RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 ZNF219Q9P2Y4 722 aaPredicted RBP23.05■■□□□ 1.28
PDLIM2-206ENST00000409141 TRMT112Q9UI30 125 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-206ENST00000409141 DLEC1Q9Y238 1755 aa23.04■■□□□ 1.28
PDLIM2-206ENST00000409141 ARFGEF1Q9Y6D6 1849 aa23.04■■□□□ 1.28
PDLIM2-206ENST00000409141 ZNF784Q8NCA9 323 aaPredicted RBP23.03■■□□□ 1.28
PDLIM2-206ENST00000409141 ZNF428Q96B54 188 aa23.03■■□□□ 1.28
PDLIM2-206ENST00000409141 ISCA1Q9BUE6 129 aa23.03■■□□□ 1.28
PDLIM2-206ENST00000409141 RNF123Q5XPI4 1314 aa23.02■■□□□ 1.28
PDLIM2-206ENST00000409141 COL11A2P13942 1736 aaPredicted RBP23.02■■□□□ 1.28
PDLIM2-206ENST00000409141 C21orf2O43822 256 aa23.02■■□□□ 1.28
PDLIM2-206ENST00000409141 SLC10A5Q5PT55 438 aa23.02■■□□□ 1.28
PDLIM2-206ENST00000409141 PRPF40BQ6NWY9 871 aaKnown RBP23.02■■□□□ 1.28
PDLIM2-206ENST00000409141 E9PSI1 815 aa23.01■■□□□ 1.27
PDLIM2-206ENST00000409141 CRY2Q49AN0 593 aa23.01■■□□□ 1.27
PDLIM2-206ENST00000409141 G2E3Q7L622 706 aa23.01■■□□□ 1.27
PDLIM2-206ENST00000409141 NLRP3Q96P20 1036 aa23.01■■□□□ 1.27
PDLIM2-206ENST00000409141 ALDH1B1P30837 517 aa23■■□□□ 1.27
PDLIM2-206ENST00000409141 TRIM28Q13263 835 aaKnown RBP23■■□□□ 1.27
PDLIM2-206ENST00000409141 KSR2Q6VAB6 950 aa23■■□□□ 1.27
PDLIM2-206ENST00000409141 SYNE4Q8N205 404 aa23■■□□□ 1.27
PDLIM2-206ENST00000409141 MYD88Q99836 296 aa23■■□□□ 1.27
PDLIM2-206ENST00000409141 SH3TC1Q8TE82 1336 aa23■■□□□ 1.27
PDLIM2-206ENST00000409141 RIC1Q4ADV7 1423 aa22.99■■□□□ 1.27
PDLIM2-206ENST00000409141 PI4KAP2A4QPH2 592 aa22.99■■□□□ 1.27
PDLIM2-206ENST00000409141 PI4KAP1Q8N8J0 262 aa22.99■■□□□ 1.27
PDLIM2-206ENST00000409141 RPGRQ92834 1020 aaKnown RBP22.99■■□□□ 1.27
PDLIM2-206ENST00000409141 MAP3K2Q9Y2U5 619 aa22.99■■□□□ 1.27
PDLIM2-206ENST00000409141 ANKRD36CQ5JPF3 1778 aa22.99■■□□□ 1.27
PDLIM2-206ENST00000409141 HCLS1P14317 486 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-206ENST00000409141 SLFN5Q08AF3 891 aa22.98■■□□□ 1.27
PDLIM2-206ENST00000409141 METTL22Q9BUU2 404 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-206ENST00000409141 C9orf131Q5VYM1 1079 aa22.98■■□□□ 1.27
PDLIM2-206ENST00000409141 C3orf67Q6ZVT6 689 aa22.98■■□□□ 1.27
PDLIM2-206ENST00000409141 RBM17Q96I25 401 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-206ENST00000409141 RASSF7Q02833 373 aa22.97■■□□□ 1.27
PDLIM2-206ENST00000409141 FLIIQ13045 1269 aa22.97■■□□□ 1.27
PDLIM2-206ENST00000409141 FAM89AQ96GI7 184 aa22.97■■□□□ 1.27
PDLIM2-206ENST00000409141 CDCA7LQ96GN5 454 aa22.97■■□□□ 1.27
PDLIM2-206ENST00000409141 TNRC6CQ9HCJ0 1690 aaKnown RBP22.96■■□□□ 1.27
PDLIM2-206ENST00000409141 ARFGEF2Q9Y6D5 1785 aa22.96■■□□□ 1.27
PDLIM2-206ENST00000409141 HOXA10P31260 410 aaPredicted RBP22.96■■□□□ 1.27
PDLIM2-206ENST00000409141 SOGA3Q5TF21 947 aa22.96■■□□□ 1.27
PDLIM2-206ENST00000409141 SLX4Q8IY92 1834 aa22.95■■□□□ 1.27
PDLIM2-206ENST00000409141 FKBP5Q13451 457 aaPredicted RBP22.95■■□□□ 1.26
PDLIM2-206ENST00000409141 RTL5Q5HYW3 569 aaPredicted RBP22.95■■□□□ 1.26
PDLIM2-206ENST00000409141 CCDC191Q8NCU4 936 aa22.95■■□□□ 1.26
PDLIM2-206ENST00000409141 C7orf43Q8WVR3 580 aa22.95■■□□□ 1.26
PDLIM2-206ENST00000409141 RNF181Q9P0P0 153 aa22.95■■□□□ 1.26
PDLIM2-206ENST00000409141 NFKBIEO00221 500 aa22.94■■□□□ 1.26
PDLIM2-206ENST00000409141 NEXNQ0ZGT2 675 aa22.94■■□□□ 1.26
PDLIM2-206ENST00000409141 CRAMP1Q96RY5 1269 aa22.94■■□□□ 1.26
PDLIM2-206ENST00000409141 ADCY9O60503 1353 aa22.94■■□□□ 1.26
PDLIM2-206ENST00000409141 CWC25Q9NXE8 425 aaPredicted RBP22.93■■□□□ 1.26
PDLIM2-206ENST00000409141 LMNB1P20700 586 aa22.92■■□□□ 1.26
PDLIM2-206ENST00000409141 ZBTB38Q8NAP3 1195 aaPredicted RBP22.92■■□□□ 1.26
PDLIM2-206ENST00000409141 CCDC93Q567U6 631 aa22.92■■□□□ 1.26
PDLIM2-206ENST00000409141 IRS4O14654 1257 aaPredicted RBP22.91■■□□□ 1.26
PDLIM2-206ENST00000409141 IGKV5-2P06315 115 aa22.91■■□□□ 1.26
PDLIM2-206ENST00000409141 OLFM4Q6UX06 510 aa22.91■■□□□ 1.26
PDLIM2-206ENST00000409141 ZNF526Q8TF50 670 aaPredicted RBP22.91■■□□□ 1.26
PDLIM2-206ENST00000409141 TAOK3Q9H2K8 898 aa22.91■■□□□ 1.26
PDLIM2-206ENST00000409141 CACNA1SQ13698 1873 aa22.91■■□□□ 1.26
PDLIM2-206ENST00000409141 PCCAP05165 728 aaPredicted RBP22.9■■□□□ 1.26
PDLIM2-206ENST00000409141 PRELPP51888 382 aa22.9■■□□□ 1.26
PDLIM2-206ENST00000409141 TRMT2AQ8IZ69 625 aaKnown RBP22.9■■□□□ 1.26
PDLIM2-206ENST00000409141 DNAAF4Q8WXU2 420 aa22.9■■□□□ 1.26
PDLIM2-206ENST00000409141 DDX46Q7L014 1031 aaKnown RBP22.89■■□□□ 1.25
PDLIM2-206ENST00000409141 RTKN2Q8IZC4 609 aa22.89■■□□□ 1.25
PDLIM2-206ENST00000409141 JARID2Q92833 1246 aaPredicted RBP22.89■■□□□ 1.25
PDLIM2-206ENST00000409141 GPBP1L1Q9HC44 474 aaPredicted RBP22.89■■□□□ 1.25
PDLIM2-206ENST00000409141 CACNA1FO60840 1977 aa22.89■■□□□ 1.25
PDLIM2-206ENST00000409141 LTBP3Q9NS15 1303 aa22.88■■□□□ 1.25
PDLIM2-206ENST00000409141 PPEF1O14829 653 aaPredicted RBP22.88■■□□□ 1.25
PDLIM2-206ENST00000409141 HSP90B1P14625 803 aaKnown RBP22.88■■□□□ 1.25
PDLIM2-206ENST00000409141 CWF19L2Q2TBE0 894 aaKnown RBP22.88■■□□□ 1.25
PDLIM2-206ENST00000409141 ABCC4O15439 1325 aa22.87■■□□□ 1.25
PDLIM2-206ENST00000409141 NEURL1BA8MQ27 555 aa22.87■■□□□ 1.25
PDLIM2-206ENST00000409141 CC2D2BQ6DHV5 1058 aa22.87■■□□□ 1.25
PDLIM2-206ENST00000409141 HNRNPUQ00839 825 aaKnown RBP eCLIP22.86■■□□□ 1.25
PDLIM2-206ENST00000409141 SF3B3Q15393 1217 aaKnown RBP22.86■■□□□ 1.25
PDLIM2-206ENST00000409141 TMX4Q9H1E5 349 aaPredicted RBP22.86■■□□□ 1.25
PDLIM2-206ENST00000409141 SBF1O95248 1867 aa22.86■■□□□ 1.25
PDLIM2-206ENST00000409141 F6X3S4 739 aa22.85■■□□□ 1.25
PDLIM2-206ENST00000409141 BBOX1O75936 387 aa22.85■■□□□ 1.25
PDLIM2-206ENST00000409141 FKBP4Q02790 459 aaKnown RBP eCLIP22.85■■□□□ 1.25
PDLIM2-206ENST00000409141 LINS1Q8NG48 757 aa22.85■■□□□ 1.25
PDLIM2-206ENST00000409141 FER1L6Q2WGJ9 1857 aa22.85■■□□□ 1.25
PDLIM2-206ENST00000409141 MRPL50Q8N5N7 158 aaKnown RBP22.85■■□□□ 1.25
PDLIM2-206ENST00000409141 PDE8AO60658 829 aa22.84■■□□□ 1.25
PDLIM2-206ENST00000409141 GRAPQ13588 217 aa22.84■■□□□ 1.25
PDLIM2-206ENST00000409141 GRAPLQ8TC17 118 aaPredicted RBP22.84■■□□□ 1.25
PDLIM2-206ENST00000409141 GCKRQ14397 625 aa22.83■■□□□ 1.25
PDLIM2-206ENST00000409141 GRIPAP1Q4V328 841 aa22.83■■□□□ 1.25
PDLIM2-206ENST00000409141 SSH1Q8WYL5 1049 aa22.83■■□□□ 1.25
PDLIM2-206ENST00000409141 ATP6V0A2Q9Y487 856 aa22.83■■□□□ 1.25
PDLIM2-206ENST00000409141 LAMB2P55268 1798 aa22.82■■□□□ 1.24
PDLIM2-206ENST00000409141 CDHR2Q9BYE9 1310 aa22.82■■□□□ 1.24
PDLIM2-206ENST00000409141 DDX60Q8IY21 1712 aaKnown RBP22.82■■□□□ 1.24
PDLIM2-206ENST00000409141 ZNF277Q9NRM2 450 aaPredicted RBP22.82■■□□□ 1.24
PDLIM2-206ENST00000409141 ZC3H4Q9UPT8 1303 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms