RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 DPY19L2Q6NUT2 758 aa29.36■■■□□ 2.29
KDELR3-202ENST00000409006 CHPF2Q9P2E5 772 aa29.36■■■□□ 2.29
KDELR3-202ENST00000409006 FKBP4Q02790 459 aaKnown RBP eCLIP29.35■■■□□ 2.29
KDELR3-202ENST00000409006 SLC51AQ86UW1 340 aa29.35■■■□□ 2.29
KDELR3-202ENST00000409006 ZNF277Q9NRM2 450 aaPredicted RBP29.35■■■□□ 2.29
KDELR3-202ENST00000409006 MBIPQ9NS73 344 aa29.35■■■□□ 2.29
KDELR3-202ENST00000409006 SNED1Q8TER0 1413 aa29.35■■■□□ 2.29
KDELR3-202ENST00000409006 HOXA10P31260 410 aaPredicted RBP29.34■■■□□ 2.29
KDELR3-202ENST00000409006 PARP10Q53GL7 1025 aa29.34■■■□□ 2.29
KDELR3-202ENST00000409006 PPP1R42Q7Z4L9 355 aa29.34■■■□□ 2.29
KDELR3-202ENST00000409006 DDNO94850 711 aaPredicted RBP29.33■■■□□ 2.29
KDELR3-202ENST00000409006 ZNF853P0CG23 659 aa29.33■■■□□ 2.29
KDELR3-202ENST00000409006 HTRA3P83110 453 aa29.33■■■□□ 2.29
KDELR3-202ENST00000409006 HDGFL1Q5TGJ6 251 aa29.32■■■□□ 2.28
KDELR3-202ENST00000409006 RPGRQ92834 1020 aaKnown RBP29.32■■■□□ 2.28
KDELR3-202ENST00000409006 UTP14AQ9BVJ6 771 aaKnown RBP29.32■■■□□ 2.28
KDELR3-202ENST00000409006 RTKN2Q8IZC4 609 aa29.31■■■□□ 2.28
KDELR3-202ENST00000409006 DNAJC5GQ8N7S2 189 aa29.31■■■□□ 2.28
KDELR3-202ENST00000409006 SMC1BQ8NDV3 1235 aa29.31■■■□□ 2.28
KDELR3-202ENST00000409006 TAF1P21675 1872 aa29.3■■■□□ 2.28
KDELR3-202ENST00000409006 HOXB7P09629 217 aa29.3■■■□□ 2.28
KDELR3-202ENST00000409006 SLC10A5Q5PT55 438 aa29.3■■■□□ 2.28
KDELR3-202ENST00000409006 DUSP27Q5VZP5 1158 aa29.3■■■□□ 2.28
KDELR3-202ENST00000409006 NLRP10Q86W26 655 aa29.3■■■□□ 2.28
KDELR3-202ENST00000409006 SYNE4Q8N205 404 aa29.3■■■□□ 2.28
KDELR3-202ENST00000409006 ZEB1P37275 1124 aaPredicted RBP29.29■■■□□ 2.28
KDELR3-202ENST00000409006 TCIRG1Q13488 830 aa29.29■■■□□ 2.28
KDELR3-202ENST00000409006 ZNF428Q96B54 188 aa29.29■■■□□ 2.28
KDELR3-202ENST00000409006 HSP90AB3PQ58FF7 597 aa29.28■■■□□ 2.28
KDELR3-202ENST00000409006 RBM17Q96I25 401 aaKnown RBP29.28■■■□□ 2.28
KDELR3-202ENST00000409006 CRAMP1Q96RY5 1269 aa29.28■■■□□ 2.28
KDELR3-202ENST00000409006 NLRP3Q96P20 1036 aa29.27■■■□□ 2.28
KDELR3-202ENST00000409006 SCN4AP35499 1836 aa29.27■■■□□ 2.28
KDELR3-202ENST00000409006 ZNF541Q9H0D2 1346 aa29.26■■■□□ 2.27
KDELR3-202ENST00000409006 DDX60Q8IY21 1712 aaKnown RBP29.26■■■□□ 2.27
KDELR3-202ENST00000409006 COL4A5P29400 1685 aa29.26■■■□□ 2.27
KDELR3-202ENST00000409006 TCERG1O14776 1098 aaKnown RBP29.26■■■□□ 2.27
KDELR3-202ENST00000409006 IARSP41252 1262 aaKnown RBP29.26■■■□□ 2.27
KDELR3-202ENST00000409006 IFT57Q9NWB7 429 aa29.26■■■□□ 2.27
KDELR3-202ENST00000409006 DBF4Q9UBU7 674 aaPredicted RBP29.26■■■□□ 2.27
KDELR3-202ENST00000409006 HCLS1P14317 486 aaPredicted RBP29.24■■■□□ 2.27
KDELR3-202ENST00000409006 PLBD2Q8NHP8 589 aa29.24■■■□□ 2.27
KDELR3-202ENST00000409006 PSMD1Q99460 953 aa29.24■■■□□ 2.27
KDELR3-202ENST00000409006 ELL2O00472 640 aaPredicted RBP29.23■■■□□ 2.27
KDELR3-202ENST00000409006 PPEF1O14829 653 aaPredicted RBP29.23■■■□□ 2.27
KDELR3-202ENST00000409006 POTEIP0CG38 1075 aa29.23■■■□□ 2.27
KDELR3-202ENST00000409006 POTEJP0CG39 1038 aa29.23■■■□□ 2.27
KDELR3-202ENST00000409006 GNAI1P63096 354 aa29.23■■■□□ 2.27
KDELR3-202ENST00000409006 CC2D2BQ6DHV5 1058 aa29.23■■■□□ 2.27
KDELR3-202ENST00000409006 ANKRD13DQ6ZTN6 518 aa29.23■■■□□ 2.27
KDELR3-202ENST00000409006 TRMT112Q9UI30 125 aaKnown RBP29.23■■■□□ 2.27
KDELR3-202ENST00000409006 ABCC4O15439 1325 aa29.21■■■□□ 2.27
KDELR3-202ENST00000409006 RNF123Q5XPI4 1314 aa29.21■■■□□ 2.27
KDELR3-202ENST00000409006 C8orf58Q8NAV2 365 aa29.21■■■□□ 2.27
KDELR3-202ENST00000409006 HYPKQ9NX55 129 aa29.21■■■□□ 2.27
KDELR3-202ENST00000409006 ATP5J2-PTCD1G3V325 749 aa29.2■■■□□ 2.26
KDELR3-202ENST00000409006 FZD9O00144 591 aa29.2■■■□□ 2.26
KDELR3-202ENST00000409006 L3MBTL3Q96JM7 780 aaPredicted RBP29.2■■■□□ 2.26
KDELR3-202ENST00000409006 ISCA1Q9BUE6 129 aa29.2■■■□□ 2.26
KDELR3-202ENST00000409006 SH3TC1Q8TE82 1336 aa29.2■■■□□ 2.26
KDELR3-202ENST00000409006 ZNF316A6NFI3 1004 aaPredicted RBP29.19■■■□□ 2.26
KDELR3-202ENST00000409006 CALD1Q05682 793 aaKnown RBP29.19■■■□□ 2.26
KDELR3-202ENST00000409006 PHAXQ9H814 394 aaKnown RBP29.18■■■□□ 2.26
KDELR3-202ENST00000409006 ATP6V0A2Q9Y487 856 aa29.17■■■□□ 2.26
KDELR3-202ENST00000409006 KLRG1Q96E93 195 aa29.15■■■□□ 2.26
KDELR3-202ENST00000409006 FAM89AQ96GI7 184 aa29.15■■■□□ 2.26
KDELR3-202ENST00000409006 TAF1DQ9H5J8 278 aaPredicted RBP29.15■■■□□ 2.26
KDELR3-202ENST00000409006 GRIPAP1Q4V328 841 aa29.14■■■□□ 2.26
KDELR3-202ENST00000409006 CHADLQ6NUI6 762 aa29.14■■■□□ 2.26
KDELR3-202ENST00000409006 TSPYL6Q8N831 410 aa29.14■■■□□ 2.26
KDELR3-202ENST00000409006 JDP2Q8WYK2 163 aa29.14■■■□□ 2.26
KDELR3-202ENST00000409006 COL4A1P02462 1669 aa29.14■■■□□ 2.26
KDELR3-202ENST00000409006 IQCA1LA6NCM1 817 aa29.13■■■□□ 2.25
KDELR3-202ENST00000409006 TSR2Q969E8 191 aaKnown RBP29.13■■■□□ 2.25
KDELR3-202ENST00000409006 LTBP1Q14766 1721 aa29.12■■■□□ 2.25
KDELR3-202ENST00000409006 ADAMTSL1Q8N6G6 1762 aa29.12■■■□□ 2.25
KDELR3-202ENST00000409006 RTL5Q5HYW3 569 aaPredicted RBP29.12■■■□□ 2.25
KDELR3-202ENST00000409006 LARGE2Q8N3Y3 721 aa29.12■■■□□ 2.25
KDELR3-202ENST00000409006 MRS2Q9HD23 443 aa29.12■■■□□ 2.25
KDELR3-202ENST00000409006 BBOX1O75936 387 aa29.11■■■□□ 2.25
KDELR3-202ENST00000409006 DDX46Q7L014 1031 aaKnown RBP29.11■■■□□ 2.25
KDELR3-202ENST00000409006 RIC3Q7Z5B4 369 aa29.11■■■□□ 2.25
KDELR3-202ENST00000409006 WWC1Q8IX03 1113 aa29.11■■■□□ 2.25
KDELR3-202ENST00000409006 SP8Q8IXZ3 490 aa29.11■■■□□ 2.25
KDELR3-202ENST00000409006 TRIM28Q13263 835 aaKnown RBP29.1■■■□□ 2.25
KDELR3-202ENST00000409006 GRAPQ13588 217 aa29.1■■■□□ 2.25
KDELR3-202ENST00000409006 CCDC27Q2M243 656 aa29.1■■■□□ 2.25
KDELR3-202ENST00000409006 GPC2Q8N158 579 aa29.1■■■□□ 2.25
KDELR3-202ENST00000409006 GRAPLQ8TC17 118 aaPredicted RBP29.1■■■□□ 2.25
KDELR3-202ENST00000409006 HACL1Q9UJ83 578 aa29.1■■■□□ 2.25
KDELR3-202ENST00000409006 LRRC37AA6NMS7 1700 aa29.1■■■□□ 2.25
KDELR3-202ENST00000409006 PPIP5K2O43314 1243 aa29.08■■■□□ 2.25
KDELR3-202ENST00000409006 ANP32CO43423 234 aa29.08■■■□□ 2.25
KDELR3-202ENST00000409006 EPHX2P34913 555 aa29.08■■■□□ 2.25
KDELR3-202ENST00000409006 EIF6P56537 245 aaKnown RBP29.08■■■□□ 2.25
KDELR3-202ENST00000409006 GOLGA2Q08379 1002 aa29.08■■■□□ 2.25
KDELR3-202ENST00000409006 AOC3Q16853 763 aa29.08■■■□□ 2.25
KDELR3-202ENST00000409006 GJA3Q9Y6H8 435 aa29.08■■■□□ 2.25
KDELR3-202ENST00000409006 EAPPQ56P03 285 aaPredicted RBP29.07■■■□□ 2.24
KDELR3-202ENST00000409006 LDHDQ86WU2 507 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms