RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PSMD1Q99460 953 aa16.8■□□□□ 0.28
CHRNA1-205ENST00000409542 GTF2E1P29083 439 aaPredicted RBP16.8■□□□□ 0.28
CHRNA1-205ENST00000409542 PPP2R1AP30153 589 aa16.8■□□□□ 0.28
CHRNA1-205ENST00000409542 TAF7Q15545 349 aaPredicted RBP16.8■□□□□ 0.28
CHRNA1-205ENST00000409542 CRY2Q49AN0 593 aa16.8■□□□□ 0.28
CHRNA1-205ENST00000409542 TTLL7Q6ZT98 887 aa16.8■□□□□ 0.28
CHRNA1-205ENST00000409542 PNMA8AQ86V59 439 aaPredicted RBP16.8■□□□□ 0.28
CHRNA1-205ENST00000409542 NUDCQ9Y266 331 aa16.8■□□□□ 0.28
CHRNA1-205ENST00000409542 GJA3Q9Y6H8 435 aa16.8■□□□□ 0.28
CHRNA1-205ENST00000409542 NUP98P52948 1817 aa16.79■□□□□ 0.28
CHRNA1-205ENST00000409542 WDR33Q9C0J8 1336 aaKnown RBP16.79■□□□□ 0.28
CHRNA1-205ENST00000409542 EPS15P42566 896 aa16.79■□□□□ 0.28
CHRNA1-205ENST00000409542 DDX21Q9NR30 783 aaKnown RBP eCLIP16.78■□□□□ 0.28
CHRNA1-205ENST00000409542 UBN2Q6ZU65 1347 aa16.78■□□□□ 0.28
CHRNA1-205ENST00000409542 LAMB4A4D0S4 1761 aa16.77■□□□□ 0.28
CHRNA1-205ENST00000409542 HTATSF1O43719 755 aaKnown RBP16.77■□□□□ 0.28
CHRNA1-205ENST00000409542 GPTP24298 496 aa16.77■□□□□ 0.28
CHRNA1-205ENST00000409542 SCNN1DP51172 638 aa16.77■□□□□ 0.28
CHRNA1-205ENST00000409542 SUSD4Q5VX71 490 aa16.77■□□□□ 0.28
CHRNA1-205ENST00000409542 C3orf67Q6ZVT6 689 aa16.77■□□□□ 0.28
CHRNA1-205ENST00000409542 JDP2Q8WYK2 163 aa16.77■□□□□ 0.28
CHRNA1-205ENST00000409542 ABT1Q9ULW3 272 aaKnown RBP16.77■□□□□ 0.28
CHRNA1-205ENST00000409542 TCERG1O14776 1098 aaKnown RBP16.76■□□□□ 0.27
CHRNA1-205ENST00000409542 EIF6P56537 245 aaKnown RBP16.76■□□□□ 0.27
CHRNA1-205ENST00000409542 RRP7AQ9Y3A4 280 aaKnown RBP16.76■□□□□ 0.27
CHRNA1-205ENST00000409542 MAP3K15Q6ZN16 1313 aa16.76■□□□□ 0.27
CHRNA1-205ENST00000409542 ERVV-1B6SEH8 477 aa16.75■□□□□ 0.27
CHRNA1-205ENST00000409542 TRAF5O00463 557 aa16.75■□□□□ 0.27
CHRNA1-205ENST00000409542 HOXA10P31260 410 aaPredicted RBP16.75■□□□□ 0.27
CHRNA1-205ENST00000409542 CST9Q5W186 159 aa16.75■□□□□ 0.27
CHRNA1-205ENST00000409542 NYXQ9GZU5 481 aa16.75■□□□□ 0.27
CHRNA1-205ENST00000409542 DLG5Q8TDM6 1919 aa16.75■□□□□ 0.27
CHRNA1-205ENST00000409542 KDM3BQ7LBC6 1761 aa16.75■□□□□ 0.27
CHRNA1-205ENST00000409542 MYL6BP14649 208 aa16.74■□□□□ 0.27
CHRNA1-205ENST00000409542 EIF4A1P60842 406 aaKnown RBP16.74■□□□□ 0.27
CHRNA1-205ENST00000409542 CYP4F22Q6NT55 531 aa16.74■□□□□ 0.27
CHRNA1-205ENST00000409542 LARGE2Q8N3Y3 721 aa16.74■□□□□ 0.27
CHRNA1-205ENST00000409542 ABHD8Q96I13 439 aa16.74■□□□□ 0.27
CHRNA1-205ENST00000409542 ZBTB3Q9H5J0 574 aa16.74■□□□□ 0.27
CHRNA1-205ENST00000409542 RPGRQ92834 1020 aaKnown RBP16.73■□□□□ 0.27
CHRNA1-205ENST00000409542 THUMPD2Q9BTF0 503 aaKnown RBP16.73■□□□□ 0.27
CHRNA1-205ENST00000409542 NTSR2O95665 410 aa16.73■□□□□ 0.27
CHRNA1-205ENST00000409542 MAP2K1Q02750 393 aaPredicted RBP16.73■□□□□ 0.27
CHRNA1-205ENST00000409542 CC2D2BQ6DHV5 1058 aa16.73■□□□□ 0.27
CHRNA1-205ENST00000409542 ZNF34Q8IZ26 560 aa16.73■□□□□ 0.27
CHRNA1-205ENST00000409542 CAPNS2Q96L46 248 aa16.73■□□□□ 0.27
CHRNA1-205ENST00000409542 SUPT16HQ9Y5B9 1047 aaKnown RBP16.73■□□□□ 0.27
CHRNA1-205ENST00000409542 RIC1Q4ADV7 1423 aa16.72■□□□□ 0.27
CHRNA1-205ENST00000409542 PPEF1O14829 653 aaPredicted RBP16.72■□□□□ 0.27
CHRNA1-205ENST00000409542 LMOD1P29536 600 aaPredicted RBP16.72■□□□□ 0.27
CHRNA1-205ENST00000409542 GRM1Q13255 1194 aa16.72■□□□□ 0.27
CHRNA1-205ENST00000409542 CRAMP1Q96RY5 1269 aa16.72■□□□□ 0.27
CHRNA1-205ENST00000409542 THSD7BQ9C0I4 1608 aa16.71■□□□□ 0.27
CHRNA1-205ENST00000409542 TRPM7Q96QT4 1865 aa16.71■□□□□ 0.27
CHRNA1-205ENST00000409542 AOC2O75106 756 aa16.71■□□□□ 0.27
CHRNA1-205ENST00000409542 AOC3Q16853 763 aa16.71■□□□□ 0.27
CHRNA1-205ENST00000409542 KIF6Q6ZMV9 814 aa16.71■□□□□ 0.27
CHRNA1-205ENST00000409542 PAXIP1Q6ZW49 1069 aaPredicted RBP16.71■□□□□ 0.27
CHRNA1-205ENST00000409542 RBM17Q96I25 401 aaKnown RBP16.71■□□□□ 0.27
CHRNA1-205ENST00000409542 TSKSQ9UJT2 592 aa16.71■□□□□ 0.27
CHRNA1-205ENST00000409542 FAM161AQ3B820 660 aa16.7■□□□□ 0.26
CHRNA1-205ENST00000409542 USP50Q70EL3 339 aaPredicted RBP16.7■□□□□ 0.26
CHRNA1-205ENST00000409542 GPR101Q96P66 508 aaPredicted RBP16.7■□□□□ 0.26
CHRNA1-205ENST00000409542 PLEKHF1Q96S99 279 aa16.7■□□□□ 0.26
CHRNA1-205ENST00000409542 IBTKQ9P2D0 1353 aaPredicted RBP16.7■□□□□ 0.26
CHRNA1-205ENST00000409542 PPIP5K2O43314 1243 aa16.69■□□□□ 0.26
CHRNA1-205ENST00000409542 GIGYF2Q6Y7W6 1299 aaKnown RBP16.69■□□□□ 0.26
CHRNA1-205ENST00000409542 NIM1KQ8IY84 436 aa16.69■□□□□ 0.26
CHRNA1-205ENST00000409542 PNISRQ8TF01 805 aaKnown RBP16.69■□□□□ 0.26
CHRNA1-205ENST00000409542 TLL2Q9Y6L7 1015 aa16.69■□□□□ 0.26
CHRNA1-205ENST00000409542 LRP10Q7Z4F1 713 aa16.68■□□□□ 0.26
CHRNA1-205ENST00000409542 CXCL9Q07325 125 aa16.67■□□□□ 0.26
CHRNA1-205ENST00000409542 PDIA6Q15084 440 aa16.67■□□□□ 0.26
CHRNA1-205ENST00000409542 GPRC5DQ9NZD1 345 aa16.67■□□□□ 0.26
CHRNA1-205ENST00000409542 ANXA1P04083 346 aa16.67■□□□□ 0.26
CHRNA1-205ENST00000409542 GRIPAP1Q4V328 841 aa16.67■□□□□ 0.26
CHRNA1-205ENST00000409542 GLIS2Q9BZE0 524 aaPredicted RBP16.67■□□□□ 0.26
CHRNA1-205ENST00000409542 ADARB2Q9NS39 739 aaKnown RBP16.67■□□□□ 0.26
CHRNA1-205ENST00000409542 ATP6V0A2Q9Y487 856 aa16.67■□□□□ 0.26
CHRNA1-205ENST00000409542 ABCC4O15439 1325 aa16.66■□□□□ 0.26
CHRNA1-205ENST00000409542 ECE1P42892 770 aa16.66■□□□□ 0.26
CHRNA1-205ENST00000409542 GMPSP49915 693 aaPredicted RBP16.66■□□□□ 0.26
CHRNA1-205ENST00000409542 PROSER3Q2NL68 480 aa16.66■□□□□ 0.26
CHRNA1-205ENST00000409542 NLRP3Q96P20 1036 aa16.66■□□□□ 0.26
CHRNA1-205ENST00000409542 SHTN1A0MZ66 631 aa16.65■□□□□ 0.26
CHRNA1-205ENST00000409542 CCDC85CA6NKD9 419 aa16.65■□□□□ 0.26
CHRNA1-205ENST00000409542 CELF2O95319 508 aaKnown RBP16.65■□□□□ 0.26
CHRNA1-205ENST00000409542 HIRAP54198 1017 aaPredicted RBP16.65■□□□□ 0.26
CHRNA1-205ENST00000409542 NFE2L2Q16236 605 aa16.65■□□□□ 0.26
CHRNA1-205ENST00000409542 SLC10A5Q5PT55 438 aa16.65■□□□□ 0.26
CHRNA1-205ENST00000409542 PPP1R42Q7Z4L9 355 aa16.65■□□□□ 0.26
CHRNA1-205ENST00000409542 RTFDC1Q9BY42 306 aaPredicted RBP16.65■□□□□ 0.26
CHRNA1-205ENST00000409542 PRKRIP1Q9H875 184 aaPredicted RBP16.65■□□□□ 0.26
CHRNA1-205ENST00000409542 EIF2S2P20042 333 aaKnown RBP16.64■□□□□ 0.25
CHRNA1-205ENST00000409542 SAPCD2Q86UD0 394 aa16.64■□□□□ 0.25
CHRNA1-205ENST00000409542 UTP14AQ9BVJ6 771 aaKnown RBP16.64■□□□□ 0.25
CHRNA1-205ENST00000409542 ZNRF3Q9ULT6 936 aa16.64■□□□□ 0.25
CHRNA1-205ENST00000409542 TAF1P21675 1872 aa16.63■□□□□ 0.25
CHRNA1-205ENST00000409542 LAMB2P55268 1798 aa16.63■□□□□ 0.25
CHRNA1-205ENST00000409542 RAD17O75943 681 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms