RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-206ENST00000409368 GPTP24298 496 aa16.75■□□□□ 0.27
SUMO1-206ENST00000409368 HOXA10P31260 410 aaPredicted RBP16.75■□□□□ 0.27
SUMO1-206ENST00000409368 TRIM28Q13263 835 aaKnown RBP16.75■□□□□ 0.27
SUMO1-206ENST00000409368 PPP1R42Q7Z4L9 355 aa16.75■□□□□ 0.27
SUMO1-206ENST00000409368 NECTIN2Q92692 538 aa16.75■□□□□ 0.27
SUMO1-206ENST00000409368 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.27
SUMO1-206ENST00000409368 SNED1Q8TER0 1413 aa16.74■□□□□ 0.27
SUMO1-206ENST00000409368 ERFEQ4G0M1 354 aa16.74■□□□□ 0.27
SUMO1-206ENST00000409368 SOGA3Q5TF21 947 aa16.74■□□□□ 0.27
SUMO1-206ENST00000409368 C9orf131Q5VYM1 1079 aa16.74■□□□□ 0.27
SUMO1-206ENST00000409368 PRPF40BQ6NWY9 871 aaKnown RBP16.74■□□□□ 0.27
SUMO1-206ENST00000409368 ANKRD13DQ6ZTN6 518 aa16.74■□□□□ 0.27
SUMO1-206ENST00000409368 NLRP10Q86W26 655 aa16.74■□□□□ 0.27
SUMO1-206ENST00000409368 LAMB2P55268 1798 aa16.74■□□□□ 0.27
SUMO1-206ENST00000409368 LMNB1P20700 586 aa16.73■□□□□ 0.27
SUMO1-206ENST00000409368 PRELPP51888 382 aa16.73■□□□□ 0.27
SUMO1-206ENST00000409368 NUTM1Q86Y26 1132 aa16.73■□□□□ 0.27
SUMO1-206ENST00000409368 TSPYL6Q8N831 410 aa16.73■□□□□ 0.27
SUMO1-206ENST00000409368 ISCA1Q9BUE6 129 aa16.73■□□□□ 0.27
SUMO1-206ENST00000409368 ZNF521Q96K83 1311 aa16.72■□□□□ 0.27
SUMO1-206ENST00000409368 GTF2E1P29083 439 aaPredicted RBP16.72■□□□□ 0.27
SUMO1-206ENST00000409368 ALDH1B1P30837 517 aa16.72■□□□□ 0.27
SUMO1-206ENST00000409368 AIMP1Q12904 312 aaKnown RBP16.72■□□□□ 0.27
SUMO1-206ENST00000409368 CCDC30Q5VVM6 783 aa16.72■□□□□ 0.27
SUMO1-206ENST00000409368 TSR2Q969E8 191 aaKnown RBP16.72■□□□□ 0.27
SUMO1-206ENST00000409368 UTP14AQ9BVJ6 771 aaKnown RBP16.72■□□□□ 0.27
SUMO1-206ENST00000409368 TIAM2Q8IVF5 1701 aa16.72■□□□□ 0.27
SUMO1-206ENST00000409368 FAM177BA6PVY3 158 aa16.71■□□□□ 0.27
SUMO1-206ENST00000409368 C21orf2O43822 256 aa16.71■□□□□ 0.27
SUMO1-206ENST00000409368 GPBP1L1Q9HC44 474 aaPredicted RBP16.71■□□□□ 0.27
SUMO1-206ENST00000409368 DDX60Q8IY21 1712 aaKnown RBP16.7■□□□□ 0.26
SUMO1-206ENST00000409368 CCER2I3L3R5 266 aa16.7■□□□□ 0.26
SUMO1-206ENST00000409368 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
SUMO1-206ENST00000409368 RASSF7Q02833 373 aa16.7■□□□□ 0.26
SUMO1-206ENST00000409368 CRAMP1Q96RY5 1269 aa16.7■□□□□ 0.26
SUMO1-206ENST00000409368 RNF181Q9P0P0 153 aa16.7■□□□□ 0.26
SUMO1-206ENST00000409368 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
SUMO1-206ENST00000409368 ELL2O00472 640 aaPredicted RBP16.69■□□□□ 0.26
SUMO1-206ENST00000409368 FAM9BQ8IZU0 186 aa16.69■□□□□ 0.26
SUMO1-206ENST00000409368 PHAXQ9H814 394 aaKnown RBP16.69■□□□□ 0.26
SUMO1-206ENST00000409368 C1QTNF8P60827 252 aa16.68■□□□□ 0.26
SUMO1-206ENST00000409368 TWISTNBQ3B726 338 aaPredicted RBP16.68■□□□□ 0.26
SUMO1-206ENST00000409368 GRIPAP1Q4V328 841 aa16.68■□□□□ 0.26
SUMO1-206ENST00000409368 CCDC93Q567U6 631 aa16.68■□□□□ 0.26
SUMO1-206ENST00000409368 CC2D2BQ6DHV5 1058 aa16.68■□□□□ 0.26
SUMO1-206ENST00000409368 C3orf67Q6ZVT6 689 aa16.68■□□□□ 0.26
SUMO1-206ENST00000409368 SH3TC1Q8TE82 1336 aa16.68■□□□□ 0.26
SUMO1-206ENST00000409368 KIF3CO14782 793 aa16.67■□□□□ 0.26
SUMO1-206ENST00000409368 GOLGA2Q08379 1002 aa16.67■□□□□ 0.26
SUMO1-206ENST00000409368 NLRP3Q96P20 1036 aa16.67■□□□□ 0.26
SUMO1-206ENST00000409368 TAOK3Q9H2K8 898 aa16.67■□□□□ 0.26
SUMO1-206ENST00000409368 VAMP4O75379 141 aa16.66■□□□□ 0.26
SUMO1-206ENST00000409368 RTKN2Q8IZC4 609 aa16.66■□□□□ 0.26
SUMO1-206ENST00000409368 RBM17Q96I25 401 aaKnown RBP16.66■□□□□ 0.26
SUMO1-206ENST00000409368 SPINK5Q9NQ38 1064 aaPredicted RBP16.66■□□□□ 0.26
SUMO1-206ENST00000409368 TRMT112Q9UI30 125 aaKnown RBP16.66■□□□□ 0.26
SUMO1-206ENST00000409368 RPGRQ92834 1020 aaKnown RBP16.65■□□□□ 0.26
SUMO1-206ENST00000409368 PSMD1Q99460 953 aa16.65■□□□□ 0.26
SUMO1-206ENST00000409368 KDM2BQ8NHM5 1336 aa16.65■□□□□ 0.26
SUMO1-206ENST00000409368 LRRC37AA6NMS7 1700 aa16.65■□□□□ 0.26
SUMO1-206ENST00000409368 WDR90Q96KV7 1748 aa16.65■□□□□ 0.26
SUMO1-206ENST00000409368 DDX58O95786 925 aaKnown RBP16.64■□□□□ 0.25
SUMO1-206ENST00000409368 FKBP4Q02790 459 aaKnown RBP eCLIP16.64■□□□□ 0.25
SUMO1-206ENST00000409368 SF3B3Q15393 1217 aaKnown RBP16.64■□□□□ 0.25
SUMO1-206ENST00000409368 POTEHQ6S545 545 aa16.64■□□□□ 0.25
SUMO1-206ENST00000409368 KSR2Q6VAB6 950 aa16.64■□□□□ 0.25
SUMO1-206ENST00000409368 RIC3Q7Z5B4 369 aa16.64■□□□□ 0.25
SUMO1-206ENST00000409368 SYNE4Q8N205 404 aa16.64■□□□□ 0.25
SUMO1-206ENST00000409368 CCDC191Q8NCU4 936 aa16.64■□□□□ 0.25
SUMO1-206ENST00000409368 METTL22Q9BUU2 404 aaPredicted RBP16.64■□□□□ 0.25
SUMO1-206ENST00000409368 STK31Q9BXU1 1019 aa16.64■□□□□ 0.25
SUMO1-206ENST00000409368 MYH16Q9H6N6 1097 aa16.64■□□□□ 0.25
SUMO1-206ENST00000409368 SENP3-EIF4A1A0A087X0R7 540 aa16.63■□□□□ 0.25
SUMO1-206ENST00000409368 GLTPD2A6NH11 291 aa16.63■□□□□ 0.25
SUMO1-206ENST00000409368 ATP5J2-PTCD1G3V325 749 aa16.62■□□□□ 0.25
SUMO1-206ENST00000409368 BBOX1O75936 387 aa16.62■□□□□ 0.25
SUMO1-206ENST00000409368 HCLS1P14317 486 aaPredicted RBP16.62■□□□□ 0.25
SUMO1-206ENST00000409368 EXOSC9Q06265 439 aaKnown RBP16.62■□□□□ 0.25
SUMO1-206ENST00000409368 ZBTB38Q8NAP3 1195 aaPredicted RBP16.62■□□□□ 0.25
SUMO1-206ENST00000409368 ZNF526Q8TF50 670 aaPredicted RBP16.62■□□□□ 0.25
SUMO1-206ENST00000409368 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
SUMO1-206ENST00000409368 TAF1P21675 1872 aa16.61■□□□□ 0.25
SUMO1-206ENST00000409368 PCCAP05165 728 aaPredicted RBP16.61■□□□□ 0.25
SUMO1-206ENST00000409368 OLFM4Q6UX06 510 aa16.61■□□□□ 0.25
SUMO1-206ENST00000409368 NMRK2Q9NPI5 230 aa16.61■□□□□ 0.25
SUMO1-206ENST00000409368 SALL2Q9Y467 1007 aaPredicted RBP16.61■□□□□ 0.25
SUMO1-206ENST00000409368 ATP6V0A2Q9Y487 856 aa16.61■□□□□ 0.25
SUMO1-206ENST00000409368 ABCC4O15439 1325 aa16.61■□□□□ 0.25
SUMO1-206ENST00000409368 CEP350Q5VT06 3117 aa16.61■□□□□ 0.25
SUMO1-206ENST00000409368 PI4KAP2A4QPH2 592 aa16.6■□□□□ 0.25
SUMO1-206ENST00000409368 PPEF1O14829 653 aaPredicted RBP16.6■□□□□ 0.25
SUMO1-206ENST00000409368 HSP90B1P14625 803 aaKnown RBP16.6■□□□□ 0.25
SUMO1-206ENST00000409368 G2E3Q7L622 706 aa16.6■□□□□ 0.25
SUMO1-206ENST00000409368 TMC4Q7Z404 712 aa16.6■□□□□ 0.25
SUMO1-206ENST00000409368 PI4KAP1Q8N8J0 262 aa16.6■□□□□ 0.25
SUMO1-206ENST00000409368 FAM89AQ96GI7 184 aa16.6■□□□□ 0.25
SUMO1-206ENST00000409368 VPS33BQ9H267 617 aa16.6■□□□□ 0.25
SUMO1-206ENST00000409368 MAP3K2Q9Y2U5 619 aa16.6■□□□□ 0.25
SUMO1-206ENST00000409368 MYH3P11055 1940 aa16.59■□□□□ 0.25
SUMO1-206ENST00000409368 TOMM70O94826 608 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms