RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 HDAC5Q9UQL6 1122 aa18.4■□□□□ 0.54
SCAMP4-202ENST00000409472 PTPN12Q05209 780 aaKnown RBP18.4■□□□□ 0.54
SCAMP4-202ENST00000409472 NKX1-1Q15270 411 aaPredicted RBP18.4■□□□□ 0.54
SCAMP4-202ENST00000409472 PLBD2Q8NHP8 589 aa18.4■□□□□ 0.54
SCAMP4-202ENST00000409472 IL17RAQ96F46 866 aa18.4■□□□□ 0.54
SCAMP4-202ENST00000409472 SNX14Q9Y5W7 946 aa18.4■□□□□ 0.54
SCAMP4-202ENST00000409472 TNS2Q63HR2 1409 aa18.4■□□□□ 0.54
SCAMP4-202ENST00000409472 CPA1P15085 419 aa18.39■□□□□ 0.53
SCAMP4-202ENST00000409472 EVA1CP58658 441 aa18.39■□□□□ 0.53
SCAMP4-202ENST00000409472 FOXD4L5Q5VV16 416 aaPredicted RBP18.39■□□□□ 0.53
SCAMP4-202ENST00000409472 FOXD4L4Q8WXT5 416 aaPredicted RBP18.39■□□□□ 0.53
SCAMP4-202ENST00000409472 EDC3Q96F86 508 aaKnown RBP18.39■□□□□ 0.53
SCAMP4-202ENST00000409472 FAM227BQ96M60 508 aa18.39■□□□□ 0.53
SCAMP4-202ENST00000409472 BOLA2Q9H3K6 86 aa18.39■□□□□ 0.53
SCAMP4-202ENST00000409472 ZBTB3Q9H5J0 574 aa18.39■□□□□ 0.53
SCAMP4-202ENST00000409472 DIAPH3Q9NSV4 1193 aa18.39■□□□□ 0.53
SCAMP4-202ENST00000409472 NDUFB9Q9Y6M9 179 aa18.39■□□□□ 0.53
SCAMP4-202ENST00000409472 ERVV-2B6SEH9 535 aa18.39■□□□□ 0.53
SCAMP4-202ENST00000409472 LARP6Q9BRS8 491 aaKnown RBP18.39■□□□□ 0.53
SCAMP4-202ENST00000409472 RABL6Q3YEC7 729 aaPredicted RBP18.38■□□□□ 0.53
SCAMP4-202ENST00000409472 FSD2A1L4K1 749 aa18.38■□□□□ 0.53
SCAMP4-202ENST00000409472 GPATCH3Q96I76 525 aa18.38■□□□□ 0.53
SCAMP4-202ENST00000409472 TFCP2Q12800 502 aa18.37■□□□□ 0.53
SCAMP4-202ENST00000409472 COL9A3Q14050 684 aaPredicted RBP18.37■□□□□ 0.53
SCAMP4-202ENST00000409472 CLEC17AQ6ZS10 378 aa18.37■□□□□ 0.53
SCAMP4-202ENST00000409472 DBNLQ9UJU6 430 aaKnown RBP18.37■□□□□ 0.53
SCAMP4-202ENST00000409472 COPRSQ9NQ92 184 aa18.37■□□□□ 0.53
SCAMP4-202ENST00000409472 BTG4Q9NY30 223 aa18.37■□□□□ 0.53
SCAMP4-202ENST00000409472 DTNBO60941 627 aa18.36■□□□□ 0.53
SCAMP4-202ENST00000409472 CHGBP05060 677 aa18.36■□□□□ 0.53
SCAMP4-202ENST00000409472 MCTP1Q6DN14 999 aa18.36■□□□□ 0.53
SCAMP4-202ENST00000409472 PANK2Q9BZ23 570 aa18.36■□□□□ 0.53
SCAMP4-202ENST00000409472 A0A0D9SFI3 127 aa18.35■□□□□ 0.53
SCAMP4-202ENST00000409472 NUCB2P80303 420 aa18.35■□□□□ 0.53
SCAMP4-202ENST00000409472 NMIQ13287 307 aaPredicted RBP18.35■□□□□ 0.53
SCAMP4-202ENST00000409472 CUL4AQ13619 759 aa18.35■□□□□ 0.53
SCAMP4-202ENST00000409472 LMBR1LQ6UX01 489 aa18.35■□□□□ 0.53
SCAMP4-202ENST00000409472 EVI5LQ96CN4 794 aa18.35■□□□□ 0.53
SCAMP4-202ENST00000409472 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-202ENST00000409472 FOXO4P98177 505 aa18.35■□□□□ 0.53
SCAMP4-202ENST00000409472 CWC22Q9HCG8 908 aaKnown RBP18.35■□□□□ 0.53
SCAMP4-202ENST00000409472 ASAP1Q9ULH1 1129 aa18.35■□□□□ 0.53
SCAMP4-202ENST00000409472 XRCC6P12956 609 aaKnown RBP eCLIP18.34■□□□□ 0.53
SCAMP4-202ENST00000409472 ADCK5Q3MIX3 580 aa18.34■□□□□ 0.53
SCAMP4-202ENST00000409472 ZNF330Q9Y3S2 320 aaPredicted RBP18.34■□□□□ 0.53
SCAMP4-202ENST00000409472 TNNI3KQ59H18 835 aa18.34■□□□□ 0.53
SCAMP4-202ENST00000409472 TTC14Q96N46 770 aa18.34■□□□□ 0.53
SCAMP4-202ENST00000409472 CHMP3Q9Y3E7 222 aa18.34■□□□□ 0.53
SCAMP4-202ENST00000409472 CCDC9Q9Y3X0 531 aaKnown RBP18.34■□□□□ 0.53
SCAMP4-202ENST00000409472 FPGT-TNNI3KV9GXZ4 949 aa18.34■□□□□ 0.53
SCAMP4-202ENST00000409472 ERBB4Q15303 1308 aa18.33■□□□□ 0.53
SCAMP4-202ENST00000409472 GOLGA6L3A6NEY3 463 aa18.33■□□□□ 0.53
SCAMP4-202ENST00000409472 PRPF40BQ6NWY9 871 aaKnown RBP18.33■□□□□ 0.53
SCAMP4-202ENST00000409472 KIAA1211Q6ZU35 1233 aa18.33■□□□□ 0.53
SCAMP4-202ENST00000409472 ITGB4P16144 1822 aa18.33■□□□□ 0.53
SCAMP4-202ENST00000409472 COL15A1P39059 1388 aa18.33■□□□□ 0.52
SCAMP4-202ENST00000409472 CLCN1P35523 988 aa18.33■□□□□ 0.52
SCAMP4-202ENST00000409472 GAS2L3Q86XJ1 694 aa18.33■□□□□ 0.52
SCAMP4-202ENST00000409472 H7C1W4 665 aa18.32■□□□□ 0.52
SCAMP4-202ENST00000409472 EPB41L2O43491 1005 aaKnown RBP18.32■□□□□ 0.52
SCAMP4-202ENST00000409472 MCM2P49736 904 aa18.32■□□□□ 0.52
SCAMP4-202ENST00000409472 AK2P54819 239 aa18.32■□□□□ 0.52
SCAMP4-202ENST00000409472 PIGBQ92521 554 aa18.32■□□□□ 0.52
SCAMP4-202ENST00000409472 DBNDD2Q9BQY9 259 aa18.32■□□□□ 0.52
SCAMP4-202ENST00000409472 FSD1Q9BTV5 496 aa18.32■□□□□ 0.52
SCAMP4-202ENST00000409472 TMOD3Q9NYL9 352 aa18.32■□□□□ 0.52
SCAMP4-202ENST00000409472 TAF6LQ9Y6J9 622 aa18.32■□□□□ 0.52
SCAMP4-202ENST00000409472 CCDC171Q6TFL3 1326 aa18.32■□□□□ 0.52
SCAMP4-202ENST00000409472 ROBO1Q9Y6N7 1651 aa18.32■□□□□ 0.52
SCAMP4-202ENST00000409472 COL16A1Q07092 1604 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-202ENST00000409472 LARGE1O95461 756 aa18.31■□□□□ 0.52
SCAMP4-202ENST00000409472 CASTP20810 708 aaKnown RBP18.31■□□□□ 0.52
SCAMP4-202ENST00000409472 RUFY3Q7L099 469 aa18.31■□□□□ 0.52
SCAMP4-202ENST00000409472 ZNF589Q86UQ0 364 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-202ENST00000409472 DNAJC10Q8IXB1 793 aa18.31■□□□□ 0.52
SCAMP4-202ENST00000409472 CWC25Q9NXE8 425 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-202ENST00000409472 KAT6BQ8WYB5 2073 aa18.31■□□□□ 0.52
SCAMP4-202ENST00000409472 ZNF594Q96JF6 807 aaPredicted RBP18.31■□□□□ 0.52
SCAMP4-202ENST00000409472 LMBRD1Q9NUN5 540 aa18.31■□□□□ 0.52
SCAMP4-202ENST00000409472 ATG9AQ7Z3C6 839 aa18.3■□□□□ 0.52
SCAMP4-202ENST00000409472 RUFY2Q8WXA3 655 aa18.3■□□□□ 0.52
SCAMP4-202ENST00000409472 RBM8AQ9Y5S9 174 aaKnown RBP18.3■□□□□ 0.52
SCAMP4-202ENST00000409472 DISP2A7MBM2 1401 aa18.29■□□□□ 0.52
SCAMP4-202ENST00000409472 JAKMIP1Q96N16 626 aaKnown RBP18.29■□□□□ 0.52
SCAMP4-202ENST00000409472 DDX49Q9Y6V7 483 aaKnown RBP18.29■□□□□ 0.52
SCAMP4-202ENST00000409472 MED23Q9ULK4 1368 aa18.29■□□□□ 0.52
SCAMP4-202ENST00000409472 NECTIN1Q15223 517 aa18.28■□□□□ 0.52
SCAMP4-202ENST00000409472 ATG3Q9NT62 314 aa18.28■□□□□ 0.52
SCAMP4-202ENST00000409472 GOLGA6L22H0YM25 854 aa18.28■□□□□ 0.52
SCAMP4-202ENST00000409472 BRD1O95696 1058 aa18.28■□□□□ 0.52
SCAMP4-202ENST00000409472 FOXD4L6Q3SYB3 417 aaPredicted RBP18.28■□□□□ 0.52
SCAMP4-202ENST00000409472 LRRC24Q50LG9 513 aa18.28■□□□□ 0.52
SCAMP4-202ENST00000409472 FOXD4L3Q6VB84 417 aaPredicted RBP18.28■□□□□ 0.52
SCAMP4-202ENST00000409472 RPAP1Q9BWH6 1393 aaPredicted RBP18.28■□□□□ 0.52
SCAMP4-202ENST00000409472 SLFNL1Q499Z3 407 aa18.27■□□□□ 0.52
SCAMP4-202ENST00000409472 INTS4Q96HW7 963 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-202ENST00000409472 SLC4A9Q96Q91 983 aa18.27■□□□□ 0.52
SCAMP4-202ENST00000409472 DNAJC2Q99543 621 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-202ENST00000409472 COL14A1Q05707 1796 aaKnown RBP18.27■□□□□ 0.52
SCAMP4-202ENST00000409472 PRPF40AO75400 957 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms