RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 ISCA1Q9BUE6 129 aa12.85□□□□□ -0.35
TTC39A-207ENST00000411642 METTL22Q9BUU2 404 aaPredicted RBP12.85□□□□□ -0.35
TTC39A-207ENST00000411642 SMC4Q9NTJ3 1288 aa12.85□□□□□ -0.35
TTC39A-207ENST00000411642 NTSR2O95665 410 aa12.84□□□□□ -0.35
TTC39A-207ENST00000411642 TGFB2P61812 414 aa12.84□□□□□ -0.35
TTC39A-207ENST00000411642 UTP14AQ9BVJ6 771 aaKnown RBP12.84□□□□□ -0.35
TTC39A-207ENST00000411642 BRIP1Q9BX63 1249 aa12.84□□□□□ -0.35
TTC39A-207ENST00000411642 RIC1Q4ADV7 1423 aa12.83□□□□□ -0.36
TTC39A-207ENST00000411642 A0A0G2JLW4 131 aa12.83□□□□□ -0.36
TTC39A-207ENST00000411642 DPEP1P16444 411 aa12.83□□□□□ -0.36
TTC39A-207ENST00000411642 CHRNA5P30532 468 aa12.83□□□□□ -0.36
TTC39A-207ENST00000411642 RARSP54136 660 aaKnown RBP12.83□□□□□ -0.36
TTC39A-207ENST00000411642 NEXNQ0ZGT2 675 aa12.83□□□□□ -0.36
TTC39A-207ENST00000411642 ERFEQ4G0M1 354 aa12.83□□□□□ -0.36
TTC39A-207ENST00000411642 DNAAF4Q8WXU2 420 aa12.83□□□□□ -0.36
TTC39A-207ENST00000411642 RNF123Q5XPI4 1314 aa12.83□□□□□ -0.36
TTC39A-207ENST00000411642 F6X3S4 739 aa12.82□□□□□ -0.36
TTC39A-207ENST00000411642 PDE6BP35913 854 aa12.82□□□□□ -0.36
TTC39A-207ENST00000411642 TRIM28Q13263 835 aaKnown RBP12.82□□□□□ -0.36
TTC39A-207ENST00000411642 TRMT112Q9UI30 125 aaKnown RBP12.82□□□□□ -0.36
TTC39A-207ENST00000411642 WWC3Q9ULE0 1092 aa12.82□□□□□ -0.36
TTC39A-207ENST00000411642 TAF1P21675 1872 aa12.82□□□□□ -0.36
TTC39A-207ENST00000411642 PTPRCP08575 1304 aa12.82□□□□□ -0.36
TTC39A-207ENST00000411642 SH3TC1Q8TE82 1336 aa12.82□□□□□ -0.36
TTC39A-207ENST00000411642 CHD4Q14839 1912 aa12.82□□□□□ -0.36
TTC39A-207ENST00000411642 SLX4Q8IY92 1834 aa12.81□□□□□ -0.36
TTC39A-207ENST00000411642 H0YIN7 160 aa12.81□□□□□ -0.36
TTC39A-207ENST00000411642 IGKV5-2P06315 115 aa12.81□□□□□ -0.36
TTC39A-207ENST00000411642 CWF19L2Q2TBE0 894 aaKnown RBP12.81□□□□□ -0.36
TTC39A-207ENST00000411642 C2CD5Q86YS7 1000 aa12.81□□□□□ -0.36
TTC39A-207ENST00000411642 PELP1Q8IZL8 1130 aaKnown RBP12.81□□□□□ -0.36
TTC39A-207ENST00000411642 CCDC191Q8NCU4 936 aa12.81□□□□□ -0.36
TTC39A-207ENST00000411642 CWC25Q9NXE8 425 aaPredicted RBP12.81□□□□□ -0.36
TTC39A-207ENST00000411642 NEURL1BA8MQ27 555 aa12.8□□□□□ -0.36
TTC39A-207ENST00000411642 KCNA3P22001 575 aa12.8□□□□□ -0.36
TTC39A-207ENST00000411642 SLC4A10Q6U841 1118 aa12.8□□□□□ -0.36
TTC39A-207ENST00000411642 SYNE4Q8N205 404 aa12.8□□□□□ -0.36
TTC39A-207ENST00000411642 LINS1Q8NG48 757 aa12.8□□□□□ -0.36
TTC39A-207ENST00000411642 FAM89AQ96GI7 184 aa12.8□□□□□ -0.36
TTC39A-207ENST00000411642 PDZRN3Q9UPQ7 1066 aa12.8□□□□□ -0.36
TTC39A-207ENST00000411642 KIF16BQ96L93 1317 aa12.8□□□□□ -0.36
TTC39A-207ENST00000411642 DCAF8L1A6NGE4 600 aa12.79□□□□□ -0.36
TTC39A-207ENST00000411642 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
TTC39A-207ENST00000411642 GPR162Q16538 588 aa12.79□□□□□ -0.36
TTC39A-207ENST00000411642 RTL5Q5HYW3 569 aaPredicted RBP12.79□□□□□ -0.36
TTC39A-207ENST00000411642 PIM2Q9P1W9 311 aa12.79□□□□□ -0.36
TTC39A-207ENST00000411642 NOB1Q9ULX3 412 aaKnown RBP12.79□□□□□ -0.36
TTC39A-207ENST00000411642 KLRG2A4D1S0 409 aaPredicted RBP12.78□□□□□ -0.36
TTC39A-207ENST00000411642 BCAR3O75815 825 aa12.78□□□□□ -0.36
TTC39A-207ENST00000411642 PCCAP05165 728 aaPredicted RBP12.78□□□□□ -0.36
TTC39A-207ENST00000411642 SRGNP10124 158 aa12.78□□□□□ -0.36
TTC39A-207ENST00000411642 HCLS1P14317 486 aaPredicted RBP12.78□□□□□ -0.36
TTC39A-207ENST00000411642 SLC10A5Q5PT55 438 aa12.78□□□□□ -0.36
TTC39A-207ENST00000411642 BEND3Q5T5X7 828 aa12.78□□□□□ -0.36
TTC39A-207ENST00000411642 ZBTB38Q8NAP3 1195 aaPredicted RBP12.78□□□□□ -0.36
TTC39A-207ENST00000411642 ZNF622Q969S3 477 aaKnown RBP eCLIP12.78□□□□□ -0.36
TTC39A-207ENST00000411642 SPEF2Q9C093 1822 aa12.78□□□□□ -0.36
TTC39A-207ENST00000411642 CCDC88AQ3V6T2 1871 aa12.78□□□□□ -0.36
TTC39A-207ENST00000411642 YBX3P16989 372 aaKnown RBP eCLIP12.77□□□□□ -0.37
TTC39A-207ENST00000411642 GCKRQ14397 625 aa12.77□□□□□ -0.37
TTC39A-207ENST00000411642 CRY2Q49AN0 593 aa12.77□□□□□ -0.37
TTC39A-207ENST00000411642 DALRD3Q5D0E6 543 aaKnown RBP12.77□□□□□ -0.37
TTC39A-207ENST00000411642 C3orf67Q6ZVT6 689 aa12.77□□□□□ -0.37
TTC39A-207ENST00000411642 JARID2Q92833 1246 aaPredicted RBP12.77□□□□□ -0.37
TTC39A-207ENST00000411642 MASTLQ96GX5 879 aa12.77□□□□□ -0.37
TTC39A-207ENST00000411642 NLRP3Q96P20 1036 aa12.77□□□□□ -0.37
TTC39A-207ENST00000411642 BCS1LQ9Y276 419 aa12.77□□□□□ -0.37
TTC39A-207ENST00000411642 IRS4O14654 1257 aaPredicted RBP12.76□□□□□ -0.37
TTC39A-207ENST00000411642 NPR1P16066 1061 aa12.76□□□□□ -0.37
TTC39A-207ENST00000411642 STYK1Q6J9G0 422 aa12.76□□□□□ -0.37
TTC39A-207ENST00000411642 TTLL6Q8N841 843 aa12.76□□□□□ -0.37
TTC39A-207ENST00000411642 RPGRQ92834 1020 aaKnown RBP12.76□□□□□ -0.37
TTC39A-207ENST00000411642 FRAT1Q92837 279 aaPredicted RBP12.76□□□□□ -0.37
TTC39A-207ENST00000411642 API5Q9BZZ5 524 aaKnown RBP12.76□□□□□ -0.37
TTC39A-207ENST00000411642 SRCIN1Q9C0H9 1055 aa12.76□□□□□ -0.37
TTC39A-207ENST00000411642 SBF1O95248 1867 aa12.76□□□□□ -0.37
TTC39A-207ENST00000411642 FER1L6Q2WGJ9 1857 aa12.76□□□□□ -0.37
TTC39A-207ENST00000411642 ALDH1L1O75891 902 aa12.75□□□□□ -0.37
TTC39A-207ENST00000411642 HSP90B1P14625 803 aaKnown RBP12.75□□□□□ -0.37
TTC39A-207ENST00000411642 UBE3BQ7Z3V4 1068 aa12.75□□□□□ -0.37
TTC39A-207ENST00000411642 CNKSR1Q969H4 720 aa12.75□□□□□ -0.37
TTC39A-207ENST00000411642 CDHR2Q9BYE9 1310 aa12.75□□□□□ -0.37
TTC39A-207ENST00000411642 H7C1W4 665 aa12.74□□□□□ -0.37
TTC39A-207ENST00000411642 IPO8O15397 1037 aaKnown RBP12.74□□□□□ -0.37
TTC39A-207ENST00000411642 PRPF40BQ6NWY9 871 aaKnown RBP12.74□□□□□ -0.37
TTC39A-207ENST00000411642 ARHGAP45Q92619 1136 aa12.74□□□□□ -0.37
TTC39A-207ENST00000411642 GRM8O00222 908 aa12.73□□□□□ -0.37
TTC39A-207ENST00000411642 GRIN3BO60391 1043 aa12.73□□□□□ -0.37
TTC39A-207ENST00000411642 PDE8AO60658 829 aa12.73□□□□□ -0.37
TTC39A-207ENST00000411642 TRIM27P14373 513 aa12.73□□□□□ -0.37
TTC39A-207ENST00000411642 HOXA10P31260 410 aaPredicted RBP12.73□□□□□ -0.37
TTC39A-207ENST00000411642 ATF7IPQ6VMQ6 1270 aa12.73□□□□□ -0.37
TTC39A-207ENST00000411642 RBM17Q96I25 401 aaKnown RBP12.73□□□□□ -0.37
TTC39A-207ENST00000411642 C9orf78Q9NZ63 289 aaPredicted RBP12.73□□□□□ -0.37
TTC39A-207ENST00000411642 RCAN3Q9UKA8 241 aa12.73□□□□□ -0.37
TTC39A-207ENST00000411642 COL4A1P02462 1669 aa12.73□□□□□ -0.37
TTC39A-207ENST00000411642 ABCC4O15439 1325 aa12.72□□□□□ -0.37
TTC39A-207ENST00000411642 LRRC37AA6NMS7 1700 aa12.72□□□□□ -0.37
TTC39A-207ENST00000411642 ALDH1B1P30837 517 aa12.72□□□□□ -0.37
TTC39A-207ENST00000411642 CCT4P50991 539 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms