RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 SUSD4Q5VX71 490 aa12.57□□□□□ -0.4
NIF3L1-202ENST00000409020 STYK1Q6J9G0 422 aa12.57□□□□□ -0.4
NIF3L1-202ENST00000409020 C3orf67Q6ZVT6 689 aa12.57□□□□□ -0.4
NIF3L1-202ENST00000409020 MBIPQ9NS73 344 aa12.57□□□□□ -0.4
NIF3L1-202ENST00000409020 SUPT16HQ9Y5B9 1047 aaKnown RBP12.57□□□□□ -0.4
NIF3L1-202ENST00000409020 LMNB1P20700 586 aa12.57□□□□□ -0.4
NIF3L1-202ENST00000409020 AIMP1Q12904 312 aaKnown RBP12.57□□□□□ -0.4
NIF3L1-202ENST00000409020 ZNF34Q8IZ26 560 aa12.57□□□□□ -0.4
NIF3L1-202ENST00000409020 XAGE3Q8WTP9 111 aa12.57□□□□□ -0.4
NIF3L1-202ENST00000409020 C7orf43Q8WVR3 580 aa12.57□□□□□ -0.4
NIF3L1-202ENST00000409020 CHPF2Q9P2E5 772 aa12.57□□□□□ -0.4
NIF3L1-202ENST00000409020 NTSR2O95665 410 aa12.56□□□□□ -0.4
NIF3L1-202ENST00000409020 ZNF853P0CG23 659 aa12.56□□□□□ -0.4
NIF3L1-202ENST00000409020 GIGYF2Q6Y7W6 1299 aaKnown RBP12.56□□□□□ -0.4
NIF3L1-202ENST00000409020 COPS6Q7L5N1 327 aa12.56□□□□□ -0.4
NIF3L1-202ENST00000409020 CNKSR1Q969H4 720 aa12.56□□□□□ -0.4
NIF3L1-202ENST00000409020 CFAP44Q96MT7 982 aa12.56□□□□□ -0.4
NIF3L1-202ENST00000409020 PDZRN3Q9UPQ7 1066 aa12.56□□□□□ -0.4
NIF3L1-202ENST00000409020 TIAM2Q8IVF5 1701 aa12.56□□□□□ -0.4
NIF3L1-202ENST00000409020 SPDYE4A6NLX3 237 aa12.55□□□□□ -0.4
NIF3L1-202ENST00000409020 CAPN15O75808 1086 aa12.55□□□□□ -0.4
NIF3L1-202ENST00000409020 NPR1P16066 1061 aa12.55□□□□□ -0.4
NIF3L1-202ENST00000409020 GTF2E1P29083 439 aaPredicted RBP12.55□□□□□ -0.4
NIF3L1-202ENST00000409020 POLA2Q14181 598 aa12.55□□□□□ -0.4
NIF3L1-202ENST00000409020 FER1L6Q2WGJ9 1857 aa12.55□□□□□ -0.4
NIF3L1-202ENST00000409020 ARFGEF2Q9Y6D5 1785 aa12.55□□□□□ -0.4
NIF3L1-202ENST00000409020 HDGFL1Q5TGJ6 251 aa12.54□□□□□ -0.4
NIF3L1-202ENST00000409020 SYNE4Q8N205 404 aa12.54□□□□□ -0.4
NIF3L1-202ENST00000409020 RRAGCQ9HB90 399 aa12.54□□□□□ -0.4
NIF3L1-202ENST00000409020 ELL2O00472 640 aaPredicted RBP12.54□□□□□ -0.4
NIF3L1-202ENST00000409020 CRY2Q49AN0 593 aa12.54□□□□□ -0.4
NIF3L1-202ENST00000409020 DUSP27Q5VZP5 1158 aa12.54□□□□□ -0.4
NIF3L1-202ENST00000409020 TAOK3Q9H2K8 898 aa12.54□□□□□ -0.4
NIF3L1-202ENST00000409020 DDX21Q9NR30 783 aaKnown RBP eCLIP12.54□□□□□ -0.4
NIF3L1-202ENST00000409020 FGD1P98174 961 aa12.53□□□□□ -0.4
NIF3L1-202ENST00000409020 NYXQ9GZU5 481 aa12.53□□□□□ -0.4
NIF3L1-202ENST00000409020 CCDC88AQ3V6T2 1871 aa12.53□□□□□ -0.4
NIF3L1-202ENST00000409020 C8orf58Q8NAV2 365 aa12.52□□□□□ -0.4
NIF3L1-202ENST00000409020 IFT57Q9NWB7 429 aa12.52□□□□□ -0.4
NIF3L1-202ENST00000409020 IBTKQ9P2D0 1353 aaPredicted RBP12.52□□□□□ -0.4
NIF3L1-202ENST00000409020 SNED1Q8TER0 1413 aa12.52□□□□□ -0.41
NIF3L1-202ENST00000409020 KDM2BQ8NHM5 1336 aa12.52□□□□□ -0.41
NIF3L1-202ENST00000409020 TOMM70O94826 608 aa12.51□□□□□ -0.41
NIF3L1-202ENST00000409020 HSPA6P17066 643 aa12.51□□□□□ -0.41
NIF3L1-202ENST00000409020 NLRP10Q86W26 655 aa12.51□□□□□ -0.41
NIF3L1-202ENST00000409020 TSR2Q969E8 191 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-202ENST00000409020 MRS2Q9HD23 443 aa12.51□□□□□ -0.41
NIF3L1-202ENST00000409020 ZNF277Q9NRM2 450 aaPredicted RBP12.51□□□□□ -0.41
NIF3L1-202ENST00000409020 LTBP3Q9NS15 1303 aa12.51□□□□□ -0.41
NIF3L1-202ENST00000409020 GLTPD2A6NH11 291 aa12.51□□□□□ -0.41
NIF3L1-202ENST00000409020 POTECB2RU33 542 aa12.51□□□□□ -0.41
NIF3L1-202ENST00000409020 TCERG1O14776 1098 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-202ENST00000409020 HOXB7P09629 217 aa12.51□□□□□ -0.41
NIF3L1-202ENST00000409020 HCLS1P14317 486 aaPredicted RBP12.51□□□□□ -0.41
NIF3L1-202ENST00000409020 CCDC93Q567U6 631 aa12.51□□□□□ -0.41
NIF3L1-202ENST00000409020 RIC1Q4ADV7 1423 aa12.5□□□□□ -0.41
NIF3L1-202ENST00000409020 ZC3H4Q9UPT8 1303 aaKnown RBP12.5□□□□□ -0.41
NIF3L1-202ENST00000409020 ANKRD36CQ5JPF3 1778 aa12.5□□□□□ -0.41
NIF3L1-202ENST00000409020 GNAI1P63096 354 aa12.5□□□□□ -0.41
NIF3L1-202ENST00000409020 PARP10Q53GL7 1025 aa12.5□□□□□ -0.41
NIF3L1-202ENST00000409020 TSPYL6Q8N831 410 aa12.5□□□□□ -0.41
NIF3L1-202ENST00000409020 UTP14AQ9BVJ6 771 aaKnown RBP12.5□□□□□ -0.41
NIF3L1-202ENST00000409020 PHAXQ9H814 394 aaKnown RBP12.5□□□□□ -0.41
NIF3L1-202ENST00000409020 DBF4Q9UBU7 674 aaPredicted RBP12.5□□□□□ -0.41
NIF3L1-202ENST00000409020 COL4A5P29400 1685 aa12.49□□□□□ -0.41
NIF3L1-202ENST00000409020 ATP5J2-PTCD1G3V325 749 aa12.49□□□□□ -0.41
NIF3L1-202ENST00000409020 ANP32CO43423 234 aa12.49□□□□□ -0.41
NIF3L1-202ENST00000409020 HOXA10P31260 410 aaPredicted RBP12.49□□□□□ -0.41
NIF3L1-202ENST00000409020 HTRA3P83110 453 aa12.49□□□□□ -0.41
NIF3L1-202ENST00000409020 TCIRG1Q13488 830 aa12.49□□□□□ -0.41
NIF3L1-202ENST00000409020 PPP1R42Q7Z4L9 355 aa12.49□□□□□ -0.41
NIF3L1-202ENST00000409020 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
NIF3L1-202ENST00000409020 RPGRQ92834 1020 aaKnown RBP12.49□□□□□ -0.41
NIF3L1-202ENST00000409020 DDNO94850 711 aaPredicted RBP12.48□□□□□ -0.41
NIF3L1-202ENST00000409020 ALDH1B1P30837 517 aa12.48□□□□□ -0.41
NIF3L1-202ENST00000409020 FKBP4Q02790 459 aaKnown RBP eCLIP12.48□□□□□ -0.41
NIF3L1-202ENST00000409020 SOGA3Q5TF21 947 aa12.48□□□□□ -0.41
NIF3L1-202ENST00000409020 WWC1Q8IX03 1113 aa12.48□□□□□ -0.41
NIF3L1-202ENST00000409020 TAF7LQ5H9L4 462 aa12.48□□□□□ -0.41
NIF3L1-202ENST00000409020 SLC10A5Q5PT55 438 aa12.48□□□□□ -0.41
NIF3L1-202ENST00000409020 ANKRD13DQ6ZTN6 518 aa12.48□□□□□ -0.41
NIF3L1-202ENST00000409020 PLBD2Q8NHP8 589 aa12.48□□□□□ -0.41
NIF3L1-202ENST00000409020 ISCA1Q9BUE6 129 aa12.48□□□□□ -0.41
NIF3L1-202ENST00000409020 TRMT112Q9UI30 125 aaKnown RBP12.48□□□□□ -0.41
NIF3L1-202ENST00000409020 COL4A1P02462 1669 aa12.47□□□□□ -0.41
NIF3L1-202ENST00000409020 ABCC4O15439 1325 aa12.47□□□□□ -0.41
NIF3L1-202ENST00000409020 ZNF541Q9H0D2 1346 aa12.47□□□□□ -0.41
NIF3L1-202ENST00000409020 FANCIQ9NVI1 1328 aa12.47□□□□□ -0.41
NIF3L1-202ENST00000409020 DICER1Q9UPY3 1922 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-202ENST00000409020 PPEF1O14829 653 aaPredicted RBP12.47□□□□□ -0.41
NIF3L1-202ENST00000409020 HSP90AB3PQ58FF7 597 aa12.47□□□□□ -0.41
NIF3L1-202ENST00000409020 RTL5Q5HYW3 569 aaPredicted RBP12.47□□□□□ -0.41
NIF3L1-202ENST00000409020 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
NIF3L1-202ENST00000409020 RBM46Q8TBY0 533 aaKnown RBP12.47□□□□□ -0.41
NIF3L1-202ENST00000409020 HYPKQ9NX55 129 aa12.47□□□□□ -0.41
NIF3L1-202ENST00000409020 LAMB2P55268 1798 aa12.46□□□□□ -0.41
NIF3L1-202ENST00000409020 POTEIP0CG38 1075 aa12.46□□□□□ -0.41
NIF3L1-202ENST00000409020 POTEJP0CG39 1038 aa12.46□□□□□ -0.41
NIF3L1-202ENST00000409020 CALD1Q05682 793 aaKnown RBP12.46□□□□□ -0.41
NIF3L1-202ENST00000409020 FAM89AQ96GI7 184 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms