPRN-203ENST00000412847 DCTN1Q14203 1278 aa17.24■□□□□ 0.35
PTPRN-203ENST00000412847 NYXQ9GZU5 481 aa17.24■□□□□ 0.35
PTPRN-203ENST00000412847 LMOD1P29536 600 aaPredicted RBP17.23■□□□□ 0.35
PTPRN-203ENST00000412847 MAP2K1Q02750 393 aaPredicted RBP17.23■□□□□ 0.35
PTPRN-203ENST00000412847 CRY2Q49AN0 593 aa17.23■□□□□ 0.35
PTPRN-203ENST00000412847 CC2D2BQ6DHV5 1058 aa17.23■□□□□ 0.35
PTPRN-203ENST00000412847 GJA3Q9Y6H8 435 aa17.23■□□□□ 0.35
PTPRN-203ENST00000412847 IBTKQ9P2D0 1353 aaPredicted RBP17.23■□□□□ 0.35
PTPRN-203ENST00000412847 TAF1P21675 1872 aa17.22■□□□□ 0.35
PTPRN-203ENST00000412847 HTATSF1O43719 755 aaKnown RBP17.22■□□□□ 0.35
PTPRN-203ENST00000412847 NUTM1Q86Y26 1132 aa17.22■□□□□ 0.35
PTPRN-203ENST00000412847 CASP8AP2Q9UKL3 1982 aa17.21■□□□□ 0.35
PTPRN-203ENST00000412847 RPGRQ92834 1020 aaKnown RBP17.21■□□□□ 0.35
PTPRN-203ENST00000412847 ABHD8Q96I13 439 aa17.21■□□□□ 0.35
PTPRN-203ENST00000412847 DDX21Q9NR30 783 aaKnown RBP eCLIP17.21■□□□□ 0.35
PTPRN-203ENST00000412847 MAP3K15Q6ZN16 1313 aa17.21■□□□□ 0.34
PTPRN-203ENST00000412847 TAF7Q15545 349 aaPredicted RBP17.2■□□□□ 0.34
PTPRN-203ENST00000412847 NGEFQ8N5V2 710 aa17.2■□□□□ 0.34
PTPRN-203ENST00000412847 ERVV-1B6SEH8 477 aa17.19■□□□□ 0.34
PTPRN-203ENST00000412847 SCNN1DP51172 638 aa17.19■□□□□ 0.34
PTPRN-203ENST00000412847 GRIPAP1Q4V328 841 aa17.19■□□□□ 0.34
PTPRN-203ENST00000412847 KIF6Q6ZMV9 814 aa17.19■□□□□ 0.34
PTPRN-203ENST00000412847 PAXIP1Q6ZW49 1069 aaPredicted RBP17.19■□□□□ 0.34
PTPRN-203ENST00000412847 LARGE2Q8N3Y3 721 aa17.19■□□□□ 0.34
PTPRN-203ENST00000412847 PPP2R1AP30153 589 aa17.18■□□□□ 0.34
PTPRN-203ENST00000412847 HOXA10P31260 410 aaPredicted RBP17.18■□□□□ 0.34
PTPRN-203ENST00000412847 ECE1P42892 770 aa17.18■□□□□ 0.34
PTPRN-203ENST00000412847 CAPNS2Q96L46 248 aa17.18■□□□□ 0.34
PTPRN-203ENST00000412847 LRRC37AA6NMS7 1700 aa17.18■□□□□ 0.34
PTPRN-203ENST00000412847 DDX60Q8IY21 1712 aaKnown RBP17.18■□□□□ 0.34
PTPRN-203ENST00000412847 UBN2Q6ZU65 1347 aa17.18■□□□□ 0.34
PTPRN-203ENST00000412847 POLR2AP24928 1970 aaKnown RBP17.17■□□□□ 0.34
PTPRN-203ENST00000412847 PPEF1O14829 653 aaPredicted RBP17.17■□□□□ 0.34
PTPRN-203ENST00000412847 GPTP24298 496 aa17.17■□□□□ 0.34
PTPRN-203ENST00000412847 EPS15P42566 896 aa17.17■□□□□ 0.34
PTPRN-203ENST00000412847 FMR1Q06787 632 aaKnown RBP eCLIP17.17■□□□□ 0.34
PTPRN-203ENST00000412847 MIS18AQ9NYP9 233 aa17.17■□□□□ 0.34
PTPRN-203ENST00000412847 GRM1Q13255 1194 aa17.16■□□□□ 0.34
PTPRN-203ENST00000412847 CYP4F22Q6NT55 531 aa17.16■□□□□ 0.34
PTPRN-203ENST00000412847 TTLL7Q6ZT98 887 aa17.16■□□□□ 0.34
PTPRN-203ENST00000412847 USP50Q70EL3 339 aaPredicted RBP17.16■□□□□ 0.34
PTPRN-203ENST00000412847 NIM1KQ8IY84 436 aa17.16■□□□□ 0.34
PTPRN-203ENST00000412847 PNISRQ8TF01 805 aaKnown RBP17.16■□□□□ 0.34
PTPRN-203ENST00000412847 RBM17Q96I25 401 aaKnown RBP17.16■□□□□ 0.34
PTPRN-203ENST00000412847 CRAMP1Q96RY5 1269 aa17.16■□□□□ 0.34
PTPRN-203ENST00000412847 BEGAINQ9BUH8 593 aa17.16■□□□□ 0.34
PTPRN-203ENST00000412847 ZBTB3Q9H5J0 574 aa17.16■□□□□ 0.34
PTPRN-203ENST00000412847 MYL6BP14649 208 aa17.15■□□□□ 0.34
PTPRN-203ENST00000412847 FAM161AQ3B820 660 aa17.15■□□□□ 0.34
PTPRN-203ENST00000412847 SUSD4Q5VX71 490 aa17.15■□□□□ 0.34
PTPRN-203ENST00000412847 SLC51AQ86UW1 340 aa17.15■□□□□ 0.34
PTPRN-203ENST00000412847 RRP7AQ9Y3A4 280 aaKnown RBP17.15■□□□□ 0.34
PTPRN-203ENST00000412847 AKAP11Q9UKA4 1901 aa17.15■□□□□ 0.34
PTPRN-203ENST00000412847 TRAF5O00463 557 aa17.14■□□□□ 0.33
PTPRN-203ENST00000412847 TCERG1O14776 1098 aaKnown RBP17.14■□□□□ 0.33
PTPRN-203ENST00000412847 PPIP5K2O43314 1243 aa17.14■□□□□ 0.33
PTPRN-203ENST00000412847 NTSR2O95665 410 aa17.14■□□□□ 0.33
PTPRN-203ENST00000412847 NEFMP07197 916 aa17.14■□□□□ 0.33
PTPRN-203ENST00000412847 TLL2Q9Y6L7 1015 aa17.14■□□□□ 0.33
PTPRN-203ENST00000412847 CST9Q5W186 159 aa17.13■□□□□ 0.33
PTPRN-203ENST00000412847 GPR101Q96P66 508 aaPredicted RBP17.13■□□□□ 0.33
PTPRN-203ENST00000412847 ADARB2Q9NS39 739 aaKnown RBP17.13■□□□□ 0.33
PTPRN-203ENST00000412847 SLC34A2O95436 690 aa17.12■□□□□ 0.33
PTPRN-203ENST00000412847 EIF4A1P60842 406 aaKnown RBP17.12■□□□□ 0.33
PTPRN-203ENST00000412847 AOC3Q16853 763 aa17.12■□□□□ 0.33
PTPRN-203ENST00000412847 GIGYF2Q6Y7W6 1299 aaKnown RBP17.12■□□□□ 0.33
PTPRN-203ENST00000412847 PPP1R42Q7Z4L9 355 aa17.12■□□□□ 0.33
PTPRN-203ENST00000412847 ZNF34Q8IZ26 560 aa17.12■□□□□ 0.33
PTPRN-203ENST00000412847 TMX4Q9H1E5 349 aaPredicted RBP17.12■□□□□ 0.33
PTPRN-203ENST00000412847 GPRC5DQ9NZD1 345 aa17.12■□□□□ 0.33
PTPRN-203ENST00000412847 ERBB4Q15303 1308 aa17.12■□□□□ 0.33
PTPRN-203ENST00000412847 C3orf67Q6ZVT6 689 aa17.11■□□□□ 0.33
PTPRN-203ENST00000412847 VPS33BQ9H267 617 aa17.11■□□□□ 0.33
PTPRN-203ENST00000412847 DUOX1Q9NRD9 1551 aa17.11■□□□□ 0.33
PTPRN-203ENST00000412847 CCDC85CA6NKD9 419 aa17.1■□□□□ 0.33
PTPRN-203ENST00000412847 MAP2K2P36507 400 aa17.1■□□□□ 0.33
PTPRN-203ENST00000412847 PARP10Q53GL7 1025 aa17.1■□□□□ 0.33
PTPRN-203ENST00000412847 SUPT20HQ8NEM7 779 aa17.1■□□□□ 0.33
PTPRN-203ENST00000412847 NLRP3Q96P20 1036 aa17.1■□□□□ 0.33
PTPRN-203ENST00000412847 ATP6V0A2Q9Y487 856 aa17.1■□□□□ 0.33
PTPRN-203ENST00000412847 AOC2O75106 756 aa17.09■□□□□ 0.33
PTPRN-203ENST00000412847 TSKSQ9UJT2 592 aa17.09■□□□□ 0.33
PTPRN-203ENST00000412847 ZNRF3Q9ULT6 936 aa17.09■□□□□ 0.33
PTPRN-203ENST00000412847 ABCC4O15439 1325 aa17.09■□□□□ 0.33
PTPRN-203ENST00000412847 CDHR2Q9BYE9 1310 aa17.09■□□□□ 0.33
PTPRN-203ENST00000412847 PSME4Q14997 1843 aa17.08■□□□□ 0.33
PTPRN-203ENST00000412847 CELF2O95319 508 aaKnown RBP17.08■□□□□ 0.32
PTPRN-203ENST00000412847 MLLT1Q03111 559 aaPredicted RBP17.08■□□□□ 0.32
PTPRN-203ENST00000412847 CXCL9Q07325 125 aa17.08■□□□□ 0.32
PTPRN-203ENST00000412847 SAPCD2Q86UD0 394 aa17.08■□□□□ 0.32
PTPRN-203ENST00000412847 THUMPD2Q9BTF0 503 aaKnown RBP17.08■□□□□ 0.32
PTPRN-203ENST00000412847 GMPSP49915 693 aaPredicted RBP17.07■□□□□ 0.32
PTPRN-203ENST00000412847 NFE2L2Q16236 605 aa17.07■□□□□ 0.32
PTPRN-203ENST00000412847 UTP14AQ9BVJ6 771 aaKnown RBP17.07■□□□□ 0.32
PTPRN-203ENST00000412847 GLIS2Q9BZE0 524 aaPredicted RBP17.07■□□□□ 0.32
PTPRN-203ENST00000412847 CA12O43570 354 aa17.06■□□□□ 0.32
PTPRN-203ENST00000412847 SLC10A5Q5PT55 438 aa17.06■□□□□ 0.32
PTPRN-203ENST00000412847 CIAPIN1Q6FI81 312 aa17.06■□□□□ 0.32
PTPRN-203ENST00000412847 DPP8Q6V1X1 898 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms