RNA–Protein interactions for RNA: ENST00000409301.5

AVL9-202, Transcript of AVL9 cell migration associated, humanhuman

TSL 5 BASIC

Gene AVL9, Length 4,336 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AVL9-202ENST00000409301 SYNE3Q6ZMZ3 975 aa13.85□□□□□ -0.19
AVL9-202ENST00000409301 RALYLQ86SE5 291 aaKnown RBP13.85□□□□□ -0.19
AVL9-202ENST00000409301 TNNQ9UQP3 1299 aa13.85□□□□□ -0.19
AVL9-202ENST00000409301 GJA3Q9Y6H8 435 aa13.84□□□□□ -0.19
AVL9-202ENST00000409301 LMTK2Q8IWU2 1503 aa13.84□□□□□ -0.19
AVL9-202ENST00000409301 MARCH6O60337 910 aa13.84□□□□□ -0.19
AVL9-202ENST00000409301 VAMP4O75379 141 aa13.84□□□□□ -0.19
AVL9-202ENST00000409301 DZIP1Q86YF9 867 aaKnown RBP13.84□□□□□ -0.19
AVL9-202ENST00000409301 NYXQ9GZU5 481 aa13.84□□□□□ -0.19
AVL9-202ENST00000409301 PRAMEF22A3QJZ6 481 aa13.84□□□□□ -0.19
AVL9-202ENST00000409301 GRM8O00222 908 aa13.84□□□□□ -0.19
AVL9-202ENST00000409301 SSFA2P28290 1259 aa13.84□□□□□ -0.19
AVL9-202ENST00000409301 CRKLP46109 303 aaKnown RBP13.84□□□□□ -0.19
AVL9-202ENST00000409301 TTLL7Q6ZT98 887 aa13.84□□□□□ -0.19
AVL9-202ENST00000409301 FRMPD1Q5SYB0 1578 aa13.84□□□□□ -0.19
AVL9-202ENST00000409301 IGHDP01880 384 aa13.83□□□□□ -0.19
AVL9-202ENST00000409301 SPHKAPQ2M3C7 1700 aa13.83□□□□□ -0.19
AVL9-202ENST00000409301 AKAP17AQ02040 695 aaKnown RBP13.83□□□□□ -0.2
AVL9-202ENST00000409301 CNTROBQ8N137 903 aa13.83□□□□□ -0.2
AVL9-202ENST00000409301 H0YIN7 160 aa13.83□□□□□ -0.2
AVL9-202ENST00000409301 RBM25P49756 843 aaKnown RBP13.83□□□□□ -0.2
AVL9-202ENST00000409301 IRX3P78415 501 aaPredicted RBP13.83□□□□□ -0.2
AVL9-202ENST00000409301 SKIDA1Q1XH10 827 aa13.83□□□□□ -0.2
AVL9-202ENST00000409301 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
AVL9-202ENST00000409301 PA2G4Q9UQ80 394 aaKnown RBP13.83□□□□□ -0.2
AVL9-202ENST00000409301 SH3TC1Q8TE82 1336 aa13.82□□□□□ -0.2
AVL9-202ENST00000409301 SLC5A1P13866 664 aa13.82□□□□□ -0.2
AVL9-202ENST00000409301 R3HDM1Q15032 1099 aaKnown RBP13.82□□□□□ -0.2
AVL9-202ENST00000409301 LINS1Q8NG48 757 aa13.82□□□□□ -0.2
AVL9-202ENST00000409301 GOLGA6L6A8MZA4 724 aa13.82□□□□□ -0.2
AVL9-202ENST00000409301 ZBTB22O15209 634 aa13.82□□□□□ -0.2
AVL9-202ENST00000409301 RPAP2Q8IXW5 612 aaPredicted RBP13.82□□□□□ -0.2
AVL9-202ENST00000409301 ZFP91Q96JP5 570 aaPredicted RBP13.82□□□□□ -0.2
AVL9-202ENST00000409301 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.82□□□□□ -0.2
AVL9-202ENST00000409301 EIF4A1P60842 406 aaKnown RBP13.81□□□□□ -0.2
AVL9-202ENST00000409301 ZNF526Q8TF50 670 aaPredicted RBP13.81□□□□□ -0.2
AVL9-202ENST00000409301 IGSF1Q8N6C5 1336 aa13.81□□□□□ -0.2
AVL9-202ENST00000409301 FOSBP53539 338 aa13.81□□□□□ -0.2
AVL9-202ENST00000409301 RBM27Q9P2N5 1060 aaKnown RBP13.81□□□□□ -0.2
AVL9-202ENST00000409301 SRP68Q9UHB9 627 aaKnown RBP13.81□□□□□ -0.2
AVL9-202ENST00000409301 IL16Q14005 1332 aa13.81□□□□□ -0.2
AVL9-202ENST00000409301 LETM1O95202 739 aaPredicted RBP13.81□□□□□ -0.2
AVL9-202ENST00000409301 AKAP2Q9Y2D5 859 aa13.81□□□□□ -0.2
AVL9-202ENST00000409301 THRAP3Q9Y2W1 955 aaKnown RBP13.81□□□□□ -0.2
AVL9-202ENST00000409301 PTPRCP08575 1304 aa13.81□□□□□ -0.2
AVL9-202ENST00000409301 SOS2Q07890 1332 aaPredicted RBP13.81□□□□□ -0.2
AVL9-202ENST00000409301 ERICH2A1L162 156 aa13.81□□□□□ -0.2
AVL9-202ENST00000409301 CHL1O00533 1208 aa13.81□□□□□ -0.2
AVL9-202ENST00000409301 ATP7BP35670 1465 aa13.8□□□□□ -0.2
AVL9-202ENST00000409301 ECM2O94769 699 aaPredicted RBP13.8□□□□□ -0.2
AVL9-202ENST00000409301 VPS72Q15906 364 aa13.8□□□□□ -0.2
AVL9-202ENST00000409301 TSHZ3Q63HK5 1081 aa13.8□□□□□ -0.2
AVL9-202ENST00000409301 GAS2L3Q86XJ1 694 aa13.8□□□□□ -0.2
AVL9-202ENST00000409301 CPLX1O14810 134 aa13.8□□□□□ -0.2
AVL9-202ENST00000409301 GIGYF1O75420 1035 aaPredicted RBP13.8□□□□□ -0.2
AVL9-202ENST00000409301 TAF3Q5VWG9 929 aa13.8□□□□□ -0.2
AVL9-202ENST00000409301 ARHGAP27Q6ZUM4 889 aa13.8□□□□□ -0.2
AVL9-202ENST00000409301 TDO2P48775 406 aa13.79□□□□□ -0.2
AVL9-202ENST00000409301 TXNRD1Q16881 649 aa13.79□□□□□ -0.2
AVL9-202ENST00000409301 KIF1BPQ96EK5 621 aa13.79□□□□□ -0.2
AVL9-202ENST00000409301 REC8O95072 547 aa13.79□□□□□ -0.2
AVL9-202ENST00000409301 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.79□□□□□ -0.22e-6■■■□□ 16.7
AVL9-202ENST00000409301 GPATCH11Q8N954 259 aa13.79□□□□□ -0.2
AVL9-202ENST00000409301 RASSF8Q8NHQ8 419 aa13.79□□□□□ -0.2
AVL9-202ENST00000409301 USP5P45974 858 aa13.78□□□□□ -0.2
AVL9-202ENST00000409301 KLHDC4Q8TBB5 520 aa13.78□□□□□ -0.2
AVL9-202ENST00000409301 MINDY4BA8MYZ0 360 aa13.78□□□□□ -0.2
AVL9-202ENST00000409301 CCAR2Q8N163 923 aaKnown RBP13.78□□□□□ -0.2
AVL9-202ENST00000409301 OGFOD1Q8N543 542 aa13.78□□□□□ -0.2
AVL9-202ENST00000409301 NKTRP30414 1462 aaKnown RBP13.78□□□□□ -0.2
AVL9-202ENST00000409301 ST18O60284 1047 aa13.78□□□□□ -0.2
AVL9-202ENST00000409301 RNF20Q5VTR2 975 aa13.78□□□□□ -0.2
AVL9-202ENST00000409301 CRACR2BQ8N4Y2 399 aaPredicted RBP13.78□□□□□ -0.2
AVL9-202ENST00000409301 PALLDQ8WX93 1383 aa13.78□□□□□ -0.2
AVL9-202ENST00000409301 ILDR1Q86SU0 546 aaPredicted RBP13.78□□□□□ -0.2
AVL9-202ENST00000409301 C16orf71Q8IYS4 520 aaPredicted RBP13.78□□□□□ -0.2
AVL9-202ENST00000409301 NLGN1Q8N2Q7 840 aa13.78□□□□□ -0.2
AVL9-202ENST00000409301 GCC1Q96CN9 775 aa13.78□□□□□ -0.2
AVL9-202ENST00000409301 CWC27Q6UX04 472 aaKnown RBP13.77□□□□□ -0.2
AVL9-202ENST00000409301 FLAD1Q8NFF5 587 aa13.77□□□□□ -0.2
AVL9-202ENST00000409301 PLBD2Q8NHP8 589 aa13.77□□□□□ -0.2
AVL9-202ENST00000409301 AIDAQ96BJ3 306 aa13.77□□□□□ -0.2
AVL9-202ENST00000409301 GTPBP4Q9BZE4 634 aaKnown RBP13.77□□□□□ -0.2
AVL9-202ENST00000409301 MPHOSPH10O00566 681 aaKnown RBP13.77□□□□□ -0.21
AVL9-202ENST00000409301 NUCB2P80303 420 aa13.77□□□□□ -0.21
AVL9-202ENST00000409301 LARGE2Q8N3Y3 721 aa13.77□□□□□ -0.21
AVL9-202ENST00000409301 MRPL50Q8N5N7 158 aaKnown RBP13.77□□□□□ -0.21
AVL9-202ENST00000409301 ZBTB9Q96C00 473 aa13.77□□□□□ -0.21
AVL9-202ENST00000409301 PTCH1Q13635 1447 aa13.77□□□□□ -0.21
AVL9-202ENST00000409301 MMP10P09238 476 aa13.77□□□□□ -0.21
AVL9-202ENST00000409301 TNNT1P13805 278 aa13.77□□□□□ -0.21
AVL9-202ENST00000409301 U2AF2P26368 475 aaKnown RBP eCLIP13.77□□□□□ -0.219e-7■■■□□ 18.5
AVL9-202ENST00000409301 ZNF594Q96JF6 807 aaPredicted RBP13.77□□□□□ -0.21
AVL9-202ENST00000409301 TBC1D32Q96NH3 1257 aa13.77□□□□□ -0.21
AVL9-202ENST00000409301 ZNF408Q9H9D4 720 aa13.77□□□□□ -0.21
AVL9-202ENST00000409301 NPC1L1Q9UHC9 1359 aa13.77□□□□□ -0.21
AVL9-202ENST00000409301 PATL2C9JE40 543 aaKnown RBP13.76□□□□□ -0.21
AVL9-202ENST00000409301 ATP2B3Q16720 1220 aa13.76□□□□□ -0.21
AVL9-202ENST00000409301 MARCH10Q8NA82 808 aaPredicted RBP13.76□□□□□ -0.21
AVL9-202ENST00000409301 AATKQ6ZMQ8 1374 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms