RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 NBPF6Q5VWK0 638 aa21.15■□□□□ 0.98
HCG11-201ENST00000411553 NBPF5PQ86XG9 351 aaPredicted RBP21.15■□□□□ 0.98
HCG11-201ENST00000411553 NBPF4Q96M43 638 aa21.15■□□□□ 0.98
HCG11-201ENST00000411553 HMG20BQ9P0W2 317 aa21.15■□□□□ 0.98
HCG11-201ENST00000411553 SHTN1A0MZ66 631 aa21.15■□□□□ 0.98
HCG11-201ENST00000411553 LRRC27Q9C0I9 530 aa21.15■□□□□ 0.98
HCG11-201ENST00000411553 ALS2CR12Q96Q35 445 aa21.15■□□□□ 0.98
HCG11-201ENST00000411553 KIF14Q15058 1648 aa21.15■□□□□ 0.98
HCG11-201ENST00000411553 GCOM1H8Y6P7 765 aaPredicted RBP21.15■□□□□ 0.98
HCG11-201ENST00000411553 MYZAPP0CAP1 466 aa21.15■□□□□ 0.98
HCG11-201ENST00000411553 IQGAP2Q13576 1575 aa21.15■□□□□ 0.98
HCG11-201ENST00000411553 SSFA2P28290 1259 aa21.15■□□□□ 0.98
HCG11-201ENST00000411553 TNNT1P13805 278 aa21.14■□□□□ 0.98
HCG11-201ENST00000411553 KANK3Q6NY19 840 aa21.14■□□□□ 0.98
HCG11-201ENST00000411553 SLC26A6Q9BXS9 759 aa21.14■□□□□ 0.98
HCG11-201ENST00000411553 STX1AQ16623 288 aa21.14■□□□□ 0.97
HCG11-201ENST00000411553 SLC4A8Q2Y0W8 1093 aa21.14■□□□□ 0.97
HCG11-201ENST00000411553 DRC1Q96MC2 740 aa21.14■□□□□ 0.97
HCG11-201ENST00000411553 TAOK3Q9H2K8 898 aa21.14■□□□□ 0.97
HCG11-201ENST00000411553 CADPS2Q86UW7 1296 aa21.13■□□□□ 0.97
HCG11-201ENST00000411553 MBIPQ9NS73 344 aa21.13■□□□□ 0.97
HCG11-201ENST00000411553 TFIP11Q9UBB9 837 aaKnown RBP21.13■□□□□ 0.97
HCG11-201ENST00000411553 STX6O43752 255 aa21.13■□□□□ 0.97
HCG11-201ENST00000411553 IL27Q8NEV9 243 aa21.13■□□□□ 0.97
HCG11-201ENST00000411553 NCOA1Q15788 1441 aa21.13■□□□□ 0.97
HCG11-201ENST00000411553 BIN1O00499 593 aa21.13■□□□□ 0.97
HCG11-201ENST00000411553 PRC1O43663 620 aa21.13■□□□□ 0.97
HCG11-201ENST00000411553 NEMFO60524 1076 aa21.12■□□□□ 0.97
HCG11-201ENST00000411553 STAMBPO95630 424 aa21.12■□□□□ 0.97
HCG11-201ENST00000411553 ANKRD13DQ6ZTN6 518 aa21.12■□□□□ 0.97
HCG11-201ENST00000411553 TMCO5BA8MYB1 307 aa21.12■□□□□ 0.97
HCG11-201ENST00000411553 NOS1P29475 1434 aa21.12■□□□□ 0.97
HCG11-201ENST00000411553 PANK2Q9BZ23 570 aa21.12■□□□□ 0.97
HCG11-201ENST00000411553 ACEP12821 1306 aa21.12■□□□□ 0.97
HCG11-201ENST00000411553 GSDMDP57764 484 aa21.12■□□□□ 0.97
HCG11-201ENST00000411553 CHRNA2Q15822 529 aa21.12■□□□□ 0.97
HCG11-201ENST00000411553 NAA15Q9BXJ9 866 aaKnown RBP21.12■□□□□ 0.97
HCG11-201ENST00000411553 SCAF11Q99590 1463 aaKnown RBP21.11■□□□□ 0.97
HCG11-201ENST00000411553 TBCAO75347 108 aaKnown RBP21.11■□□□□ 0.97
HCG11-201ENST00000411553 GOLGA6L10A0A0M3HER8 536 aa21.11■□□□□ 0.97
HCG11-201ENST00000411553 MCM5P33992 734 aa21.11■□□□□ 0.97
HCG11-201ENST00000411553 SMC1AQ14683 1233 aaKnown RBP21.11■□□□□ 0.97
HCG11-201ENST00000411553 CCDC102BQ68D86 513 aa21.1■□□□□ 0.97
HCG11-201ENST00000411553 TBC1D9Q6ZT07 1266 aa21.1■□□□□ 0.97
HCG11-201ENST00000411553 TMC6Q7Z403 805 aa21.1■□□□□ 0.97
HCG11-201ENST00000411553 RAB11FIP4Q86YS3 637 aa21.1■□□□□ 0.97
HCG11-201ENST00000411553 NBPF7P0C2Y1 421 aaPredicted RBP21.1■□□□□ 0.97
HCG11-201ENST00000411553 STX8Q9UNK0 236 aa21.1■□□□□ 0.97
HCG11-201ENST00000411553 ABCC5O15440 1437 aa21.1■□□□□ 0.97
HCG11-201ENST00000411553 ERICH4A6NGS2 130 aa21.1■□□□□ 0.97
HCG11-201ENST00000411553 PUF60Q9UHX1 559 aaKnown RBP21.1■□□□□ 0.97
HCG11-201ENST00000411553 FAM83GA6ND36 823 aa21.09■□□□□ 0.97
HCG11-201ENST00000411553 WTAPQ15007 396 aa21.09■□□□□ 0.97
HCG11-201ENST00000411553 CCDC174Q6PII3 467 aa21.09■□□□□ 0.97
HCG11-201ENST00000411553 ERMNQ8TAM6 284 aa21.09■□□□□ 0.97
HCG11-201ENST00000411553 TNPO1Q92973 898 aaKnown RBP21.09■□□□□ 0.97
HCG11-201ENST00000411553 BICD1Q96G01 975 aa21.09■□□□□ 0.97
HCG11-201ENST00000411553 TSPY3P0CV98 308 aa21.09■□□□□ 0.97
HCG11-201ENST00000411553 TSPY8P0CW00 308 aa21.09■□□□□ 0.97
HCG11-201ENST00000411553 BMP2KLQ5H9B9 411 aa21.09■□□□□ 0.97
HCG11-201ENST00000411553 JARID2Q92833 1246 aaPredicted RBP21.09■□□□□ 0.97
HCG11-201ENST00000411553 KRT23Q9C075 422 aa21.09■□□□□ 0.97
HCG11-201ENST00000411553 COMMD10Q9Y6G5 202 aa21.09■□□□□ 0.97
HCG11-201ENST00000411553 BCCIPQ9P287 314 aaKnown RBP eCLIP21.09■□□□□ 0.97
HCG11-201ENST00000411553 USP25Q9UHP3 1055 aa21.09■□□□□ 0.97
HCG11-201ENST00000411553 ZGPATQ8N5A5 531 aaKnown RBP21.09■□□□□ 0.97
HCG11-201ENST00000411553 NOP2P46087 812 aaKnown RBP21.08■□□□□ 0.97
HCG11-201ENST00000411553 TRAF1Q13077 416 aa21.08■□□□□ 0.97
HCG11-201ENST00000411553 SPECC1Q5M775 1068 aa21.08■□□□□ 0.97
HCG11-201ENST00000411553 C14orf93Q9H972 538 aaKnown RBP21.08■□□□□ 0.97
HCG11-201ENST00000411553 HMGXB3Q12766 1538 aa21.08■□□□□ 0.97
HCG11-201ENST00000411553 TRMT1Q9NXH9 659 aaKnown RBP21.08■□□□□ 0.97
HCG11-201ENST00000411553 PRPF4BQ13523 1007 aaKnown RBP21.08■□□□□ 0.96
HCG11-201ENST00000411553 PPP4R3BQ5MIZ7 849 aa21.08■□□□□ 0.96
HCG11-201ENST00000411553 TTC22Q5TAA0 569 aa21.08■□□□□ 0.96
HCG11-201ENST00000411553 FERMT1Q9BQL6 677 aa21.08■□□□□ 0.96
HCG11-201ENST00000411553 HDAC9Q9UKV0 1011 aa21.08■□□□□ 0.96
HCG11-201ENST00000411553 ZFYP08048 801 aaPredicted RBP21.08■□□□□ 0.96
HCG11-201ENST00000411553 HLTFQ14527 1009 aaKnown RBP eCLIP21.08■□□□□ 0.96
HCG11-201ENST00000411553 TMX1Q9H3N1 280 aa21.08■□□□□ 0.96
HCG11-201ENST00000411553 EXOC1Q9NV70 894 aa21.08■□□□□ 0.96
HCG11-201ENST00000411553 IL16Q14005 1332 aa21.07■□□□□ 0.96
HCG11-201ENST00000411553 PTPN23Q9H3S7 1636 aa21.07■□□□□ 0.96
HCG11-201ENST00000411553 SETDB2Q96T68 719 aa21.07■□□□□ 0.96
HCG11-201ENST00000411553 TBC1D2Q9BYX2 928 aa21.07■□□□□ 0.96
HCG11-201ENST00000411553 GDPD2Q9HCC8 539 aa21.07■□□□□ 0.96
HCG11-201ENST00000411553 CYP7A1P22680 504 aa21.07■□□□□ 0.96
HCG11-201ENST00000411553 UBE4AQ14139 1066 aa21.07■□□□□ 0.96
HCG11-201ENST00000411553 ZCRB1Q8TBF4 217 aaKnown RBP21.07■□□□□ 0.96
HCG11-201ENST00000411553 RMND1Q9NWS8 449 aa21.07■□□□□ 0.96
HCG11-201ENST00000411553 ANKRD36BQ8N2N9 1353 aa21.07■□□□□ 0.96
HCG11-201ENST00000411553 DENND4BO75064 1496 aaPredicted RBP21.07■□□□□ 0.96
HCG11-201ENST00000411553 PLB1Q6P1J6 1458 aa21.07■□□□□ 0.96
HCG11-201ENST00000411553 RHPN1Q8TCX5 695 aa21.06■□□□□ 0.96
HCG11-201ENST00000411553 DHX29Q7Z478 1369 aaKnown RBP21.06■□□□□ 0.96
HCG11-201ENST00000411553 ANXA1P04083 346 aa21.06■□□□□ 0.96
HCG11-201ENST00000411553 TSHZ3Q63HK5 1081 aa21.06■□□□□ 0.96
HCG11-201ENST00000411553 ZSCAN16Q9H4T2 348 aaPredicted RBP21.06■□□□□ 0.96
HCG11-201ENST00000411553 KLF18A0A0U1RQI7 1052 aa21.06■□□□□ 0.96
HCG11-201ENST00000411553 POTEB2H3BUK9 544 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms