RNA–Protein interactions for RNA: ENST00000410411.1

RN7SKP139-201, Transcript of RNA, 7SK small nuclear pseudogene 139, humanhuman

BASIC

Gene RN7SKP139, Length 293 nt, Biotype misc RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP139-201ENST00000410411 CCDC171Q6TFL3 1326 aa10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 CWC27Q6UX04 472 aaKnown RBP10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 UNC5CLQ8IV45 518 aa10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 VSIG10Q8N0Z9 540 aa10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 FAM184AQ8NB25 1140 aa10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 TMEM87AQ8NBN3 555 aa10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 SPEF2Q9C093 1822 aa10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 SMC3Q9UQE7 1217 aa10.2□□□□□ -0.78
RN7SKP139-201ENST00000410411 PRPF40AO75400 957 aaKnown RBP10.19□□□□□ -0.78
RN7SKP139-201ENST00000410411 SASH1O94885 1247 aa10.19□□□□□ -0.78
RN7SKP139-201ENST00000410411 IL2RBP14784 551 aa10.19□□□□□ -0.78
RN7SKP139-201ENST00000410411 TRIM28Q13263 835 aaKnown RBP10.19□□□□□ -0.78
RN7SKP139-201ENST00000410411 TSHZ3Q63HK5 1081 aa10.19□□□□□ -0.78
RN7SKP139-201ENST00000410411 RUFY3Q7L099 469 aa10.19□□□□□ -0.78
RN7SKP139-201ENST00000410411 LRP10Q7Z4F1 713 aa10.19□□□□□ -0.78
RN7SKP139-201ENST00000410411 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.19□□□□□ -0.78
RN7SKP139-201ENST00000410411 PPP1R9BQ96SB3 815 aa10.19□□□□□ -0.78
RN7SKP139-201ENST00000410411 MYD88Q99836 296 aa10.19□□□□□ -0.78
RN7SKP139-201ENST00000410411 PDRG1Q9NUG6 133 aa10.19□□□□□ -0.78
RN7SKP139-201ENST00000410411 CWC25Q9NXE8 425 aaPredicted RBP10.19□□□□□ -0.78
RN7SKP139-201ENST00000410411 H7C1W4 665 aa10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 CIAO1O76071 339 aa10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 ANXA1P04083 346 aa10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 ZSCAN22P10073 491 aaPredicted RBP10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 MYL6BP14649 208 aa10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 IL15P40933 162 aaPredicted RBP10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 NASPP49321 788 aaPredicted RBP10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 LRSAM1Q6UWE0 723 aa10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 ZGPATQ8N5A5 531 aaKnown RBP10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 EAF2Q96CJ1 260 aaPredicted RBP10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 KAZALD1Q96I82 304 aa10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 PRDM11Q9NQV5 511 aa10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 PALD1Q9ULE6 856 aa10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 ZDHHC9Q9Y397 364 aa10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 KIF3AQ9Y496 699 aa10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 U3KPZ7 1027 aaPredicted RBP10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 XIRP1Q702N8 1843 aaKnown RBP10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 PAPPAQ13219 1627 aa10.18□□□□□ -0.78
RN7SKP139-201ENST00000410411 A0A087WZG4 1122 aa10.17□□□□□ -0.78
RN7SKP139-201ENST00000410411 CASTP20810 708 aaKnown RBP10.17□□□□□ -0.78
RN7SKP139-201ENST00000410411 MCM5P33992 734 aa10.17□□□□□ -0.78
RN7SKP139-201ENST00000410411 CLCN1P35523 988 aa10.17□□□□□ -0.78
RN7SKP139-201ENST00000410411 SLC39A6Q13433 755 aa10.17□□□□□ -0.78
RN7SKP139-201ENST00000410411 UVSSAQ2YD98 709 aa10.17□□□□□ -0.78
RN7SKP139-201ENST00000410411 ZSCAN23Q3MJ62 389 aa10.17□□□□□ -0.78
RN7SKP139-201ENST00000410411 USPL1Q5W0Q7 1092 aa10.17□□□□□ -0.78
RN7SKP139-201ENST00000410411 TOM1L2Q6ZVM7 507 aa10.17□□□□□ -0.78
RN7SKP139-201ENST00000410411 BRINP3Q76B58 766 aa10.17□□□□□ -0.78
RN7SKP139-201ENST00000410411 FSD1Q9BTV5 496 aa10.17□□□□□ -0.78
RN7SKP139-201ENST00000410411 SLAIN2Q9P270 581 aa10.17□□□□□ -0.78
RN7SKP139-201ENST00000410411 AKAP2Q9Y2D5 859 aa10.17□□□□□ -0.78
RN7SKP139-201ENST00000410411 USP16Q9Y5T5 823 aa10.17□□□□□ -0.78
RN7SKP139-201ENST00000410411 ABCC12Q96J65 1359 aa10.16□□□□□ -0.78
RN7SKP139-201ENST00000410411 JCADQ9P266 1359 aa10.16□□□□□ -0.78
RN7SKP139-201ENST00000410411 STX6O43752 255 aa10.16□□□□□ -0.78
RN7SKP139-201ENST00000410411 AK2P54819 239 aa10.16□□□□□ -0.78
RN7SKP139-201ENST00000410411 PTPN12Q05209 780 aaKnown RBP10.16□□□□□ -0.78
RN7SKP139-201ENST00000410411 HSP90AB3PQ58FF7 597 aa10.16□□□□□ -0.78
RN7SKP139-201ENST00000410411 TNNI3KQ59H18 835 aa10.16□□□□□ -0.78
RN7SKP139-201ENST00000410411 CREB3L3Q68CJ9 461 aa10.16□□□□□ -0.78
RN7SKP139-201ENST00000410411 CAVIN1Q6NZI2 390 aaKnown RBP10.16□□□□□ -0.78
RN7SKP139-201ENST00000410411 BLOC1S2Q6QNY1 142 aa10.16□□□□□ -0.78
RN7SKP139-201ENST00000410411 RGS22Q8NE09 1264 aa10.16□□□□□ -0.78
RN7SKP139-201ENST00000410411 HAUS7Q99871 368 aa10.16□□□□□ -0.78
RN7SKP139-201ENST00000410411 HELLSQ9NRZ9 838 aa10.16□□□□□ -0.78
RN7SKP139-201ENST00000410411 FPGT-TNNI3KV9GXZ4 949 aa10.16□□□□□ -0.78
RN7SKP139-201ENST00000410411 STARD3NLO95772 234 aa10.15□□□□□ -0.78
RN7SKP139-201ENST00000410411 ZFYP08048 801 aaPredicted RBP10.15□□□□□ -0.78
RN7SKP139-201ENST00000410411 HSP90B1P14625 803 aaKnown RBP10.15□□□□□ -0.78
RN7SKP139-201ENST00000410411 RFX5P48382 616 aaPredicted RBP10.15□□□□□ -0.78
RN7SKP139-201ENST00000410411 CASP7P55210 303 aa10.15□□□□□ -0.78
RN7SKP139-201ENST00000410411 EVA1CP58658 441 aa10.15□□□□□ -0.78
RN7SKP139-201ENST00000410411 UBE2HP62256 183 aa10.15□□□□□ -0.78
RN7SKP139-201ENST00000410411 JAKMIP1Q96N16 626 aaKnown RBP10.15□□□□□ -0.78
RN7SKP139-201ENST00000410411 UPF3BQ9BZI7 483 aaKnown RBP10.15□□□□□ -0.78
RN7SKP139-201ENST00000410411 PA2G4Q9UQ80 394 aaKnown RBP10.15□□□□□ -0.78
RN7SKP139-201ENST00000410411 RBM8AQ9Y5S9 174 aaKnown RBP10.15□□□□□ -0.78
RN7SKP139-201ENST00000410411 NUP188Q5SRE5 1749 aa10.15□□□□□ -0.78
RN7SKP139-201ENST00000410411 COL5A2P05997 1499 aaPredicted RBP10.15□□□□□ -0.78
RN7SKP139-201ENST00000410411 TNS2Q63HR2 1409 aa10.15□□□□□ -0.79
RN7SKP139-201ENST00000410411 RPAP1Q9BWH6 1393 aaPredicted RBP10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 MED23Q9ULK4 1368 aa10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 SH3TC1Q8TE82 1336 aa10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 PRAMEF22A3QJZ6 481 aa10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 SLC27A2O14975 620 aa10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 MAP4K4O95819 1239 aaPredicted RBP10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 NMIQ13287 307 aaPredicted RBP10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 MCMDC2Q4G0Z9 681 aa10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 ATL3Q6DD88 541 aa10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 PRPF40BQ6NWY9 871 aaKnown RBP10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 UBE3BQ7Z3V4 1068 aa10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 KBTBD3Q8NAB2 608 aa10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 LLPHQ9BRT6 129 aaKnown RBP10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 PLA2G12BQ9BX93 195 aa10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 CCDC8Q9H0W5 538 aaPredicted RBP10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 DNAJC5Q9H3Z4 198 aa10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 PALLDQ8WX93 1383 aa10.14□□□□□ -0.79
RN7SKP139-201ENST00000410411 ESPNB1AK53 854 aa10.13□□□□□ -0.79
RN7SKP139-201ENST00000410411 SYT1P21579 422 aa10.13□□□□□ -0.79
RN7SKP139-201ENST00000410411 RPS6KB1P23443 525 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms